Information report for AT5G19540
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0010027 — acts upstream of or within — thylakoid membrane organization
- GO:0009507 — located in — chloroplast
- GO:0009570 — located in — chloroplast stroma
- GO:0003674 — enables — molecular_function
- SALK_015620c — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:increased,cold:no change,oxidative stress:decreased,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:no change.
- dy1-1 — Seedlings are yellow and defective in de-detiolation.Vegetative growth is severely retarded. Juvenile true leaves have defects in their pigmentation.At an ultrastructural level, mutant thylakoid membranes are more loosely packed.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Large-scale identification of leaf senescence-associated genes. DOI: 10.1046/j.1365-313x.2003.01908.x ; PMID: 14617064
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
Gene Resources
- UniProt: Q949W7
- EMBL: AY050845, AY084879, AY133822
- AlphaFoldDB: Q949W7
- EnsemblPlants: AT5G19540.1, AT5G19540.2
- Gramene: AT5G19540.1, AT5G19540.2
- KEGG: ath:AT5G19540
- Orthologous matrix: YEKRLPW
- ExpressionAtlas: AT5G19540
- PANTHER: PTHR35757, PTHR35757:SF1
Sequences
cDNA Sequence
- >AT5G19540.2
ATTTTTTTTTGTGGCCGAAGTAGAAACGTGTAAACTTCCTCTGGTTGAAAAATGGCGAAATATCTTCTCCACATCACACACTAGTTCTTCTTCTGCTCAATCTCAACTATCCCGTAAAACAAAAACGAGGGAGGAACCATGGCGGTGAGCTCATTCGCCGTCCTTCCTCCATTTGGTTCCTCATACAGCTCCACAACCGATAGATCTTCTTCTTCTTCGTTTTACTCATCTTCGAAACTTCTCCGCATATCTCAATACCGGTTCCAGTCAAATTCCCGTTGTCCAAATGTGTTCGTCTCGTGCTCACTGAATCAGCCTTCTGATGATGCTTCCGACGCCGCCCTTTTTCTCGAATCCAATTCAATTGCTGATTACATGCGGTTCAAACGCCGTCCCGACCCCGGAAATGGTACCAGCGAGTTGCAGACTGCAATCGTGAGTTACAAGAAACGTTTCCCTTGGATTCTTCTCAACCCTTTTCTTCAGGTGGATTTGGTCTCAACTATTCATATTGCAGATAAAGAGTACTTCACAACTCTTCAGAAGGAGCTTGAACCATATGATTCTATCTTGTATGAGATGGTGGCTAGTAAAGAGACCTTGGAAAACAGGAGAAACCCTATTGCATCTAAGAGGCTCAAGAGTTCTCGTTCAAGAGGTTTCAGTATTCTTGGGTTCATTCAGCGGCAGATGGCAAGAGTACTAACACTTGATTTTCAGCTAGATTGTCTAGATTACGATACTGAGAATTGGTACCATGCTGATCTCGATTTCGAGACATTCCAGTTGCTTCAGAAGGAGAAAGGAGAAAGCTTCTTCTCATTTGCCAGGGACATGACTATTAGATCAACAAAAGCAATGATACAGCCAGCTTTGGTAACTGAAGGTCGTGATACTTGGAGGTCAAAGCTTCTATGGGTTTCACGGGTTTTTCCTATGCCTCTTGTGGGTCTTTTCCTAATCGGGGCTTTTTGTGCTGACTTTGGAGATCAGACCTCAGACTATCCAGAATTAGAAGCACTTTCACGGCTTGACTTTGGAGCTGCTATGAAGGTTTTCCTTGCTAAGAGATTGACATCCGAGCTAACACTAGAGACATCAGATATAGAGGAAAAATCTGTCATCATTGGTGAGAGAAACCGAGCAGCTACGGAAGCTTTAAGAAGAGCAATAGAGCAAGGACACAAGAGAATTGGAATTCTATATGGCGGAGGCCACATGCCCGACCTGGGAAGACGACTGAGAGAAGAGTTTGATCTTGTTCCTTCAGAGGTAAGATGGGTAACAGCTTGGTCCATCAGAAATCCAACGGACTTGGAGACTAGTTCATATCCGATTCTGAGGAAAATGGCAGAGGCTTTGCGTTGGCCACTAAACCGGTACCAAACATTGGCATTGCTAATATTTTCATCTGTACTTGCACTGGATCTCTGCTTTTGGGAGCTCTTCTTTGGTTCGACAATTGACTGGGCTACCCAGATAGGTGCAGAGTTATACCAGTTTATAGATAATACAAAAATTGTATGACGCAGCACAGAATCATGTACAAACAGTGTCAAATACCTTTTACAGTGTCCCAAGTCTCTCTGTTGTAAAGCAAACATGGCTCTGATGTCAAAGAAATCTATTGAATAGGTAACTCTAGTTGTTTTTGGTTTGATGATAATGTTTTTATGAAGAAAAAAAAATTACTTAATAAATGGAAATTAGAATTCAGAC - >AT5G19540.1
ATTTTTTTTTGTGGCCGAAGTAGAAACGTGTAAACTTCCTCTGGTTGAAAAATGGCGAAATATCTTCTCCACATCACACACTAGTTCTTCTTCTGCTCAATCTCAACTATCCCGTAAAACAAAAACGAGGGAGGAACCATGGCGGTGAGCTCATTCGCCGTCCTTCCTCCATTTGGTTCCTCATACAGCTCCACAACCGATAGATCTTCTTCTTCTTCGTTTTACTCATCTTCGAAACTTCTCCGCATATCTCAATACCGGTTCCAGTCAAATTCCCGTTGTCCAAATGTGTTCGTCTCGTGCTCACTGAATCAGCCTTCTGATGATGCTTCCGACGCCGCCCTTTTTCTCGAATCCAATTCAATTGCTGATTACATGCGGTTCAAACGCCGTCCCGACCCCGGAAATGGTACCAGCGAGTTGCAGACTGCAATCGTGAGTTACAAGAAACGTTTCCCTTGGATTCTTCTCAACCCTTTTCTTCAGGTGGATTTGGTCTCAACTATTCATATTGCAGATAAAGAGTACTTCACAACTCTTCAGAAGGAGCTTGAACCATATGATTCTATCTTGTATGAGATGGTGGCTAGTAAAGAGACCTTGGAAAACAGGAGAAACCCTATTGCATCTAAGAGGCTCAAGAGTTCTCGTTCAAGAGGTTTCAGTATTCTTGGGTTCATTCAGCGGCAGATGGCAAGAGTACTAACACTTGATTTTCAGCTAGATTGTCTAGATTACGATACTGAGAATTGGTACCATGCTGATCTCGATTTCGAGACATTCCAGTTGCTTCAGAAGGAGAAAGGAGAAAGCTTCTTCTCATTTGCCAGGGACATGACTATTAGATCAACAAAAGCAATGATACAGCCAGCTTTGGTAACTGAAGGTCGTGATACTTGGAGGTCAAAGCTTCTATGGGTTTCACGGGTTTTTCCTATGCCTCTTGTGGGTCTTTTCCTAATCGGGGCTTTTTGTGCTGACTTTGGAGATCAGACCTCAGACTATCCAGAATTAGAAGCACTTTCACGGCTTGACTTTGGAGCTGCTATGAAGGTTTTCCTTGCTAAGAGATTGACATCCGAGCTAACACTAGAGACATCAGATATAGAGGAAAAATCTGTCATCATTGGTGAGAGAAACCGAGCAGCTACGGAAGCTTTAAGAAGAGCAATAGAGCAAGGACACAAGAGAATTGGAATTCTATATGGCGGAGGCCACATGCCCGACCTGGGAAGACGACTGAGAGAAGAGTTTGATCTTGTTCCTTCAGAGGTAAGATGGGTAACAGCTTGGTCCATCAGAAATCCAACGGACTTGGAGACTAGTTCATATCCGATTCTGAGGAAAATGGCAGAGGCTTTGCGTTGGCCACTAAACCGGTACCAAACATTGGCATTGCTAATATTTTCATCTGTACTTGCACTGGATCTCTGCTTTTGGGAGCTCTTCTTTGGTTCGACAATTGACTGGGCTACCCAGATAGGTGCAGAGTTATACCAGTTTATAGATAATACAAAAATTGTATGACGCAGCACAGAATCATGTACAAACAGTGTCAAATACCTTTTACAGTGTCCCAAGTCTCTCTGTTGTAAAGCAAACATGGCTCTGATGTCAAAGAAATCTATTGAATAGGTAACTCTAGTTGTTTTTGGTTTGATGATAATGTTTTTATGAAGAAAAAAAAATTACTTAATAAATGGAAATTAGAATTCAGAC
CDS Sequence
Protein Sequence