Gene Details:
- Gene ID: AT5G19430
- Gene Symbol: C3HC4
- Gene Name:
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2150310
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0051252 — acts upstream of or within — regulation of RNA metabolic process
- GO:0050793 — acts upstream of or within — regulation of developmental process
- GO:0003674 — enables — molecular_function
- GO:0009416 — acts upstream of or within — response to light stimulus
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite. DOI: 10.1093/jxb/erv025 ; PMID: 25697796
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT5G19430.2
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC - >AT5G19430.4
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC - >AT5G19430.6
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC - >AT5G19430.1
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC - >AT5G19430.3
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC - >AT5G19430.5
CTGTAACATGTCGTTTTGAGTGTACTGATCTGTCGCAATTCTATAGGACAGGTTAGAACTTCTGGTGGAGGAAGAAGGTTCGGGTTCTGTTTTGTCTCTTGTGTGCTTTGTTGTTAGTTCTTGAGGTATCGGGAATCATTCTCTTAGCATATCTCCTTTTCTCGTCTCGGTGGTTCGCTGTCCCACAGCCACTCTCTCTAATCCGGGCTCCTTAATCTTGACGAACAGATTTCAGAAGAACATCTTCTTTCTTCAACTACCAAATCTTTCGTTTTTTCTATCTAATTTCGCCGCCATGAGTTCCGTTACCGAGATCGTGTCTGAGCAGCAAGTGATCGACGGTATTCAGGATTTGGCCCTTCAAAATCAGGTTCTTTGTTACCCTTATTCAATTCATATTCTCGTCTCTTGATGAAAATTTTCAAATTTTAAATATGTTTGCTTTGTGTGTCGGTCTTGTTTCGGAGTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTATCTAGCCTTGCTCCACAATATTAGGGACAAAAAGAAGATCCAGGAAGAGATCCATGAGCCGAGTTTCGGGAATCATGGTGGCTGTTGTGCAATATGTTTGAGTGAAATTCCTCTTCAAGAAACTGCTATGGTCAAAGGCTGTGAACACACTTACTGTGTGACATGCATACTTCGTTGGGCGAGTTGCAAAGAGAGTCCCACATGCCCACAATGTAAGCATCCATTTGATTTTCTCAGTGTCCACCGAGCACTTGATGGCAGCATTGAAGATTTTCTGTTTGAGGAGAGTGTGTGCCTTCTCCTTAGAGCCTCATGGTTTGTACCATTGGATGTGGTGGAACAGGCGTCGTACAGCCATGGTTACCATGATGATTTTGACATTCCTTATGACTACGAGGATGAAGATGATGACCTTGACGAGTTTTATCTGCACGGCTCAAGTCTTCGCATAGGAAATCGGAGATGGGGTGGCAATGGTTTTGTCAGATCCGGGCGTCAAGAAGCCAGGCCTGTCCAGAGATACAGTGGTTCTGGTTCTAGTTCCAGTTCCAGCTCTGGGTCATCCTCAAGTGAGCCTAAGGATAAGCAGGTGAAGACGACAAACACAACAGGAAGACGTGCAAAAAGGGCAATGAAGCGTGAAGCTGCAAACAAAGCAGCGGAAGTAACTGCAGCAGCAAAGCACGAGGCCCATTTGGTTAGGTTGGGAAGGAAGTGAGTGTGTATCTGTAAATAAATTGCACTCAAAAAGCTTCCACCTACTTCCATTACTTAGTATCATCTGTACAGCAAGTAGTTTTTAATGTTGTGATTAATCCCTGTCAGACCACTATATAATGGTGTGGGGTTTGGAATGGTAGAAACAAGAAGTTGTGACTCATTGTCTCATACAATACTTGGACAACCATTGGCTATCATATTACTCTGTTCATTAAATCTTGTTATGTTTC
CDS Sequence
Protein Sequence