Gene Details:

• Gene ID: AT5G19730
• Gene Symbol: PME53
• Gene Name:
• Description: Pectin lyase-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2183214
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G19730.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)

Gene Ontology:

• GO:0009505  — located in — plant-type cell wall
• GO:0045490  — involved in — pectin catabolic process
• GO:0010588  — involved in — cotyledon vascular tissue pattern formation
• GO:0009737  — involved in — response to abscisic acid
• GO:0005737  — located in — cytoplasm
• GO:0030599  — enables — pectinesterase activity
• GO:0042545  — involved in — cell wall modification
• GO:0009408  — involved in — response to heat
• GO:0009507  — located in — chloroplast
• GO:0048046  — located in — apoplast

Germplasm Phenotype:

• SALK_150305C  — Reduction in pectin methylesterase activity; rosette leaf width to length ratio smaller; size of cotyledon was smaller and shorter; stomata lengths were longer and wider; higher stomatal density, descreased stomatal aperture.

Function-related keywords:

• root ,  flower

Literature:

• Pectin methylesterases: sequence-structural features and phylogenetic relationships.   DOI:  10.1016/j.carres.2004.06.023 ;  PMID:  15337457
• High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions.   DOI:  10.1111/j.1365-313X.2004.02281.x ;  PMID:  15610358
• Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry.   DOI:  10.1093/pcp/pci033 ;  PMID:  15695462
• Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana.   DOI:  10.1007/s00425-006-0261-9 ;  PMID:  16622707
• The Populus homeobox gene ARBORKNOX1 reveals overlapping mechanisms regulating the shoot apical meristem and the vascular cambium.   DOI:  10.1007/s11103-006-0059-y ;  PMID:  16927204
• Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis.   DOI:  10.1007/s00425-007-0530-2 ;  PMID:  17497164
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA.   DOI:  10.1104/pp.110.167718 ;  PMID:  21245191
• Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana.   DOI:  10.1007/s00425-006-0261-9 ;  PMID:  16622707

Sequences: