Gene Details:
- Gene ID: AT5G19530
- Gene Symbol: ACL5
- Gene Name: ACAULIS 5
- Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
- TAIR Accession: locus:2180816
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025275 — procambium — procambio (Spanish, exact), 前形成層 (Japanese, exact)
Gene Ontology:
- GO:0006596 — involved in — polyamine biosynthetic process
- GO:0010487 — enables — thermospermine synthase activity
- GO:0010087 — acts upstream of or within — phloem or xylem histogenesis
- GO:0005634 — located in — nucleus
- GO:0016768 — enables — spermine synthase activity
- GO:0005737 — located in — cytoplasm
- GO:0048759 — acts upstream of or within — xylem vessel member cell differentiation
- GO:0009926 — acts upstream of or within — auxin polar transport
- GO:0009826 — acts upstream of or within — unidimensional cell growth
Germplasm Phenotype:
- acl5 — Reduced cell expansion
- acl5-1 — Negative effects of the mutation on cell elongation are also detectable in pedicels, siliques and petioles of rosette leaves after transition to reproductive growth.
- acl5-1 — The cortical microtubules of epidermal cells in the mutant internodes tend to form a more longitudinal array than those in the wild-type internodes.
- acl5-1 — The mutant initiates vegetative growth and the transition to the inflorescence meristem in the same manner as the wild-type, but produces extremely short flowering stems. This phenotype is primarily due to a reduced cell length in the internodes.
- acl5-1/sac52-d — Double mutant shows increase in growth of 68% relative to acl5-1 single mutant. Also restores normal liginification.
- acl5-3 — Same phenotype as acl5-1.
- acl5-4 — Same phenotype as acl5-1.
- tkv — Increased thickness of major veins in juvenile and adult rosette leaves. Adult rosette leaves are smaller and have more veins per square area than those of wild type. Increased vein thickness is attributable to an increased number of both xylem and phloem cells as well as an increased number of procambial cells in between. Polar auxin transport in mutant stems is 66.2% of that in wild type. Mutants are fully fertile and produce normal flowers.
Function-related keywords:
Literature:
- Expression of endoxyloglucan transferase genes in acaulis mutants of Arabidopsis. DOI: 10.1104/pp.121.3.715 ; PMID: 10557219
- ACL5: an Arabidopsis gene required for internodal elongation after flowering. DOI: 10.1046/j.1365-313x.1997.12040863.x ; PMID: 9375398
- Characterization of the spermidine synthase-related gene family in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(02)03217-9 ; PMID: 12220656
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A semi-dominant mutation in the ribosomal protein L10 gene suppresses the dwarf phenotype of the acl5 mutant in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03647.x ; PMID: 18694459
- Phloem-specific expression of Yang cycle genes and identification of novel Yang cycle enzymes in Plantago and Arabidopsis. DOI: 10.1105/tpc.110.079657 ; PMID: 21540433
- A chemical biology approach reveals an opposite action between thermospermine and auxin in xylem development in Arabidopsis thaliana. DOI: 10.1093/pcp/pcs017 ; PMID: 22345435
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- Negative feedback regulation of auxin signaling by ATHB8/ACL5-BUD2 transcription module. DOI: 10.1093/mp/ssu051 ; PMID: 24777988
- The SAC51 Family Plays a Central Role in Thermospermine Responses in Arabidopsis. DOI: 10.1093/pcp/pcw113 ; PMID: 27388339
- A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem. DOI: 10.1016/j.cub.2015.10.051 ; PMID: 26616019
- Thermospermine enhances translation of SAC51 and SACL1 in Arabidopsis. DOI: 10.1080/15592324.2016.1276685 ; PMID: 28045577
- Loss of function of an Arabidopsis homologue of JMJD6 suppresses the dwarf phenotype of acl5, a mutant defective in thermospermine biosynthesis. DOI: 10.1002/1873-3468.14470 ; PMID: 35962471
- SnoRNP is essential for thermospermine-mediated development in Arabidopsis thaliana. DOI: 10.1007/s11427-022-2235-4 ; PMID: 36385591
- Profiling of Single-cell-type-specific MicroRNAs in Arabidopsis Roots by Immunoprecipitation of Root Cell-layer-specific GFP-AGO1. DOI: 10.21769/BioProtoc.4575 ; PMID: 36618096
Sequences:
cDNA Sequence
- >AT5G19530.2
AAAATGCCAAAATATAAGCATGCGACGGAATTTTGGCAGAAGATTGTAGAGTTGTAATCTGTCGCAATCATTACTCATGCTAGCATTTTTCATTTTCCCTTCATTTGTGGATAACGCACGATATAACATTCTACACACCAACAAGATTCTATAAAAACGCAAAGCCGTAGAGGTCATGTTCGGAAATGGGTTCCCGGAGATTCACAAAGCCACATCACCCACTCAAACCCTCCACTCTAACCAGCAAGACTGCCATTGGTATGAAGAAACCATCGATGATGATCTCAAGTGGTCTTTTGCCCTCAACAGTGTTCTCCATCAAGGAACTAGTGAGTACCAAGATATTGCTCTGTTGGACACCAAACGTTTTGGAAAGGTGCTTGTGATTGATGGGAAAATGCAAAGTGCTGAGAGAGATGAGTTTATCTACCATGAATGTTTGATCCATCCCGCTCTCCTTTTCCATCCCAACCCCAAGACTGTGTTTATAATGGGAGGAGGTGAAGGCTCTGCTGCAAGAGAAATACTAAAACACACGACGATCGAGAAAGTTGTTATGTGTGATATTGATCAGGAAGTTGTTGATTTTTGCAGAAGATTTCTGACCGTTAACAGCGATGCTTTCTGTAACAAAAAGCTTGAACTTGTGATCAAAGATGCAAAGGCTGAATTAGAGAAAAGGGAAGAGAAGTTTGATATCATAGTGGGAGATTTAGCTGATCCAGTGGAAGGTGGACCTTGTTATCAGCTCTACACCAAATCCTTCTACCAAAACATTCTCAAACCCAAGCTTAGCCCTAATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGAATATTCACTCATAAGGAAGTCTTCACATCAATCTACAACACCATGAAGCAAGTCTTCAAGTACGTGAAGGCTTACACAGCACATGTGCCATCATTTGCGGACACATGGGGATGGGTGATGGCATCGGACCACGAGTTTGACGTTGAAGTTGATGAAATGGATCGAAGAATCGAAGAGAGAGTTAACGGAGAATTGATGTATCTAAACGCTCCTTCTTTCGTCTCTGCTGCTACTCTCAACAAAACCATCTCTCTCGCGCTAGAGAAGGAGACTGAAGTTTATAGTGAAGAGAATGCGAGATTCATTCATGGTCATGGTGTGGCGTACCGGCATATTTAAAGACGAACCGGTTTCAGTTTCAGTGTTATTACCAAACCCATGTCACAAAAACAAAAGGCCGGTTTCTTTTCTCCGCACAGAACCGGGTGTTGTCTTGAATCTTGATTACTTTGGTTCGGTTTTATTTTCTACATTGCTTTTTGTTTTCTTGTTCTTCCCTCAAGTTATTCCGGTTTAACAAGACTATATTGCTTACTAAGAAAGACCGATCTTCAATT - >AT5G19530.1
AAAATGCCAAAATATAAGCATGCGACGGAATTTTGGCAGAAGATTGTAGAGTTGTAATCTGTCGCAATCATTACTCATGCTAGCATTTTTCATTTTCCCTTCATTTGTGGATAACGCACGATATAACATTCTACACACCAACAAGATTCTATAAAAACGCAAAGCCGTAGAGGTCATGTTCGGAAATGGGTTCCCGGAGATTCACAAAGCCACATCACCCACTCAAACCCTCCACTCTAACCAGCAAGACTGCCATTGGTATGAAGAAACCATCGATGATGATCTCAAGTGGTCTTTTGCCCTCAACAGTGTTCTCCATCAAGGAACTAGTGAGTACCAAGATATTGCTCTGTTGGACACCAAACGTTTTGGAAAGGTGCTTGTGATTGATGGGAAAATGCAAAGTGCTGAGAGAGATGAGTTTATCTACCATGAATGTTTGATCCATCCCGCTCTCCTTTTCCATCCCAACCCCAAGACTGTGTTTATAATGGGAGGAGGTGAAGGCTCTGCTGCAAGAGAAATACTAAAACACACGACGATCGAGAAAGTTGTTATGTGTGATATTGATCAGGAAGTTGTTGATTTTTGCAGAAGATTTCTGACCGTTAACAGCGATGCTTTCTGTAACAAAAAGCTTGAACTTGTGATCAAAGATGCAAAGGCTGAATTAGAGAAAAGGGAAGAGAAGTTTGATATCATAGTGGGAGATTTAGCTGATCCAGTGGAAGGTGGACCTTGTTATCAGCTCTACACCAAATCCTTCTACCAAAACATTCTCAAACCCAAGCTTAGCCCTAATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGAATATTCACTCATAAGGAAGTCTTCACATCAATCTACAACACCATGAAGCAAGTCTTCAAGTACGTGAAGGCTTACACAGCACATGTGCCATCATTTGCGGACACATGGGGATGGGTGATGGCATCGGACCACGAGTTTGACGTTGAAGTTGATGAAATGGATCGAAGAATCGAAGAGAGAGTTAACGGAGAATTGATGTATCTAAACGCTCCTTCTTTCGTCTCTGCTGCTACTCTCAACAAAACCATCTCTCTCGCGCTAGAGAAGGAGACTGAAGTTTATAGTGAAGAGAATGCGAGATTCATTCATGGTCATGGTGTGGCGTACCGGCATATTTAAAGACGAACCGGTTTCAGTTTCAGTGTTATTACCAAACCCATGTCACAAAAACAAAAGGCCGGTTTCTTTTCTCCGCACAGAACCGGGTGTTGTCTTGAATCTTGATTACTTTGGTTCGGTTTTATTTTCTACATTGCTTTTTGTTTTCTTGTTCTTCCCTCAAGTTATTCCGGTTTAACAAGACTATATTGCTTACTAAGAAAGACCGATCTTCAATT
CDS Sequence
Protein Sequence