Information report for AT5G19520
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- GO:0006820 — involved in — monoatomic anion transport
- GO:0005886 — is active in — plasma membrane
- GO:0050982 — involved in — detection of mechanical stimulus
- GO:0008381 — enables — mechanosensitive monoatomic ion channel activity
- GO:0050982 — acts upstream of or within — detection of mechanical stimulus
- GO:0005634 — located in — nucleus
- GO:0005886 — located in — plasma membrane
- CS69760 — No visible phenotype
- CS73273 — dwarfed; leaves exhibit visible lesions of dead cells
- CS73274 — dwarfed; leaves exhibit visible lesions of dead cells
- CS73277 — dwarfed; leaves exhibit visible lesions of dead cells
- CS73278 — dwarfed; leaves exhibit visible lesions of dead cells
- SALK_114626 — Shifts single-channel amplitude peak from 10pa(WT) to 19.9pa.
- msl4-1; msl5-2; msl6-1; msl9-1; msl10-1 — Abolished stretch-activate mechanosensitive channel activity
- msl9-1; msl10-1 — Reduced stretch-activated mechanosensitive channel activity.
Literature and News
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: and shoot-specific genes. DOI: 10.1111/j.1365-313X.2004.02051.x ; PMID: 15078338
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- The JAZ family of repressors is the missing link in jasmonate signalling. DOI: 10.1038/nature06006 ; PMID: 17637675
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Two MscS homologs provide mechanosensitive channel activities in the Arabidopsis root. DOI: 10.1016/j.cub.2008.04.039 ; PMID: 18485707
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Genome-wide identification and evolutionary analysis of Arabidopsis sm genes family. DOI: 10.1080/07391102.2011.10508593 ; PMID: 21142222
- Mechanisms of cytosolic calcium elevation in plants: the role of ion channels, calcium extrusion systems and NADPH oxidase-mediated 'ROS-Ca(2+) Hub'. DOI: 10.1071/FP16420 ; PMID: 32291018
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: A0A654G2J2
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G2J2
- EnsemblPlants: AT5G19520.1, AT5G19520.2
- Gramene: AT5G19520.1, AT5G19520.2
- KEGG: ath:AT5G19520
- Orthologous matrix: WIFLFEE
- ExpressionAtlas: AT5G19520
- InterPro: IPR006685, IPR010920, IPR016688
- PANTHER: PTHR31618, PTHR31618:SF17
- SUPFAM: SSF50182
- Gene3D: 2.30.30.60
- SWISS-MODEL: A0A654G2J2
Sequences
cDNA Sequence
- >AT5G19520.2
TTCCCTTTCTCTGTTATCTTTATTTGTTTCTTTAAGTTTCTAAAAGTGTTTTCTTTTTTTTGTCCACCCAAAGATAAAGAGAGTTCAATACCTGCTCTGTTTTGTCTCTGTAACTTTTATAGTAAGCTTATATCCTAAGTATACGTTTGAATATTTTCCAACGAGGCACTGTTGGTTTACTTTTTCTTTGGAAGTATACATATGTGTTTTGGGAAACTGTTGATCCTTCTTACGGCTTTCTTCAGAAAATTGGATTTGGTCCAACTTCTAGGCTCTTTTGGGAGCCATTGGAGTCAAACAGCACCGCAAACTTATTGGTTGGAAGTGACTTAGGGATGGCTGAGAGGAGAGTCAGTAACGGAGAAGAAGTTGTTATTAATGTTTCAGATAAAGAAGATTCAAAAGATCCAAGAGCATCTCCTTCTTTCAATCCATTGGCTTCACCAGACTCCGATGCTGGGATTGAGAAATCGAAACCAGTGCCGCCCATAAGCATTCCTACTCCTGAAATCTATAAGTTCTCTGGTAGCGTTCATAAGCCACCTAAAATTCCAAGTCCTGAAGGTCTAGTTCGGAGGAAGTCTCTTTCGAGGTCAATTTACTCCAAGCCTAAGTCAAGGTTTGGGGAGCAACAGTCTTTTCGATACGATAGCACTAGAGAGGAAAATGGTGGAAGGTCCCTTAGGGAACAGTTTGGTGCTGGTTCATTTGCAAGGGGTTCTTTTGACAGGGCTTCTCCTAATAACAAATCCAATAGGAGCGTTGCGTCAGCAGCACTGAGTAAAGTTGCTGAGGAGGAACCGGATGAAAATGAAGAAATCTACAAAAAGGTTAAGCTACACCGAGTGAAGCGTAGCGGAATGAAACCTCTGGCCTTTCTTGAGTTGGTAGTGTTTATGGCCATTTTGGGGGCTTTAATTGTGAGTTTAACCATTGATGTGGTGAACAAGCATACCATTTGGGGGTTGGAATTTTGGAAATGGTGTGTGCTTGTGATGGTTACACTCAGCGGCATGTTGGTGACAAATTGGTTCATGCATTTTGTGGTGTTCATCATAGAAAAGAACTATCTTCTTCGGAAAAAAGTTTTGTACTTTGTGCATGGGTTGAAGAAGAATGTTCAAGTCTTCATTTGGTTTAGTCTGGTTCTGATTGCTTGGATATGTCTGTTCGATGGTGATGTTAAACGTACTCGTAAGACCAAGAGATTTCTAGACTTCATCACTTGGACTATTGTCTCTCTTCTCGTAGGGTCAATCCTTTTCTTGGTGAAGACGTTTGCCTTGAAAGTTCTTGCTTCAAAGTTCAACGTCAGAAACTTCTTTGAGAGGATTCAAGAGTCTGTTTTCCACCAATACGTTCTTCAGACTCTCTCGGGACCTCCGCTTATCGAAGAGGCAGAGAACGTTGGGCGCGTGCCAAGCACAGGTCACCTAAGTTTCACAAGAACCAAAGATGGAAAGGTGAAAGACAAGAAAGTGATCGATATGGGAAAGGTTCACAGGATGAAACAAGAGAAGGTCTCTGCTTGGACAATGCGTGTTTTGATCGAAGCCGTGGGAACTTCAGGTATATCAACCATATCCAGCACTCTAGACGAGGTCAACAATAAGAAAGAGAGAACAGATAAAGAGATAACAAATGAGATGGAGGCTGTTGCTGCTGCTTATGACGTCTTCAACAATGTCGCTAAGCCAAACCACAATTACATAGAAGAAGATGACTTATTGAGGTTCATGATAAAGGAAGAAGTAGACCTTGTACTCCCATTAATAGAAGATGCCGACACCGGAAAAATCACACGCAAGACTTTTACAGAATGGGTGGTTAATGTATACACAAGTCGGAAAACTATAGGGCATTCACTGAACGACACAAAAACAGCGGTTAAGCAGTTGGACAAACTTATAACTGGAATCTTGACCGTTATCACATTCATTGTTTGGATGGTACTTCTGGATATAGCATCGACCAAGCTTTTATTGGTCTTCTCCTCACAATTTTTGGGTCTTGCTTTCATGATCGGAAGTACTTGTAAGAATATCTTCGAATCCTTTATGTTCGTCTTTGTGATGCATCCTTATGACGTCGGAGATCGTTGCGTTGTCGACGGTGTTATGTTGTTGGTTGAAGAAATAGATCTTTTAACAACCGTGTTCCTCAAGATTGACAACGAGAAAGTGTTCTACCCAAATTCGGTTTTAATATCGAAACCGATAAGCAACTTCTACAGAAGTCCAGATATGGGAGATTATGTCGACTTCGGCATCGCATTCTCAACACCGGCCGAGAAAATCGGCTGTCTCAAGGGAAAAATCGGAGAATACTTGGTGGCAAACTCACAACATTGGTATCCAGAAGCACAGGTGATGGTGAGGGCAATTGAGAATATGAACAAGCTGGTATTGAATATACTGGTCCAACACACGATAAATTTCCAAGTATATGTAGAGAAGAGTTTAAGAAGAACCGCGCTGATCATCGCAATCAAGCGAATTCTCGAGGATCTTGAGATCGATTACACTCTCCTTCCTCAAGATGTCAATCTCACTGGTCACAAATGATCGTGTTTTCCTTCTCTTCTTTTGCATTTTATTCCACTAGTACTAGTTTCCTTCATTTGCTTCGGTTTAAATTTGATTTGTTTCGGTTTAATTGCACTCAGAAACTCGGGTTTACTTTAATTGCTTCGGTTTAATCGAACCATAATTGGCCTATTCGATTTCTAG - >AT5G19520.1
TTCCCTTTCTCTGTTATCTTTATTTGTTTCTTTAAGTTTCTAAAAGTGTTTTCTTTTTTTTGTCCACCCAAAGATAAAGAGAGTTCAATACCTGCTCTGTTTTGTCTCTGTAACTTTTATAGTAAGCTTATATCCTAAGTATACGTTTGAATATTTTCCAACGAGGCACTGTTGGTTTACTTTTTCTTTGGAAGTATACATATGTGTTTTGGGAAACTGTTGATCCTTCTTACGGCTTTCTTCAGAAAATTGGATTTGGTCCAACTTCTAGGCTCTTTTGGGAGCCATTGGAGTCAAACAGCACCGCAAACTTATTGGTTGGAAGTGACTTAGGGATGGCTGAGAGGAGAGTCAGTAACGGAGAAGAAGTTGTTATTAATGTTTCAGATAAAGAAGATTCAAAAGATCCAAGAGCATCTCCTTCTTTCAATCCATTGGCTTCACCAGACTCCGATGCTGGGATTGAGAAATCGAAACCAGTGCCGCCCATAAGCATTCCTACTCCTGAAATCTATAAGTTCTCTGGTAGCGTTCATAAGCCACCTAAAATTCCAAGTCCTGAAGGTCTAGTTCGGAGGAAGTCTCTTTCGAGGTCAATTTACTCCAAGCCTAAGTCAAGGTTTGGGGAGCAACAGTCTTTTCGATACGATAGCACTAGAGAGGAAAATGGTGGAAGGTCCCTTAGGGAACAGTTTGGTGCTGGTTCATTTGCAAGGGGTTCTTTTGACAGGGCTTCTCCTAATAACAAATCCAATAGGAGCGTTGCGTCAGCAGCACTGAGTAAAGTTGCTGAGGAGGAACCGGATGAAAATGAAGAAATCTACAAAAAGGTTAAGCTACACCGAGTGAAGCGTAGCGGAATGAAACCTCTGGCCTTTCTTGAGTTGGTAGTGTTTATGGCCATTTTGGGGGCTTTAATTGTGAGTTTAACCATTGATGTGGTGAACAAGCATACCATTTGGGGGTTGGAATTTTGGAAATGGTGTGTGCTTGTGATGGTTACACTCAGCGGCATGTTGGTGACAAATTGGTTCATGCATTTTGTGGTGTTCATCATAGAAAAGAACTATCTTCTTCGGAAAAAAGTTTTGTACTTTGTGCATGGGTTGAAGAAGAATGTTCAAGTCTTCATTTGGTTTAGTCTGGTTCTGATTGCTTGGATATGTCTGTTCGATGGTGATGTTAAACGTACTCGTAAGACCAAGAGATTTCTAGACTTCATCACTTGGACTATTGTCTCTCTTCTCGTAGGGTCAATCCTTTTCTTGGTGAAGACGTTTGCCTTGAAAGTTCTTGCTTCAAAGTTCAACGTCAGAAACTTCTTTGAGAGGATTCAAGAGTCTGTTTTCCACCAATACGTTCTTCAGACTCTCTCGGGACCTCCGCTTATCGAAGAGGCAGAGAACGTTGGGCGCGTGCCAAGCACAGGTCACCTAAGTTTCACAAGAACCAAAGATGGAAAGGTGAAAGACAAGAAAGTGATCGATATGGGAAAGGTTCACAGGATGAAACAAGAGAAGGTCTCTGCTTGGACAATGCGTGTTTTGATCGAAGCCGTGGGAACTTCAGGTATATCAACCATATCCAGCACTCTAGACGAGGTCAACAATAAGAAAGAGAGAACAGATAAAGAGATAACAAATGAGATGGAGGCTGTTGCTGCTGCTTATGACGTCTTCAACAATGTCGCTAAGCCAAACCACAATTACATAGAAGAAGATGACTTATTGAGGTTCATGATAAAGGAAGAAGTAGACCTTGTACTCCCATTAATAGAAGATGCCGACACCGGAAAAATCACACGCAAGACTTTTACAGAATGGGTGGTTAATGTATACACAAGTCGGAAAACTATAGGGCATTCACTGAACGACACAAAAACAGCGGTTAAGCAGTTGGACAAACTTATAACTGGAATCTTGACCGTTATCACATTCATTGTTTGGATGGTACTTCTGGATATAGCATCGACCAAGCTTTTATTGGTCTTCTCCTCACAATTTTTGGGTCTTGCTTTCATGATCGGAAGTACTTGTAAGAATATCTTCGAATCCTTTATGTTCGTCTTTGTGATGCATCCTTATGACGTCGGAGATCGTTGCGTTGTCGACGGTGTTATGTTGTTGGTTGAAGAAATAGATCTTTTAACAACCGTGTTCCTCAAGATTGACAACGAGAAAGTGTTCTACCCAAATTCGGTTTTAATATCGAAACCGATAAGCAACTTCTACAGAAGTCCAGATATGGGAGATTATGTCGACTTCGGCATCGCATTCTCAACACCGGCCGAGAAAATCGGCTGTCTCAAGGGAAAAATCGGAGAATACTTGGTGGCAAACTCACAACATTGGTATCCAGAAGCACAGGTGATGGTGAGGGCAATTGAGAATATGAACAAGCTGGTATTGAATATACTGGTCCAACACACGATAAATTTCCAAGTATATGTAGAGAAGAGTTTAAGAAGAACCGCGCTGATCATCGCAATCAAGCGAATTCTCGAGGATCTTGAGATCGATTACACTCTCCTTCCTCAAGATGTCAATCTCACTGGTCACAAATGATCGTGTTTTCCTTCTCTTCTTTTGCATTTTATTCCACTAGTACTAGTTTCCTTCATTTGCTTCGGTTTAAATTTGATTTGTTTCGGTTTAATTGCACTCAGAAACTCGGGTTTACTTTAATTGCTTCGGTTTAATCGAACCATAATTGGCCTATTCGATTTCTAG
CDS Sequence
Protein Sequence