Information report for AT5G20040
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- atipt2 atipt 9 — Levels of iP-type and tZ-type cytokinins are unaffected in this mutant.
- atipt2 atipt 9 — This mutant can be chlorotic.
- atipt2 atipt 9 — cZR and cZRMP are almost undetectable in this mutant.
- atipt9-1 — Levels of cZR and cZRMP are reduced in this mutant compared to those of wild type.
- atipt9-1 — Levels of iP-type and tZ-type cytokinins are unaffected in this mutant.
- atipt9-1 — The levels of iPR contained in tRNA are decreased to 4% of those found in wild type.
- atipt9-1 — This mutant can be chlorotic.
Functional Keywords
Literature and News
- Identification of genes encoding adenylate isopentenyltransferase, a cytokinin biosynthesis enzyme, in Arabidopsis thaliana. DOI: 10.1074/jbc.M102130200 ; PMID: 11313355
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(03)01194-3 ; PMID: 14623097
- Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades. DOI: 10.1111/j.1365-313X.2005.02530.x ; PMID: 16212609
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Roles of Arabidopsis ATP/ADP isopentenyltransferases and tRNA isopentenyltransferases in cytokinin biosynthesis. DOI: 10.1073/pnas.0603522103 ; PMID: 17062755
- Modulation of the hormone setting by Rhodococcus fascians results in ectopic KNOX activation in Arabidopsis. DOI: 10.1104/pp.107.113969 ; PMID: 18184732
- Expression of cytokinin biosynthetic isopentenyltransferase genes in Arabidopsis: tissue specificity and regulation by auxin, cytokinin, and nitrate. DOI: 10.1046/j.1365-313x.2003.01945.x ; PMID: 14675438
Gene Resources
- UniProt: A0A654G2Q2
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A654G2Q2
- EnsemblPlants: AT5G20040.1
- Gramene: AT5G20040.1
- KEGG: ath:AT5G20040
- ExpressionAtlas: AT5G20040
- InterPro: IPR018022, IPR027417, IPR039657
- PANTHER: PTHR11088, PTHR11088:SF60
- SUPFAM: SSF52540
- Gene3D: 1.10.20.140, 3.40.50.300
- OrthoDB: A0A654G2Q2
- SWISS-MODEL: A0A654G2Q2
Sequences
cDNA Sequence
- >AT5G20040.1
GCTTGTTCGGTTTATGTGTAAACCTAACCGAACCGTAGTTCTCTAATCCCTTGCTCACTGTCTTCGTCTCTCTTCGAGATGAGCTTTCGCGCGGGTCGTCCTCCTTCCCTTCTATCAACCTCAGTATATCCGTAGCAAACTTGTGCTATCTTCCAAATTCTAAATTTCAAAGCTTCGTTATCCGTTTATAATGGTGATTGGCAGTGGCGTATTTTTGACCCGTACCTGTTACTTGAGACTTCAACCGCCAAGCCTTGTACTGCGCCGGAGATTCTGCGCAGCCACCACGGCCTGCTCTGTTCCTCTGAACGGGAACAAGAAGAAAAAGTCTGAAAAGGAGAAGGTGATTGTGATTTCTGGGCCCACCGGCGCAGGAAAGAGCAGACTTGCCATGGAGCTCGCTAAGCGACTCAATGGCGAAATCATCAGTGCTGACTCCGTTCAGGTGTATAAAGGCCTTGATGTTGGATCAGCCAAGCCATCAGATAGCGATAGAAAGGTGGTGCCTCATCATCTTATCGACATTTTGCATCCGTCTCAAGACTACTCTGTGGGGCAATTTTATGATGATGGAAGGCAAGCTACCAAAGATATTCTTAATAGAGGGCGTGTTCCCATTGTTACGGGTGGAACTGGATTGTATCTGCGATGGTTTATGTATGGGAAGCCGGATGTGCCTAAACCTTCTCCAGAAGTTATCGCTGAGGCCCATGATATGCTAGTTGGTTTTCAAACCGAATATAACTGGGACGCAGCTGTGGAGTTGGTGGTCAATGCTGGTGATCCAAAAGCTTCTTCTTTACCTCGTAATGATTGGTACAGACTACGCCGTAGCCTCGAGATACTCAAGTCAACTGGATCGCCTCCGTCTTCCTTTCGCATTCCTTATGATTCCTTTCGAGTAAATTTAGTTGCTCCTGATGCTGATGACTTCCTTGAGGACGGTTCATCTGCCGATATCTCTATCCAAAACATAGAGACAGATTTGGACTATGACTTTCTTTGTTTTTTCTTGTCAAGCCCACGGGTTGCTCTCTACAGATCTATTGATTTCAGATGTGAAGACATGCTTTCAGGACCCAATGGAGTTTTGTCAGAAGCTAGATGGCTTCTTGATCTTGGTCTTCTTCCAAACTCAAATCCTGCAACTCGTGCCATTGGGTACAGACAGGCCATGGAATATCTATTACAATGTCGTCGATATGAGGGCGAAAGTTCCCCTAGAGAATTTTATGCTTTCTTGAACAAATTTCAGACAGCATCCAGAAACTTTGCAAAAAGGCAAATGACATGGTTCCGGTGTGAGCCTATGTACCACTGGCTCAATGCTTCCAAACCTCTGGATTCAATACTTCAATGCATATACGATGCTTATGAGAGCGAAGCAGAGATGGTGGAGATACCGGAGTCTCTAAGAATGAGCAAAGACGTAAGAGATTCTCGAGAAGCTTCTGAACTAAAGGGGTATCGCTCCAAAAACAGGCATTTCGTAAGACGAGAGGACTGTTCTTCGGTGTTAGAATGGATCAGGAGTGAAGGATGTAAGAGTGAAGCTTCATGCGTGGAAAGCGCAATAGCATAAACACTGCTTCATTTTATCCGGAAAAGCCAAAACCAAAACCAAAACAAAAGTGTGTTTTGCTTATAAACTTTTTACGAGTAGACAAGATTTTGGATCATGTTCTTGAGTACACGTATGAAGAAAATATTGCACACCCTTCTTTATTCATGAGCTCATACAATTAGGAAGCAATAATGATTTCCAAAAAAGAGAAATTCAAAAGTTGTAAAATCTTATGAACCATTAGGAGTCGCATTCA - >AT5G20040.2
GCTTGTTCGGTTTATGTGTAAACCTAACCGAACCGTAGTTCTCTAATCCCTTGCTCACTGTCTTCGTCTCTCTTCGAGATGAGCTTTCGCGCGGGTCGTCCTCCTTCCCTTCTATCAACCTCAGTATATCCGTAGCAAACTTGTGCTATCTTCCAAATTCTAAATTTCAAAGCTTCGTTATCCGTTTATAATGGTGATTGGCAGTGGCGTATTTTTGACCCGTACCTGTTACTTGAGACTTCAACCGCCAAGCCTTGTACTGCGCCGGAGATTCTGCGCAGCCACCACGGCCTGCTCTGTTCCTCTGAACGGGAACAAGAAGAAAAAGTCTGAAAAGGAGAAGGTGATTGTGATTTCTGGGCCCACCGGCGCAGGAAAGAGCAGACTTGCCATGGAGCTCGCTAAGCGACTCAATGGCGAAATCATCAGTGCTGACTCCGTTCAGGTGTATAAAGGCCTTGATGTTGGATCAGCCAAGCCATCAGATAGCGATAGAAAGGTGGTGCCTCATCATCTTATCGACATTTTGCATCCGTCTCAAGACTACTCTGTGGGGCAATTTTATGATGATGGAAGGCAAGCTACCAAAGATATTCTTAATAGAGGGCGTGTTCCCATTGTTACGGGTGGAACTGGATTGTATCTGCGATGGTTTATGTATGGGAAGCCGGATGTGCCTAAACCTTCTCCAGAAGTTATCGCTGAGGCCCATGATATGCTAGTTGGTTTTCAAACCGAATATAACTGGGACGCAGCTGTGGAGTTGGTGGTCAATGCTGGTGATCCAAAAGCTTCTTCTTTACCTCGTAATGATTGGTACAGACTACGCCGTAGCCTCGAGATACTCAAGTCAACTGGATCGCCTCCGTCTTCCTTTCGCATTCCTTATGATTCCTTTCGAGTAAATTTAGTTGCTCCTGATGCTGATGACTTCCTTGAGGACGGTTCATCTGCCGATATCTCTATCCAAAACATAGAGACAGATTTGGACTATGACTTTCTTTGTTTTTTCTTGTCAAGCCCACGGGTTGCTCTCTACAGATCTATTGATTTCAGATGTGAAGACATGCTTTCAGGACCCAATGGAGTTTTGTCAGAAGCTAGATGGCTTCTTGATCTTGGTCTTCTTCCAAACTCAAATCCTGCAACTCGTGCCATTGGGTACAGACAGGCCATGGAATATCTATTACAATGTCGTCGATATGAGGGCGAAAGTTCCCCTAGAGAATTTTATGCTTTCTTGAACAAATTTCAGACAGCATCCAGAAACTTTGCAAAAAGGCAAATGACATGGTTCCGGTGTGAGCCTATGTACCACTGGCTCAATGCTTCCAAACCTCTGGATTCAATACTTCAATGCATATACGATGCTTATGAGAGCGAAGCAGAGATGGTGGAGATACCGGAGTCTCTAAGAATGAGCAAAGACGTAAGAGATTCTCGAGAAGCTTCTGAACTAAAGGGGTATCGCTCCAAAAACAGGCATTTCGTAAGACGAGAGGACTGTTCTTCGGTGTTAGAATGGATCAGGAGTGAAGGATGTAAGAGTGAAGCTTCATGCGTGGAAAGCGCAATAGCATAAACACTGCTTCATTTTATCCGGAAAAGCCAAAACCAAAACCAAAACAAAAGTGTGTTTTGCTTATAAACTTTTTACGAGTAGACAAGATTTTGGATCATGTTCTTGAGTACACGTATGAAGAAAATATTGCACACCCTTCTTTATTCATGAGCTCATACAATTAGGAAGCAATAATGATTTCCAAAAAAGAGAAATTCAAAAGTTGTAAAATCTTATGAACCATTAGGAGTCGCATTCA - >AT5G20040.3
GCTTGTTCGGTTTATGTGTAAACCTAACCGAACCGTAGTTCTCTAATCCCTTGCTCACTGTCTTCGTCTCTCTTCGAGATGAGCTTTCGCGCGGGTCGTCCTCCTTCCCTTCTATCAACCTCAGTATATCCGTAGCAAACTTGTGCTATCTTCCAAATTCTAAATTTCAAAGCTTCGTTATCCGTTTATAATGGTGATTGGCAGTGGCGTATTTTTGACCCGTACCTGTTACTTGAGACTTCAACCGCCAAGCCTTGTACTGCGCCGGAGATTCTGCGCAGCCACCACGGCCTGCTCTGTTCCTCTGAACGGGAACAAGAAGAAAAAGTCTGAAAAGGAGAAGGTGATTGTGATTTCTGGGCCCACCGGCGCAGGAAAGAGCAGACTTGCCATGGAGCTCGCTAAGCGACTCAATGGCGAAATCATCAGTGCTGACTCCGTTCAGGTGTATAAAGGCCTTGATGTTGGATCAGCCAAGCCATCAGATAGCGATAGAAAGGTGGTGCCTCATCATCTTATCGACATTTTGCATCCGTCTCAAGACTACTCTGTGGGGCAATTTTATGATGATGGAAGGCAAGCTACCAAAGATATTCTTAATAGAGGGCGTGTTCCCATTGTTACGGGTGGAACTGGATTGTATCTGCGATGGTTTATGTATGGGAAGCCGGATGTGCCTAAACCTTCTCCAGAAGTTATCGCTGAGGCCCATGATATGCTAGTTGGTTTTCAAACCGAATATAACTGGGACGCAGCTGTGGAGTTGGTGGTCAATGCTGGTGATCCAAAAGCTTCTTCTTTACCTCGTAATGATTGGTACAGACTACGCCGTAGCCTCGAGATACTCAAGTCAACTGGATCGCCTCCGTCTTCCTTTCGCATTCCTTATGATTCCTTTCGAGTAAATTTAGTTGCTCCTGATGCTGATGACTTCCTTGAGGACGGTTCATCTGCCGATATCTCTATCCAAAACATAGAGACAGATTTGGACTATGACTTTCTTTGTTTTTTCTTGTCAAGCCCACGGGTTGCTCTCTACAGATCTATTGATTTCAGATGTGAAGACATGCTTTCAGGACCCAATGGAGTTTTGTCAGAAGCTAGATGGCTTCTTGATCTTGGTCTTCTTCCAAACTCAAATCCTGCAACTCGTGCCATTGGGTACAGACAGGCCATGGAATATCTATTACAATGTCGTCGATATGAGGGCGAAAGTTCCCCTAGAGAATTTTATGCTTTCTTGAACAAATTTCAGACAGCATCCAGAAACTTTGCAAAAAGGCAAATGACATGGTTCCGGTGTGAGCCTATGTACCACTGGCTCAATGCTTCCAAACCTCTGGATTCAATACTTCAATGCATATACGATGCTTATGAGAGCGAAGCAGAGATGGTGGAGATACCGGAGTCTCTAAGAATGAGCAAAGACGTAAGAGATTCTCGAGAAGCTTCTGAACTAAAGGGGTATCGCTCCAAAAACAGGCATTTCGTAAGACGAGAGGACTGTTCTTCGGTGTTAGAATGGATCAGGAGTGAAGGATGTAAGAGTGAAGCTTCATGCGTGGAAAGCGCAATAGCATAAACACTGCTTCATTTTATCCGGAAAAGCCAAAACCAAAACCAAAACAAAAGTGTGTTTTGCTTATAAACTTTTTACGAGTAGACAAGATTTTGGATCATGTTCTTGAGTACACGTATGAAGAAAATATTGCACACCCTTCTTTATTCATGAGCTCATACAATTAGGAAGCAATAATGATTTCCAAAAAAGAGAAATTCAAAAGTTGTAAAATCTTATGAACCATTAGGAGTCGCATTCA
CDS Sequence
Protein Sequence