Information report for AT5G18660
Gene Details
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Functional Descriptions
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- pcb2 — plae-green phenotype. Growth rate severely reduced compared to wild-type. The thylakoid membranes are arranged in a disorderly fashion and do not develop distinct grana stacks; extensive adhesion of two to a few thylakoid membranes is observed instead. No distinct differences in the size and the number of chloroplasts between wild-type and mutant. Starch granules are not found in the mutant chloroplasts suggesting a reduction of photosynthetic activity.
Functional Keywords
- vascular leaf , flower , stem
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Green genes gleaned. DOI: 10.1016/j.tplants.2005.05.005 ; PMID: 15951223
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Transcriptional Regulation of Tetrapyrrole Biosynthesis in Arabidopsis thaliana. DOI: 10.3389/fpls.2016.01811 ; PMID: 27990150
- LLM-Domain B-GATA Transcription Factors Play Multifaceted Roles in Controlling Greening in Arabidopsis. DOI: 10.1105/tpc.17.00947 ; PMID: 29453227
- Arabidopsis transcription factor TCP4 represses chlorophyll biosynthesis to prevent petal greening. DOI: 10.1016/j.xplc.2022.100309 ; PMID: 35605201
- Chloroplast-localized PITP7 is essential for plant growth and photosynthetic function in Arabidopsis. DOI: 10.1111/ppl.13760 ; PMID: 36004734
- Shade represses photosynthetic genes by disrupting the DNA binding of GOLDEN2-LIKE1. DOI: 10.1093/plphys/kiad029 ; PMID: 36702576
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Identification of a vinyl reductase gene for chlorophyll synthesis in Arabidopsis thaliana and implications for the evolution of Prochlorococcus species. DOI: 10.1105/tpc.104.027276 ; PMID: 15632054
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654G276
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A654G276
- EnsemblPlants: AT5G18660.1
- Gramene: AT5G18660.1
- KEGG: ath:AT5G18660
- Orthologous matrix: ASFIVDC
- ExpressionAtlas: AT5G18660
- InterPro: IPR016040, IPR036291, IPR044201
- PANTHER: PTHR47378, PTHR47378:SF1
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- OrthoDB: A0A654G276
- SWISS-MODEL: A0A654G276
- Conserved Domain Database: cd05243
Sequences
cDNA Sequence
- >AT5G18660.1
CGAAATAACGTAAAATACTTTGTCTGTTTTGGAAATTATATTATCTGTGTTCTGAGGATGAAGAAGAAGATCAAACGAGTTGCTACAATGGCCTCACACTAGGATCTTCACTTTCTCGCACTTTCCCTCTCATTTTCCCGATCATAGAAACAGCATTGTACAGAGATTTCAAAGAATGTCACTTTGCTCTTCCTTCAACGTATTCGCTTCCTACTCACCAAAACCCAAAACCATCTTCAAAGATTCCAAATTCATTTCACAATTTCAGGTAAAGTCGTCTCCTTTAGCTTCAACATTCCACACAAATGAATCCTCAACGAGTCTTAAGTATAAGAGAGCGAGACTCAAACCAATTTCATCTCTAGACTCGGGAATTTCAGAAATCGCTACATCACCTTCATTCAGGAACAAAAGCCCTAAAGATATAAACGTTTTAGTGGTTGGTTCAACTGGGTACATAGGTAGATTTGTAGTGAAAGAGATGATCAAAAGAGGGTTCAATGTGATTGCTGTTGCGAGAGAGAAGAGTGGGATTAGAGGCAAAAACGACAAGGAAGAGACTTTGAAGCAATTACAAGGCGCCAATGTGTGTTTCTCTGATGTTACTGAGTTAGATGTTCTTGAGAAATCTATTGAGAATCTAGGATTTGGTGTTGATGTTGTTGTTTCCTGTCTCGCTAGTCGTAATGGAGGGATTAAAGATTCGTGGAAGATTGATTATGAAGCTACCAAAAACAGTCTTGTAGCTGGGAAGAAGTTTGGTGCTAAGCATTTTGTTTTGCTCTCTGCGATTTGTGTGCAGAAGCCTTTACTGGAGTTTCAGAGAGCGAAACTGAAGTTCGAAGCAGAGTTGATGGATTTGGCTGAGCAACAAGACTCTAGCTTTACATACAGCATTGTGAGACCAACGGCTTTTTTCAAGAGCTTAGGTGGTCAAGTTGAGATTGTGAAAGATGGGAAACCTTACGTGATGTTTGGAGATGGTAAGCTATGCGCTTGTAAACCGATCAGCGAACAAGATTTAGCAGCGTTTATAGCGGATTGCGTGTTGGAAGAGAACAAGATCAATCAAGTTTTGCCAATTGGTGGACCAGGCAAGGCATTAACGCCATTAGAGCAAGGAGAGATTCTGTTTAAGATTCTTGGGAGAGAGCCTAAGTTCTTGAAAGTACCTATCGAGATTATGGATTTTGTGATTGGTGTTCTCGATTCTATTGCAAAGATCTTTCCTTCGGTTGGAGAGGCTGCCGAATTTGGGAAGATTGGAAGGTATTACGCCGCAGAGAGTATGTTGATTCTTGATCCAGAGACTGGAGAGTATAGCGAGGAGAAGACACCGAGTTACGGGAAAGACACGCTTGAGGATTTCTTTGCGAAAGTGATCAGAGAAGGCATGGCGGGTCAAGAACTCGGTGAACAGTTCTTCTAGTATGAATTGTTTTTGTGCGAAATGAGTTTGCTGTGTAGTTTGTAACTGATGAGATTATAAATATAAAACCTGTGAATTTGAGAGATTCGTTGATTCAAACAACAACAAAAACACACATTGCAGAGATATGGTATAACCTATGGATCTTTTGCAGAGAGAAGA
CDS Sequence
Protein Sequence