Information report for AT5G20620
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Arabidopsis thaliana contains a large family of germin-like proteins: characterization of cDNA and genomic sequences encoding 12 unique family members. DOI: 10.1023/a:1006038117130 ; PMID: 9869400
- Structure and evolution of genes encoding polyubiquitin and ubiquitin-like proteins in Arabidopsis thaliana ecotype Columbia. DOI: 10.1093/genetics/139.2.921 ; PMID: 7713442
- Recent stable insertion of mitochondrial DNA into an Arabidopsis polyubiquitin gene by nonhomologous recombination. DOI: 10.1105/tpc.5.1.97 ; PMID: 8382544
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. DOI: 10.1093/aob/mcf104 ; PMID: 12102506
- Global and hormone-induced gene expression changes during shoot development in Arabidopsis. DOI: 10.1105/tpc.006668 ; PMID: 12417700
- Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.2002.01479.x ; PMID: 12492830
- The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress. DOI: 10.1046/j.1365-313x.2003.01734.x ; PMID: 12753580
- Profile and analysis of gene expression changes during early development in germinating spores of Ceratopteris richardii. DOI: 10.1104/pp.105.062851 ; PMID: 15965014
- The Arabidopsis mitogen-activated protein kinase kinase MKK3 is upstream of group C mitogen-activated protein kinases and participates in pathogen signaling. DOI: 10.1105/tpc.106.050039 ; PMID: 17933903
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
Gene Resources
- UniProt: A0A178UPB8
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UPB8
- EnsemblPlants: AT5G20620.1
- Gramene: AT5G20620.1
- ExpressionAtlas: AT5G20620
- InterPro: IPR000626, IPR019954, IPR019956
- PANTHER: PTHR10666
- SUPFAM: SSF54236
- PROSITE: PS00299, PS50053
- Gene3D: 3.10.20.90
- OrthoDB: A0A178UPB8
- SWISS-MODEL: A0A178UPB8
- Conserved Domain Database: cd01803
Sequences
cDNA Sequence
- >AT5G20620.1
TATTTTCTAGCGAAGTATTATCTTCTGCTCTGATTCTTCATCTCTCTCACAGAAAAAAGTAAAAAAAAACCTAGATCGCTCTTCACATCTCTTCGAACGATTCTCTCTTTCAAGATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAACATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGGTATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCTGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAATATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCAGACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGAAGCTTCTGAGCTTTTGTGATGTGATCAAAAGTGGTTGTTCGAGTCTCATGCACTTGGGAGGTGAGATCTTCACCTGGTTTGGTTTCTGCTTCGGTCTGCGGGAAAAACTTATCCTTATCGATGTTCTGAAGTTTCATTTTCTGTTTTCTTTTATTTTCTTATGAACCTTTGGTTGCTGTTTCAACTTTTAATAATAATCCAAGTGCATGTTAAAACATTCCGCTTTCTAGAAATTATTATTACCCTAATGTCCA - >AT5G20620.2
TATTTTCTAGCGAAGTATTATCTTCTGCTCTGATTCTTCATCTCTCTCACAGAAAAAAGTAAAAAAAAACCTAGATCGCTCTTCACATCTCTTCGAACGATTCTCTCTTTCAAGATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAACATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGGTATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCTGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAATATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCAGACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGAAGCTTCTGAGCTTTTGTGATGTGATCAAAAGTGGTTGTTCGAGTCTCATGCACTTGGGAGGTGAGATCTTCACCTGGTTTGGTTTCTGCTTCGGTCTGCGGGAAAAACTTATCCTTATCGATGTTCTGAAGTTTCATTTTCTGTTTTCTTTTATTTTCTTATGAACCTTTGGTTGCTGTTTCAACTTTTAATAATAATCCAAGTGCATGTTAAAACATTCCGCTTTCTAGAAATTATTATTACCCTAATGTCCA
CDS Sequence
Protein Sequence