Information report for AT5G20720
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- root , pollen , guard cell
Literature and News
- Arabidopsis chloroplast chaperonin 10 is a calmodulin-binding protein. DOI: 10.1006/bbrc.2000.3335 ; PMID: 10964710
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Chloroplasts have a novel Cpn10 in addition to Cpn20 as co-chaperonins in Arabidopsis thaliana. DOI: 10.1074/jbc.M102330200 ; PMID: 11402030
- Functional characterization of the higher plant chloroplast chaperonins. DOI: 10.1074/jbc.270.30.18158 ; PMID: 7629128
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Cpn20: siamese twins of the chaperonin world. DOI: 10.1007/s11103-008-9432-3 ; PMID: 19031045
- Significance of the N-terminal domain for the function of chloroplast cpn20 chaperonin. DOI: 10.1074/jbc.M606433200 ; PMID: 17178727
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Differential effects of co-chaperonin homologs on cpn60 oligomers. DOI: 10.1007/s12192-009-0104-2 ; PMID: 19224397
- Chloroplast β chaperonins from A. thaliana function with endogenous cpn10 homologs in vitro. DOI: 10.1007/s11103-011-9797-6 ; PMID: 21633907
- Chaperonin cofactors, Cpn10 and Cpn20, of green algae and plants function as hetero-oligomeric ring complexes. DOI: 10.1074/jbc.M112.365411 ; PMID: 22518837
- Cochaperonin CPN20 negatively regulates abscisic acid signaling in Arabidopsis. DOI: 10.1007/s11103-013-0082-8 ; PMID: 23783410
- Arabidopsis co-chaperonin CPN20 antagonizes Mg-chelatase H subunit to derepress ABA-responsive WRKY40 transcription repressor. DOI: 10.1007/s11427-013-4587-9 ; PMID: 24369350
- Proteomic and biochemical analyses show a functional network of proteins involved in antioxidant defense of the Arabidopsis anp2anp3 double mutant. DOI: 10.1021/pr500588c ; PMID: 25325904
- Chaperonin 20 might be an iron chaperone for superoxide dismutase in activating iron superoxide dismutase (FeSOD). DOI: 10.4161/psb.23074 ; PMID: 23299425
- Functional divergence of chloroplast Cpn60α subunits during Arabidopsis embryo development. DOI: 10.1371/journal.pgen.1007036 ; PMID: 28961247
- Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2. DOI: 10.1126/science.aap9221 ; PMID: 29217567
- Cpn60β4 protein regulates growth and developmental cycling and has bearing on flowering time in Arabidopsis thaliana plants. DOI: 10.1016/j.plantsci.2019.05.022 ; PMID: 31300145
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. DOI: 10.1074/mcp.M700535-MCP200 ; PMID: 18385124
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. DOI: 10.1074/mcp.M700535-MCP200 ; PMID: 18385124
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UDQ4
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UDQ4
- EnsemblPlants: AT5G20720.1, AT5G20720.2, AT5G20720.3
- Gramene: AT5G20720.1, AT5G20720.2, AT5G20720.3
- KEGG: ath:AT5G20720
- Orthologous matrix: DIRVNDY
- ExpressionAtlas: AT5G20720
- InterPro: IPR011032, IPR017416, IPR018369
- PANTHER: PTHR10772, PTHR10772:SF63
- SUPFAM: SSF50129
- PROSITE: PS00681
- Gene3D: 2.30.33.40
- OrthoDB: A0A178UDQ4
- SWISS-MODEL: A0A178UDQ4
- Conserved Domain Database: cd00320
Sequences
cDNA Sequence
- >AT5G20720.3
AGTCTATCTAACTCTCTCTCTACTGCAATTTTTAGGGTTTTATCCTCCGAAAGTCTCAACCTTTTTCTTATCCTCAACAAGGTATCATCACTCACTCTCTTCTCTTTAGCTACCCACTCCCTCTCTCTTCACTGTCTATTCGTATTATAGAAATCCTTTACAACGAGAATTGAATACAAAGGTTTGAACTTTGGGCGGATAAAGTAATCTAGTTCGCTCAATAGTGGTTGGGTTTTACTCTTATTTTGGAGAAATGGCGGCGACTCAACTTACAGCGTCACCAGTGACTATGTCAGCAAGGAGCTTAGCCTCGCTGGATGGTCTCAGAGCTTCGAGTGTCAAGTTTTCATCTTTGAAACCAGGGACCCTTAGACAGAGCCAGTTCCGTCGTTTGGTTGTCAAAGCTGCTTCTGTTGTTGCCCCTAAGTATACTTCAATTAAGCCATTGGGAGATCGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAGAAGACTTTAGGTGGTATCTTACTTCCATCCACTGCTCAATCAAAACCTCAAGGAGGTGAAGTCGTTGCCGTGGGTGAAGGAAGAACTATTGGGAAGAACAAAATTGATATCACTGTCCCTACTGGAGCACAAATTATCTACTCCAAATACGCAGGAACTGAGGTGGAGTTCAATGATGTGAAGCATCTTATCCTCAAGGAAGATGATATTGTTGGCATTCTTGAGACAGAGGACATCAAAGATCTCAAACCTTTGAATGACCGAGTCTTTATTAAGGTTGCTGAGGCGGAGGAGAAAACAGCTGGAGGGTTGTTGTTAACCGAGACTACCAAAGAGAAGCCTTCTATTGGCACGGTGATAGCAGTTGGACCGGGTTCCCTAGACGAGGAAGGTAAAATTACGCCTCTACCAGTATCAACCGGAAGCACAGTACTTTACTCCAAGTATGCTGGTAACGACTTCAAGGGCAAAGATGGTTCCAACTACATTGCCCTCAGAGCTTCAGATGTGATGGCTATACTTTCTTAGTTATGTTATATCTTTGTAATCTGCAACTTGTATCCCAATTGTGGAAATTTTTTCCGTAAACGGCCTGAGCATAATCTGGAATAAAGACTTGAGTTTGAAAATAAAAAAGAATCTTTGTCTGTGAGAGAACTCTTC - >AT5G20720.4
AGTCTATCTAACTCTCTCTCTACTGCAATTTTTAGGGTTTTATCCTCCGAAAGTCTCAACCTTTTTCTTATCCTCAACAAGGTATCATCACTCACTCTCTTCTCTTTAGCTACCCACTCCCTCTCTCTTCACTGTCTATTCGTATTATAGAAATCCTTTACAACGAGAATTGAATACAAAGGTTTGAACTTTGGGCGGATAAAGTAATCTAGTTCGCTCAATAGTGGTTGGGTTTTACTCTTATTTTGGAGAAATGGCGGCGACTCAACTTACAGCGTCACCAGTGACTATGTCAGCAAGGAGCTTAGCCTCGCTGGATGGTCTCAGAGCTTCGAGTGTCAAGTTTTCATCTTTGAAACCAGGGACCCTTAGACAGAGCCAGTTCCGTCGTTTGGTTGTCAAAGCTGCTTCTGTTGTTGCCCCTAAGTATACTTCAATTAAGCCATTGGGAGATCGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAGAAGACTTTAGGTGGTATCTTACTTCCATCCACTGCTCAATCAAAACCTCAAGGAGGTGAAGTCGTTGCCGTGGGTGAAGGAAGAACTATTGGGAAGAACAAAATTGATATCACTGTCCCTACTGGAGCACAAATTATCTACTCCAAATACGCAGGAACTGAGGTGGAGTTCAATGATGTGAAGCATCTTATCCTCAAGGAAGATGATATTGTTGGCATTCTTGAGACAGAGGACATCAAAGATCTCAAACCTTTGAATGACCGAGTCTTTATTAAGGTTGCTGAGGCGGAGGAGAAAACAGCTGGAGGGTTGTTGTTAACCGAGACTACCAAAGAGAAGCCTTCTATTGGCACGGTGATAGCAGTTGGACCGGGTTCCCTAGACGAGGAAGGTAAAATTACGCCTCTACCAGTATCAACCGGAAGCACAGTACTTTACTCCAAGTATGCTGGTAACGACTTCAAGGGCAAAGATGGTTCCAACTACATTGCCCTCAGAGCTTCAGATGTGATGGCTATACTTTCTTAGTTATGTTATATCTTTGTAATCTGCAACTTGTATCCCAATTGTGGAAATTTTTTCCGTAAACGGCCTGAGCATAATCTGGAATAAAGACTTGAGTTTGAAAATAAAAAAGAATCTTTGTCTGTGAGAGAACTCTTC - >AT5G20720.2
AGTCTATCTAACTCTCTCTCTACTGCAATTTTTAGGGTTTTATCCTCCGAAAGTCTCAACCTTTTTCTTATCCTCAACAAGGTATCATCACTCACTCTCTTCTCTTTAGCTACCCACTCCCTCTCTCTTCACTGTCTATTCGTATTATAGAAATCCTTTACAACGAGAATTGAATACAAAGGTTTGAACTTTGGGCGGATAAAGTAATCTAGTTCGCTCAATAGTGGTTGGGTTTTACTCTTATTTTGGAGAAATGGCGGCGACTCAACTTACAGCGTCACCAGTGACTATGTCAGCAAGGAGCTTAGCCTCGCTGGATGGTCTCAGAGCTTCGAGTGTCAAGTTTTCATCTTTGAAACCAGGGACCCTTAGACAGAGCCAGTTCCGTCGTTTGGTTGTCAAAGCTGCTTCTGTTGTTGCCCCTAAGTATACTTCAATTAAGCCATTGGGAGATCGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAGAAGACTTTAGGTGGTATCTTACTTCCATCCACTGCTCAATCAAAACCTCAAGGAGGTGAAGTCGTTGCCGTGGGTGAAGGAAGAACTATTGGGAAGAACAAAATTGATATCACTGTCCCTACTGGAGCACAAATTATCTACTCCAAATACGCAGGAACTGAGGTGGAGTTCAATGATGTGAAGCATCTTATCCTCAAGGAAGATGATATTGTTGGCATTCTTGAGACAGAGGACATCAAAGATCTCAAACCTTTGAATGACCGAGTCTTTATTAAGGTTGCTGAGGCGGAGGAGAAAACAGCTGGAGGGTTGTTGTTAACCGAGACTACCAAAGAGAAGCCTTCTATTGGCACGGTGATAGCAGTTGGACCGGGTTCCCTAGACGAGGAAGGTAAAATTACGCCTCTACCAGTATCAACCGGAAGCACAGTACTTTACTCCAAGTATGCTGGTAACGACTTCAAGGGCAAAGATGGTTCCAACTACATTGCCCTCAGAGCTTCAGATGTGATGGCTATACTTTCTTAGTTATGTTATATCTTTGTAATCTGCAACTTGTATCCCAATTGTGGAAATTTTTTCCGTAAACGGCCTGAGCATAATCTGGAATAAAGACTTGAGTTTGAAAATAAAAAAGAATCTTTGTCTGTGAGAGAACTCTTC - >AT5G20720.1
AGTCTATCTAACTCTCTCTCTACTGCAATTTTTAGGGTTTTATCCTCCGAAAGTCTCAACCTTTTTCTTATCCTCAACAAGGTATCATCACTCACTCTCTTCTCTTTAGCTACCCACTCCCTCTCTCTTCACTGTCTATTCGTATTATAGAAATCCTTTACAACGAGAATTGAATACAAAGGTTTGAACTTTGGGCGGATAAAGTAATCTAGTTCGCTCAATAGTGGTTGGGTTTTACTCTTATTTTGGAGAAATGGCGGCGACTCAACTTACAGCGTCACCAGTGACTATGTCAGCAAGGAGCTTAGCCTCGCTGGATGGTCTCAGAGCTTCGAGTGTCAAGTTTTCATCTTTGAAACCAGGGACCCTTAGACAGAGCCAGTTCCGTCGTTTGGTTGTCAAAGCTGCTTCTGTTGTTGCCCCTAAGTATACTTCAATTAAGCCATTGGGAGATCGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAGAAGACTTTAGGTGGTATCTTACTTCCATCCACTGCTCAATCAAAACCTCAAGGAGGTGAAGTCGTTGCCGTGGGTGAAGGAAGAACTATTGGGAAGAACAAAATTGATATCACTGTCCCTACTGGAGCACAAATTATCTACTCCAAATACGCAGGAACTGAGGTGGAGTTCAATGATGTGAAGCATCTTATCCTCAAGGAAGATGATATTGTTGGCATTCTTGAGACAGAGGACATCAAAGATCTCAAACCTTTGAATGACCGAGTCTTTATTAAGGTTGCTGAGGCGGAGGAGAAAACAGCTGGAGGGTTGTTGTTAACCGAGACTACCAAAGAGAAGCCTTCTATTGGCACGGTGATAGCAGTTGGACCGGGTTCCCTAGACGAGGAAGGTAAAATTACGCCTCTACCAGTATCAACCGGAAGCACAGTACTTTACTCCAAGTATGCTGGTAACGACTTCAAGGGCAAAGATGGTTCCAACTACATTGCCCTCAGAGCTTCAGATGTGATGGCTATACTTTCTTAGTTATGTTATATCTTTGTAATCTGCAACTTGTATCCCAATTGTGGAAATTTTTTCCGTAAACGGCCTGAGCATAATCTGGAATAAAGACTTGAGTTTGAAAATAAAAAAGAATCTTTGTCTGTGAGAGAACTCTTC
CDS Sequence
Protein Sequence