Information report for AT5G19180
Gene Details
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Functional Descriptions
- PO:0000229 — flower meristem — floral meristem (exact), mersitema floral (Spanish, exact), 花芽分裂組織 (Japanese, exact), floral apical meristem (related), Poaceae floret meristem (narrow), ear floret meristem (narrow), floret meristem (narrow), tassel floret meristem (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0020144 — apical meristem — AM (exact), meristema apical (Spanish, exact), 頂端分裂組織 (Japanese, exact), primary meristem (related), promeristem (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0019781 — enables — NEDD8 activating enzyme activity
- GO:0008641 — enables — ubiquitin-like modifier activating enzyme activity
Functional Keywords
Literature and News
- The Arabidopsis cullin AtCUL1 is modified by the ubiquitin-related protein RUB1. DOI: 10.1073/pnas.96.26.15342 ; PMID: 10611386
- The ubiquitin-related protein RUB1 and auxin response in Arabidopsis. DOI: 10.1126/science.280.5370.1760 ; PMID: 9624055
- AXR1-ECR1-dependent conjugation of RUB1 to the Arabidopsis Cullin AtCUL1 is required for auxin response. DOI: 10.1105/tpc.010282 ; PMID: 11884684
- Role of the Arabidopsis RING-H2 protein RBX1 in RUB modification and SCF function. DOI: 10.1105/tpc.003178 ; PMID: 12215511
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- AXR1-ECR1 and AXL1-ECR1 heterodimeric RUB-activating enzymes diverge in function in Arabidopsis thaliana. DOI: 10.1007/s11103-011-9750-8 ; PMID: 21311953
- The ubiquitin-related protein RUB1 and auxin response in Arabidopsis. DOI: 10.1126/science.280.5370.1760 ; PMID: 9624055
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A1P8BGN7
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BGN7
- EnsemblPlants: AT5G19180.2
- Gramene: AT5G19180.2
- ExpressionAtlas: AT5G19180
- InterPro: IPR000594, IPR023318, IPR030468
- PANTHER: PTHR10953, PTHR10953:SF6
- SUPFAM: SSF69572
- PROSITE: PS00865
- Gene3D: 1.10.10.520, 3.40.50.720
- SWISS-MODEL: A0A1P8BGN7
- Conserved Domain Database: cd01488
Sequences
cDNA Sequence
- >AT5G19180.2
AGGGTCGGCTCAAAGAGAGAAGCCAATACAAGTTTCGGAGCTCTGTGGCAGTGTATCGGCTTTGCGTCTTTTGAGCTCTCTCCGCCGTGATCAATCTCCGTGAATCGCCGCCACTCTCTCGGTTTCAATGGCTGATCTCGATGTTCCTCCTCAAGTTCCTCAAAGTAAAACTAGAGACCTTGACAAGCTTCTTCTCCGTCATGGGAATCTCGTTGACCCCGGCTTCGTACCCGGACCCGGCCTGAGGGATGACATAAGGGATTATGTGAGAATCTTGGTGATTGGTGCGGGTGGGTTGGGTTGTGAGCTTCTCAAGGATTTAGCTCTTTCTGGTTTTCGTAATCTCGAAGTGATTGATATGGACCGTATTGAGGTTACTAATCTCAATCGCCAGTTCCTGTTCAGGATTGAAGATGTAGGAAAGCCTAAGGCAGAGGTAGCAGCAAAGCGTGTAATGGAGAGAGTGAGTGGAGTAGAGATTGTGCCGCATTTTTCACGTATAGAAGACAAAGAGATTGAGTTTTATAACGATTTTAATATCATTGCTCTTGGTCTTGATTCTATCGAAGCTCGCAAATACATCAATGGGGTAGCTTGTGGGTTTCTTGAGTATAATGAAGATGATACTCCGAAAAGAGAAACGATCAAGCCAATGGTAGATGGGGGAACTGAAGGTTTCAAGGGTCATGCTAGAGTTATCTTGCCTGGAGTTACACCCTGTTTTGAGTGCACTATTTATCTTTTCCCACCTCAAGTGAAGTTTCCGTTGTGCACTCTTGCAGAAACCCCTAGGAATGCAGCTCATTGCATTGAATATGCTCATCTTATTCAGTGGGAAACGGTTCATCGTGGGAAAACCTTTGATCCTGATGAACCAGAACATATGAAGTGGGTTTATGATGAGGCTATCAGGAGAGCTGAGCTTTTTGGAATTCCAGGTGTCACATACTCTCTCACACAAGGTGTGGTTAAAAACATAATACCGGCGATTGCTTCCACCAATGCGATAATATCTGCAGCTTGTGCACTTGAAACCTTGAAGATTGTGTCTGCATGCAGCAAAACACTTGTAAATTATTTGACGTATAACGGTGGAGAGGGTCTTTACACTGAAGTGACAAAGTTCGAGAGGGACACCGAATGTCTTGTATGTGGTCCGGGCATTCTGATTGAGCTGGACACCTCAGTCACTTTATCAAAGGTCCTTCCTCTCGCATTATCATCTCATTGTCTTTTTTATACCACGATTATCTTGATTTTCATACTCACGTATTGCTTCATTCATGCTAAATTATCTTCTCTATTACTATCTCCTCGCTTTTCCAGGCTTGGTTTTAGCTAAATCTCAATTTACTCGTGCTTTGTTTGTCCATGTAAATCTGCGTCTCAATTCTTTACCATTTATTTGTTCATGTTTTGTTTTTCTTTGTCCTAGTTCATTGAGATGCTTGAAGATCACCCGAAGCTTCTATTGTCAAAAGCAAGTGTTAAACAGGGGGAAAACACTCTCTACATGCAGGCACCTCCGGTTCTAGAAGAGTTTCACAGACCAAAGCTAAGCAAGCCGCTTTATGACCTCATGGGAAGAGTCCAGAAGGACACTATCCACGTGTTTGGACAAAGAGCCCTCAAGAACAATGAGAAAGAGTCGTGCACAACGAAGGTAAGAGTTGTATTCAAAGGAGCCGATGGTGTTGCAGACATGGATACAGCCATTGGAGCATGAAAACCGACAGAGAAACCCTTTGATTGCAGCTTTTAGATCCATTGAGATAATTGGGCAGCTTGACTAGTCCAGTTCTTATTTTTTGTACCTTTTTTGTTTGTATGTCGTTTAATAGCTGTGACTGCAGAATTTTACTGCTTGGGGAACAAAAAATGACTCCAAACAGTGAGTTTATATGATTATTCTTAATCTCGGATTGTTCTTAATCTCAAAGATGTGTCTTGAGATTGTTTTCTTAACAGTTCATATGATCAGGATTCTACCTGCGATTTCAGATACAAGC - >AT5G19180.1
AGGGTCGGCTCAAAGAGAGAAGCCAATACAAGTTTCGGAGCTCTGTGGCAGTGTATCGGCTTTGCGTCTTTTGAGCTCTCTCCGCCGTGATCAATCTCCGTGAATCGCCGCCACTCTCTCGGTTTCAATGGCTGATCTCGATGTTCCTCCTCAAGTTCCTCAAAGTAAAACTAGAGACCTTGACAAGCTTCTTCTCCGTCATGGGAATCTCGTTGACCCCGGCTTCGTACCCGGACCCGGCCTGAGGGATGACATAAGGGATTATGTGAGAATCTTGGTGATTGGTGCGGGTGGGTTGGGTTGTGAGCTTCTCAAGGATTTAGCTCTTTCTGGTTTTCGTAATCTCGAAGTGATTGATATGGACCGTATTGAGGTTACTAATCTCAATCGCCAGTTCCTGTTCAGGATTGAAGATGTAGGAAAGCCTAAGGCAGAGGTAGCAGCAAAGCGTGTAATGGAGAGAGTGAGTGGAGTAGAGATTGTGCCGCATTTTTCACGTATAGAAGACAAAGAGATTGAGTTTTATAACGATTTTAATATCATTGCTCTTGGTCTTGATTCTATCGAAGCTCGCAAATACATCAATGGGGTAGCTTGTGGGTTTCTTGAGTATAATGAAGATGATACTCCGAAAAGAGAAACGATCAAGCCAATGGTAGATGGGGGAACTGAAGGTTTCAAGGGTCATGCTAGAGTTATCTTGCCTGGAGTTACACCCTGTTTTGAGTGCACTATTTATCTTTTCCCACCTCAAGTGAAGTTTCCGTTGTGCACTCTTGCAGAAACCCCTAGGAATGCAGCTCATTGCATTGAATATGCTCATCTTATTCAGTGGGAAACGGTTCATCGTGGGAAAACCTTTGATCCTGATGAACCAGAACATATGAAGTGGGTTTATGATGAGGCTATCAGGAGAGCTGAGCTTTTTGGAATTCCAGGTGTCACATACTCTCTCACACAAGGTGTGGTTAAAAACATAATACCGGCGATTGCTTCCACCAATGCGATAATATCTGCAGCTTGTGCACTTGAAACCTTGAAGATTGTGTCTGCATGCAGCAAAACACTTGTAAATTATTTGACGTATAACGGTGGAGAGGGTCTTTACACTGAAGTGACAAAGTTCGAGAGGGACACCGAATGTCTTGTATGTGGTCCGGGCATTCTGATTGAGCTGGACACCTCAGTCACTTTATCAAAGGTCCTTCCTCTCGCATTATCATCTCATTGTCTTTTTTATACCACGATTATCTTGATTTTCATACTCACGTATTGCTTCATTCATGCTAAATTATCTTCTCTATTACTATCTCCTCGCTTTTCCAGGCTTGGTTTTAGCTAAATCTCAATTTACTCGTGCTTTGTTTGTCCATGTAAATCTGCGTCTCAATTCTTTACCATTTATTTGTTCATGTTTTGTTTTTCTTTGTCCTAGTTCATTGAGATGCTTGAAGATCACCCGAAGCTTCTATTGTCAAAAGCAAGTGTTAAACAGGGGGAAAACACTCTCTACATGCAGGCACCTCCGGTTCTAGAAGAGTTTCACAGACCAAAGCTAAGCAAGCCGCTTTATGACCTCATGGGAAGAGTCCAGAAGGACACTATCCACGTGTTTGGACAAAGAGCCCTCAAGAACAATGAGAAAGAGTCGTGCACAACGAAGGTAAGAGTTGTATTCAAAGGAGCCGATGGTGTTGCAGACATGGATACAGCCATTGGAGCATGAAAACCGACAGAGAAACCCTTTGATTGCAGCTTTTAGATCCATTGAGATAATTGGGCAGCTTGACTAGTCCAGTTCTTATTTTTTGTACCTTTTTTGTTTGTATGTCGTTTAATAGCTGTGACTGCAGAATTTTACTGCTTGGGGAACAAAAAATGACTCCAAACAGTGAGTTTATATGATTATTCTTAATCTCGGATTGTTCTTAATCTCAAAGATGTGTCTTGAGATTGTTTTCTTAACAGTTCATATGATCAGGATTCTACCTGCGATTTCAGATACAAGC
CDS Sequence
Protein Sequence