Information report for AT5G19000
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Functional Keywords
- root , shoot system , vascular leaf , flower
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Arabidopsis AtCUL3a and AtCUL3b form complexes with members of the BTB/POZ-MATH protein family. DOI: 10.1104/pp.104.052654 ; PMID: 15618422
- Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo. DOI: 10.1105/tpc.105.031989 ; PMID: 15772280
- Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis. DOI: 10.1074/jbc.M413247200 ; PMID: 15749712
- Arabidopsis thaliana BTB/ POZ-MATH proteins interact with members of the ERF/AP2 transcription factor family. DOI: 10.1111/j.1742-4658.2009.07373.x ; PMID: 19843165
- MATH/BTB CRL3 receptors target the homeodomain-leucine zipper ATHB6 to modulate abscisic acid signaling. DOI: 10.1016/j.devcel.2011.10.018 ; PMID: 22172674
- Arabidopsis BPM proteins function as substrate adaptors to a cullin3-based E3 ligase to affect fatty acid metabolism in plants. DOI: 10.1105/tpc.112.107292 ; PMID: 23792371
- BPM1 regulates RdDM-mediated DNA methylation via a cullin 3 independent mechanism. DOI: 10.1007/s00299-022-02911-9 ; PMID: 36066603
- Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis. DOI: 10.1074/jbc.M413247200 ; PMID: 15749712
Gene Resources
- UniProt: A0A178UHC2
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UHC2
- EnsemblPlants: AT5G19000.1, AT5G19000.3
- Gramene: AT5G19000.1, AT5G19000.3
- KEGG: ath:AT5G19000
- ExpressionAtlas: AT5G19000
- InterPro: IPR000210, IPR002083, IPR008974
- PANTHER: PTHR26379, PTHR26379:SF348
- SUPFAM: SSF49599, SSF54695
- PROSITE: PS50097, PS50144
- Gene3D: 1.25.40.420, 2.60.210.10, 3.30.710.10
- OrthoDB: A0A178UHC2
- SWISS-MODEL: A0A178UHC2
- Conserved Domain Database: cd00121, cd14736, cd18280
Sequences
cDNA Sequence
- >AT5G19000.3
ATGATCGCTTTCGTTATATTCATTCTCTCTTTTCTCTTTCCATTTTGGCTCCCACCGACGTCATCAATCTCTACCGGAGACTTCCGCCGATTCTCACACCGTTCTTCTTCTCTCCTTCCGATTCCGGATTCCAATTTCGTTCCTTTTTTGTTTTCTCTCAAAACCCCTAAATTTTCTTCCTTTCTTCGATCTGGATTTTTTGTGTTCCCCAAATTTCAAGACTTTGATCTGATTCCTTCTAAGATTTCTCCAAAGCAAAGATCTTTTTTTTGTTTTTTGGGATCTCTGTATTGTTGATGGGCACAACTAGGGTCTGCTCGGAGGTTTCTTCTGGATCTTCGAAATCGCTTAGCCAATCTCTCACGGTATCGACCTCTACCACAGAAACAGTCAATGGTTTCCATGAATTCAAGATCTGTGGGTACTCTCTCGCTAAAGGTGTTGGTGTCGGCAAATACGTCGCTTCCGATACGTTTATGGTCGGTGGTTACTCGTGGGCAATCTACTTTTATCCAGATGGGAAGAGTCCGGAGGATAACTCGTCTTACGTTTCTTTGTTCATAGCTCTTGCTAGCGAAGGAGCTGATGTTAGGGCTTTGTTTGAGCTCACGCTTGTGGATCAGAGTGGTAATGGGAAGCATAAGGTTCATAGCCATTTTGGTAGAGCTCTCGATAGCGGTCCCTATACTCTCAAGTATCGTGGAAGCATGTGGGGATACAAGCGGTTTTTCAGGAGGTCCAGTCTAGAATCGTCGGATTATTTGAAGGAGAATAGTCTCTTGGTTAGGTGCCGTGTGGGTGTGGTGAAGTCAGTTACGGAGGGACCGAGGTATTACAATATCCCTGTGCCAGTTTCTAACTTGGGACAACAGTTGGGAAATTTATTGGAGAGTGGGAAAGGCTGTGATGTTGTTTTCCAAGTTGATGGAGAAACCTTCAACGCACACAAATTGGTTCTTGCAACGCGTTCCCCGGTTTTCAACGCACAGCTTTTTGGCCCTTTAGGAGACCGAAATACCAAATGCATAACGATAGAAGACATGGAAGCACCCATTTTCAAGGTATTGCTCCATTTTATCTACTGGGACGAATTGCCTGATATGCAAGAGTTAATAGGAACAGACTCTACATTGGCGTCTACTCTTGTGGCTCAGCATCTACTAGCAGCGGCAGACCGTTATGCTCTTGAGCGGCTTAAAGCAATCTGTGAGTCAAAACTCTGTGAAGGGGTTGCCATAAACACGGTTGCAACTACTTTGGCCCTAGCAGAGCAGCATCATTGTTTGCAGCTAAAAGCAGTGTGTCTCAAATTCGTGGCACTGCCAGAGAACCTGAAAGCTGTGATGCAAACAGATGGGTTTGATTATCTGAAAGAGAGTTGCCCATCTTTACTAACGGAGCTATTGCAGTATGTGGCGAGGCTAAGTGAACACTCTGTTATAGTATCTGGACATCGAAAAGAAATATTTGCCGATGGTTGTGACGCGAGTGGAAGACGAGTGAAGCCCCGGTTGCACTGAATGGGAGAGAAAGAAGAAAGATTTGTGCATTGTATAATCTCTGTTATGGATAATGGCTGATCTAATCGGATCTAGCAAGTACAATGAATCGTTTTCAACGCGTTTTCTCATAAATCAAAGATCCAATGAAATTTGGGGTTTATTGTTGGTGCATATCAGATTATTAGGTGAAACAGATTGAGTTCATGGGATATAAGAATCGTAGACAGTCATGTCTTCACGT - >AT5G19000.2
ATGATCGCTTTCGTTATATTCATTCTCTCTTTTCTCTTTCCATTTTGGCTCCCACCGACGTCATCAATCTCTACCGGAGACTTCCGCCGATTCTCACACCGTTCTTCTTCTCTCCTTCCGATTCCGGATTCCAATTTCGTTCCTTTTTTGTTTTCTCTCAAAACCCCTAAATTTTCTTCCTTTCTTCGATCTGGATTTTTTGTGTTCCCCAAATTTCAAGACTTTGATCTGATTCCTTCTAAGATTTCTCCAAAGCAAAGATCTTTTTTTTGTTTTTTGGGATCTCTGTATTGTTGATGGGCACAACTAGGGTCTGCTCGGAGGTTTCTTCTGGATCTTCGAAATCGCTTAGCCAATCTCTCACGGTATCGACCTCTACCACAGAAACAGTCAATGGTTTCCATGAATTCAAGATCTGTGGGTACTCTCTCGCTAAAGGTGTTGGTGTCGGCAAATACGTCGCTTCCGATACGTTTATGGTCGGTGGTTACTCGTGGGCAATCTACTTTTATCCAGATGGGAAGAGTCCGGAGGATAACTCGTCTTACGTTTCTTTGTTCATAGCTCTTGCTAGCGAAGGAGCTGATGTTAGGGCTTTGTTTGAGCTCACGCTTGTGGATCAGAGTGGTAATGGGAAGCATAAGGTTCATAGCCATTTTGGTAGAGCTCTCGATAGCGGTCCCTATACTCTCAAGTATCGTGGAAGCATGTGGGGATACAAGCGGTTTTTCAGGAGGTCCAGTCTAGAATCGTCGGATTATTTGAAGGAGAATAGTCTCTTGGTTAGGTGCCGTGTGGGTGTGGTGAAGTCAGTTACGGAGGGACCGAGGTATTACAATATCCCTGTGCCAGTTTCTAACTTGGGACAACAGTTGGGAAATTTATTGGAGAGTGGGAAAGGCTGTGATGTTGTTTTCCAAGTTGATGGAGAAACCTTCAACGCACACAAATTGGTTCTTGCAACGCGTTCCCCGGTTTTCAACGCACAGCTTTTTGGCCCTTTAGGAGACCGAAATACCAAATGCATAACGATAGAAGACATGGAAGCACCCATTTTCAAGGTATTGCTCCATTTTATCTACTGGGACGAATTGCCTGATATGCAAGAGTTAATAGGAACAGACTCTACATTGGCGTCTACTCTTGTGGCTCAGCATCTACTAGCAGCGGCAGACCGTTATGCTCTTGAGCGGCTTAAAGCAATCTGTGAGTCAAAACTCTGTGAAGGGGTTGCCATAAACACGGTTGCAACTACTTTGGCCCTAGCAGAGCAGCATCATTGTTTGCAGCTAAAAGCAGTGTGTCTCAAATTCGTGGCACTGCCAGAGAACCTGAAAGCTGTGATGCAAACAGATGGGTTTGATTATCTGAAAGAGAGTTGCCCATCTTTACTAACGGAGCTATTGCAGTATGTGGCGAGGCTAAGTGAACACTCTGTTATAGTATCTGGACATCGAAAAGAAATATTTGCCGATGGTTGTGACGCGAGTGGAAGACGAGTGAAGCCCCGGTTGCACTGAATGGGAGAGAAAGAAGAAAGATTTGTGCATTGTATAATCTCTGTTATGGATAATGGCTGATCTAATCGGATCTAGCAAGTACAATGAATCGTTTTCAACGCGTTTTCTCATAAATCAAAGATCCAATGAAATTTGGGGTTTATTGTTGGTGCATATCAGATTATTAGGTGAAACAGATTGAGTTCATGGGATATAAGAATCGTAGACAGTCATGTCTTCACGT - >AT5G19000.1
ATGATCGCTTTCGTTATATTCATTCTCTCTTTTCTCTTTCCATTTTGGCTCCCACCGACGTCATCAATCTCTACCGGAGACTTCCGCCGATTCTCACACCGTTCTTCTTCTCTCCTTCCGATTCCGGATTCCAATTTCGTTCCTTTTTTGTTTTCTCTCAAAACCCCTAAATTTTCTTCCTTTCTTCGATCTGGATTTTTTGTGTTCCCCAAATTTCAAGACTTTGATCTGATTCCTTCTAAGATTTCTCCAAAGCAAAGATCTTTTTTTTGTTTTTTGGGATCTCTGTATTGTTGATGGGCACAACTAGGGTCTGCTCGGAGGTTTCTTCTGGATCTTCGAAATCGCTTAGCCAATCTCTCACGGTATCGACCTCTACCACAGAAACAGTCAATGGTTTCCATGAATTCAAGATCTGTGGGTACTCTCTCGCTAAAGGTGTTGGTGTCGGCAAATACGTCGCTTCCGATACGTTTATGGTCGGTGGTTACTCGTGGGCAATCTACTTTTATCCAGATGGGAAGAGTCCGGAGGATAACTCGTCTTACGTTTCTTTGTTCATAGCTCTTGCTAGCGAAGGAGCTGATGTTAGGGCTTTGTTTGAGCTCACGCTTGTGGATCAGAGTGGTAATGGGAAGCATAAGGTTCATAGCCATTTTGGTAGAGCTCTCGATAGCGGTCCCTATACTCTCAAGTATCGTGGAAGCATGTGGGGATACAAGCGGTTTTTCAGGAGGTCCAGTCTAGAATCGTCGGATTATTTGAAGGAGAATAGTCTCTTGGTTAGGTGCCGTGTGGGTGTGGTGAAGTCAGTTACGGAGGGACCGAGGTATTACAATATCCCTGTGCCAGTTTCTAACTTGGGACAACAGTTGGGAAATTTATTGGAGAGTGGGAAAGGCTGTGATGTTGTTTTCCAAGTTGATGGAGAAACCTTCAACGCACACAAATTGGTTCTTGCAACGCGTTCCCCGGTTTTCAACGCACAGCTTTTTGGCCCTTTAGGAGACCGAAATACCAAATGCATAACGATAGAAGACATGGAAGCACCCATTTTCAAGGTATTGCTCCATTTTATCTACTGGGACGAATTGCCTGATATGCAAGAGTTAATAGGAACAGACTCTACATTGGCGTCTACTCTTGTGGCTCAGCATCTACTAGCAGCGGCAGACCGTTATGCTCTTGAGCGGCTTAAAGCAATCTGTGAGTCAAAACTCTGTGAAGGGGTTGCCATAAACACGGTTGCAACTACTTTGGCCCTAGCAGAGCAGCATCATTGTTTGCAGCTAAAAGCAGTGTGTCTCAAATTCGTGGCACTGCCAGAGAACCTGAAAGCTGTGATGCAAACAGATGGGTTTGATTATCTGAAAGAGAGTTGCCCATCTTTACTAACGGAGCTATTGCAGTATGTGGCGAGGCTAAGTGAACACTCTGTTATAGTATCTGGACATCGAAAAGAAATATTTGCCGATGGTTGTGACGCGAGTGGAAGACGAGTGAAGCCCCGGTTGCACTGAATGGGAGAGAAAGAAGAAAGATTTGTGCATTGTATAATCTCTGTTATGGATAATGGCTGATCTAATCGGATCTAGCAAGTACAATGAATCGTTTTCAACGCGTTTTCTCATAAATCAAAGATCCAATGAAATTTGGGGTTTATTGTTGGTGCATATCAGATTATTAGGTGAAACAGATTGAGTTCATGGGATATAAGAATCGTAGACAGTCATGTCTTCACGT
CDS Sequence
Protein Sequence