Information report for AT5G20570
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- The F-box: a new motif for ubiquitin dependent proteolysis in cell cycle regulation and signal transduction. DOI: 10.1016/s0079-6107(99)00010-3 ; PMID: 10581972
- The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. DOI: 10.1105/tpc.003368 ; PMID: 12172031
- The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. DOI: 10.1073/pnas.162339999 ; PMID: 12169662
- Role of the Arabidopsis RING-H2 protein RBX1 in RUB modification and SCF function. DOI: 10.1105/tpc.003178 ; PMID: 12215511
- The AtRbx1 protein is part of plant SCF complexes, and its down-regulation causes severe growth and developmental defects. DOI: 10.1074/jbc.M204254200 ; PMID: 12381738
- Multiple ubiquitin ligase-mediated processes require COP9 signalosome and AXR1 function. DOI: 10.1105/tpc.003434 ; PMID: 12368504
- The RUB/Nedd8 conjugation pathway is required for early development in Arabidopsis. DOI: 10.1093/emboj/cdg190 ; PMID: 12682009
- Arabidopsis EIN3-binding F-box 1 and 2 form ubiquitin-protein ligases that repress ethylene action and promote growth by directing EIN3 degradation. DOI: 10.1073/pnas.0401698101 ; PMID: 15090654
- Regulation of flower development in Arabidopsis by SCF complexes. DOI: 10.1104/pp.103.031971 ; PMID: 15047903
- Formation of an SCF(ZTL) complex is required for proper regulation of circadian timing. DOI: 10.1111/j.1365-313X.2004.02207.x ; PMID: 15447654
- Arabidopsis AtCUL3a and AtCUL3b form complexes with members of the BTB/POZ-MATH protein family. DOI: 10.1104/pp.104.052654 ; PMID: 15618422
- Molecular and functional characterization of Arabidopsis Cullin 3A. DOI: 10.1111/j.1365-313X.2004.02302.x ; PMID: 15659098
- Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo. DOI: 10.1105/tpc.105.031989 ; PMID: 15772280
- Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis. DOI: 10.1074/jbc.M413247200 ; PMID: 15749712
- Arabidopsis CULLIN4 Forms an E3 Ubiquitin Ligase with RBX1 and the CDD Complex in Mediating Light Control of Development. DOI: 10.1105/tpc.106.043224 ; PMID: 16844902
- CUL4 associates with DDB1 and DET1 and its downregulation affects diverse aspects of development in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02810.x ; PMID: 16792691
- A new CULLIN 1 mutant has altered responses to hormones and light in Arabidopsis. DOI: 10.1104/pp.106.091439 ; PMID: 17158585
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data. DOI: 10.1021/pr100249c ; PMID: 20687615
- A comprehensive analysis of interaction and localization of Arabidopsis SKP1-like (ASK) and F-box (FBX) proteins. DOI: 10.1371/journal.pone.0050009 ; PMID: 23166809
- The Arabidopsis ALF4 protein is a regulator of SCF E3 ligases. DOI: 10.15252/embj.201797159 ; PMID: 29233834
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: F4K5K1
- EMBL: CP002688
- AlphaFoldDB: F4K5K1
- EnsemblPlants: AT5G20570.3
- Gramene: AT5G20570.3
- ExpressionAtlas: AT5G20570
- InterPro: IPR001841, IPR013083, IPR024766
Sequences
cDNA Sequence
- >AT5G20570.3
TCTCTCTACAACAAAATCAGCGACAGCTCAAACGTTGATATTTTTCTCCGGCTTTTCTAGGGTTTAAATTTTCTTTCCGATCAGAGATTAATGGCGACTCTAGACTCCGACGTTACCATGATTCCTGCCGGAGAAGCCTCCAGCAGCGTAGCCGCGTCGTCTTCCAACAAGAAAGCTAAGCGATTCGAAATTAAGAAGTGGAGCGCCGTTGCTCTCTGGGCTTGGGGTAACCTCGAAAATCCTTATACACTATCTTCAATTGGTCTTTCGATGTTTCGATATATCGTTGTTGACAACTGTGCGATCTGCAGAAACCACATCATGGATCTTTGTATCGAGTGTCAGGCTAATCAGGCCAGTGCCACAAGTGAAGAGTGCACTGTAGCTTGGGGGGTTTGCAATCACGCCTTCCACTTTCACTGCATCAGCAGATGGCTAAAGACTCGTCAAGTTTGTCCATTGGATAACAGTGAGTGGGAGTTTCAGAAATATGGTCACTAAATCAACAAATGGTTCCAGCAAGCATGTGTCTAATCGTGAAGACATCAGGTTCATTTGGTTACCACCGCATATGATAACTAAAGATTGTTCAAGTTTTTGCCCTTTTTTTGGTACTGTATTTTACAATTTGTGGAAACAGAGATTTACTGTTCAGTGTTCACTAAACCTATTATGGTTGTGCTTTGGGTGACGTCTTTGATTTCAAAATTAAAAAGTAAAAATCCTGCAAAGAGTTTTTTACTCGT - >AT5G20570.2
TCTCTCTACAACAAAATCAGCGACAGCTCAAACGTTGATATTTTTCTCCGGCTTTTCTAGGGTTTAAATTTTCTTTCCGATCAGAGATTAATGGCGACTCTAGACTCCGACGTTACCATGATTCCTGCCGGAGAAGCCTCCAGCAGCGTAGCCGCGTCGTCTTCCAACAAGAAAGCTAAGCGATTCGAAATTAAGAAGTGGAGCGCCGTTGCTCTCTGGGCTTGGGGTAACCTCGAAAATCCTTATACACTATCTTCAATTGGTCTTTCGATGTTTCGATATATCGTTGTTGACAACTGTGCGATCTGCAGAAACCACATCATGGATCTTTGTATCGAGTGTCAGGCTAATCAGGCCAGTGCCACAAGTGAAGAGTGCACTGTAGCTTGGGGGGTTTGCAATCACGCCTTCCACTTTCACTGCATCAGCAGATGGCTAAAGACTCGTCAAGTTTGTCCATTGGATAACAGTGAGTGGGAGTTTCAGAAATATGGTCACTAAATCAACAAATGGTTCCAGCAAGCATGTGTCTAATCGTGAAGACATCAGGTTCATTTGGTTACCACCGCATATGATAACTAAAGATTGTTCAAGTTTTTGCCCTTTTTTTGGTACTGTATTTTACAATTTGTGGAAACAGAGATTTACTGTTCAGTGTTCACTAAACCTATTATGGTTGTGCTTTGGGTGACGTCTTTGATTTCAAAATTAAAAAGTAAAAATCCTGCAAAGAGTTTTTTACTCGT - >AT5G20570.1
TCTCTCTACAACAAAATCAGCGACAGCTCAAACGTTGATATTTTTCTCCGGCTTTTCTAGGGTTTAAATTTTCTTTCCGATCAGAGATTAATGGCGACTCTAGACTCCGACGTTACCATGATTCCTGCCGGAGAAGCCTCCAGCAGCGTAGCCGCGTCGTCTTCCAACAAGAAAGCTAAGCGATTCGAAATTAAGAAGTGGAGCGCCGTTGCTCTCTGGGCTTGGGGTAACCTCGAAAATCCTTATACACTATCTTCAATTGGTCTTTCGATGTTTCGATATATCGTTGTTGACAACTGTGCGATCTGCAGAAACCACATCATGGATCTTTGTATCGAGTGTCAGGCTAATCAGGCCAGTGCCACAAGTGAAGAGTGCACTGTAGCTTGGGGGGTTTGCAATCACGCCTTCCACTTTCACTGCATCAGCAGATGGCTAAAGACTCGTCAAGTTTGTCCATTGGATAACAGTGAGTGGGAGTTTCAGAAATATGGTCACTAAATCAACAAATGGTTCCAGCAAGCATGTGTCTAATCGTGAAGACATCAGGTTCATTTGGTTACCACCGCATATGATAACTAAAGATTGTTCAAGTTTTTGCCCTTTTTTTGGTACTGTATTTTACAATTTGTGGAAACAGAGATTTACTGTTCAGTGTTCACTAAACCTATTATGGTTGTGCTTTGGGTGACGTCTTTGATTTCAAAATTAAAAAGTAAAAATCCTGCAAAGAGTTTTTTACTCGT
CDS Sequence
Protein Sequence