Information report for AT5G18810
Gene Details
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Functional Descriptions
- GO:0016607 — is active in — nuclear speck
- GO:0005634 — located in — nucleus
- GO:0000398 — acts upstream of or within — mRNA splicing, via spliceosome
- GO:0016607 — located in — nuclear speck
- GO:0000398 — involved in — mRNA splicing, via spliceosome
- GO:0005515 — enables — protein binding
- GO:0003723 — enables — RNA binding
Functional Keywords
Literature and News
- Network of interactions of a novel plant-specific Arg/Ser-rich protein, atRSZ33, with atSC35-like splicing factors. DOI: 10.1074/jbc.M206455200 ; PMID: 12176998
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Use of fluorescent protein tags to study nuclear organization of the spliceosomal machinery in transiently transformed living plant cells. DOI: 10.1091/mbc.e04-01-0055 ; PMID: 15133128
- A plethora of plant serine/arginine-rich proteins: redundancy or evolution of novel gene functions? DOI: 10.1042/BST0320561 ; PMID: 15270675
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants. DOI: 10.1093/molbev/msj118 ; PMID: 16520337
- Differential expression of alternatively spliced mRNAs of Arabidopsis SR protein homologs, atSR30 and atSR45a, in response to environmental stress. DOI: 10.1093/pcp/pcm069 ; PMID: 17556373
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants. DOI: 10.1105/tpc.110.078352 ; PMID: 20884799
- Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing. DOI: 10.1371/journal.pone.0024542 ; PMID: 21935421
- Abscisic acid (ABA) regulation of Arabidopsis SR protein gene expression. DOI: 10.3390/ijms151017541 ; PMID: 25268622
- Members of SIAMESE-RELATED Class Inhibitor Proteins of Cyclin-Dependent Kinase Retard G2 Progression and Increase Cell Size in Arabidopsis thaliana. DOI: 10.3390/life12091356 ; PMID: 36143392
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: A0A1P8BF01
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BF01
- EnsemblPlants: AT5G18810.2
- Gramene: AT5G18810.2
- ExpressionAtlas: AT5G18810
- InterPro: IPR000504, IPR012677, IPR035979
- PANTHER: PTHR48034
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- SWISS-MODEL: A0A1P8BF01
Sequences
cDNA Sequence
- >AT5G18810.2
CCGGCAAGTGTTGTGTTTTGAAAAACTTTCACAGTCGTCGATTTCTTCCTCTCTCCCTCCAAAATTCACTCTCTAACTCGTTTTCCGACAGGGTTAGGGTTTTGCTATTCAATTGCTCCGAAGATTGGATTTGTTTGAGAAGAAGACCTAAGGAAGAGAAATCTTCGATGGCTAGAGCGAGAAGCCGGAGCAGAAGCTATAGTCCCCGTCCTCGTGACAGGTCACCACCTCGCGAACGGAAAGGCTACGACGATAATCGCCTCCGCGAACGTCCGTCTTCTCGTGATCACGAATCCTCTGGTCCTTCTGGTTTGCTTATCCGTAATCTCCCTCTCGATGCTAGGCCGAACGATCTTAGGGATTCGTTTGAACGGTTTGGTCCACTCAAGGACATATACCTGCCTAGGAATTATTATACTGGGGAGCCGAGAGGGTTTGGATTTGTTAAGTATCGTTATGCTGAAGATGCAGCTGAGGCAATGAAACGAATGAATCACAAAGTTATTGGTGGGCGTGAGATAGCCATTGTTTTCGCTGAGGAGAACCGGAAAACTCCACAAGAAATGCGTACTACTAACGGTACAAGTGGTCGACACGGGGACTACAAGAGGACTTCACACAGATCACCAAGGCGCAGATATCGTTCTCATTCACGTTCGCGTTCGCCTCCAAGGCGAGAGTCAAGGCATAGTAAAGTAAGAGAGGATGATTTGTACTCTCCTCGAAGAAGGTCAAGATCTATTTCACGTTCTCCTTTGCCTCGAAATGAGAGGGAATACAAGTCTAGAAACTGTAGAAGTCCTAGAGAGGAGAGGGTGCTTACTCCAATCAGGTCTCGATGTCTGTCAAGGTCCCGTTCTCGATCCTTAAGGTAAATAAATAGCTGCATTGTTATTTAATCTAAATGCCTCTCTAGATCAAGGACTAGAGC - >AT5G18810.1
CCGGCAAGTGTTGTGTTTTGAAAAACTTTCACAGTCGTCGATTTCTTCCTCTCTCCCTCCAAAATTCACTCTCTAACTCGTTTTCCGACAGGGTTAGGGTTTTGCTATTCAATTGCTCCGAAGATTGGATTTGTTTGAGAAGAAGACCTAAGGAAGAGAAATCTTCGATGGCTAGAGCGAGAAGCCGGAGCAGAAGCTATAGTCCCCGTCCTCGTGACAGGTCACCACCTCGCGAACGGAAAGGCTACGACGATAATCGCCTCCGCGAACGTCCGTCTTCTCGTGATCACGAATCCTCTGGTCCTTCTGGTTTGCTTATCCGTAATCTCCCTCTCGATGCTAGGCCGAACGATCTTAGGGATTCGTTTGAACGGTTTGGTCCACTCAAGGACATATACCTGCCTAGGAATTATTATACTGGGGAGCCGAGAGGGTTTGGATTTGTTAAGTATCGTTATGCTGAAGATGCAGCTGAGGCAATGAAACGAATGAATCACAAAGTTATTGGTGGGCGTGAGATAGCCATTGTTTTCGCTGAGGAGAACCGGAAAACTCCACAAGAAATGCGTACTACTAACGGTACAAGTGGTCGACACGGGGACTACAAGAGGACTTCACACAGATCACCAAGGCGCAGATATCGTTCTCATTCACGTTCGCGTTCGCCTCCAAGGCGAGAGTCAAGGCATAGTAAAGTAAGAGAGGATGATTTGTACTCTCCTCGAAGAAGGTCAAGATCTATTTCACGTTCTCCTTTGCCTCGAAATGAGAGGGAATACAAGTCTAGAAACTGTAGAAGTCCTAGAGAGGAGAGGGTGCTTACTCCAATCAGGTCTCGATGTCTGTCAAGGTCCCGTTCTCGATCCTTAAGGTAAATAAATAGCTGCATTGTTATTTAATCTAAATGCCTCTCTAGATCAAGGACTAGAGC
CDS Sequence
Protein Sequence