Information report for AT5G18570
Gene Details
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Functional Descriptions
- GO:0000287 — enables — magnesium ion binding
- GO:0009706 — located in — chloroplast inner membrane
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0009570 — located in — chloroplast stroma
- GO:0006364 — acts upstream of or within — rRNA processing
- GO:0009507 — located in — chloroplast
- GO:0003729 — enables — mRNA binding
- GO:0003924 — enables — GTPase activity
- GO:0005525 — enables — GTP binding
- CS3051 — developmental arrest of mutant embryos occurs at globular stage; white seeds and embryos; 25.0% mutant.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- A chloroplast-localized vesicular transport system: a bio-informatics approach. DOI: 10.1186/1471-2164-5-40 ; PMID: 15236667
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- AtObgC, a plant ortholog of bacterial Obg, is a chloroplast-targeting GTPase essential for early embryogenesis. DOI: 10.1007/s11103-009-9529-3 ; PMID: 19636801
- Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. DOI: 10.1371/journal.pone.0007386 ; PMID: 19812694
- Is there a COPII-mediated membrane traffic in chloroplasts? DOI: 10.1111/j.1600-0854.2010.01129.x ; PMID: 21040296
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- New putative chloroplast vesicle transport components and cargo proteins revealed using a bioinformatics approach: an Arabidopsis model. DOI: 10.1371/journal.pone.0059898 ; PMID: 23573218
- Evidence for lateral gene transfer (LGT) in the evolution of eubacteria-derived small GTPases in plant organelles. DOI: 10.3389/fpls.2014.00678 ; PMID: 25566271
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
Gene Resources
- UniProt: A0A178UG16
- EMBL: CACRSJ010000110, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UG16
- EnsemblPlants: AT5G18570.1
- Gramene: AT5G18570.1
- KEGG: ath:AT5G18570
- Orthologous matrix: HVQRCRV
- ExpressionAtlas: AT5G18570
- InterPro: IPR006073, IPR006074, IPR006169
- PANTHER: PTHR11702, PTHR11702:SF44
- SUPFAM: SSF102741, SSF52540, SSF82051
- PROSITE: PS00905, PS51710, PS51881
- Gene3D: 2.70.210.12, 3.30.300.350, 3.40.50.300
- SWISS-MODEL: A0A178UG16
- Conserved Domain Database: cd01898
Sequences
cDNA Sequence
- >AT5G18570.1
TATAAGTCCTCAATTTTATACTACTTTTGATTGTAACCCCCTTTACTTTGAAAAATCAATATTTAGTACAAAATGTTGTTTATATCACATAAAGTCCCGTTAAGATTTATCAGAGAAACAAATGGCTTCCATATCCATTAACTGTTTCTTCACTCCTCAAGCTCTAGCCCGACCCAGTAGGACGAGGAAGATTTTCGCTAAACCTGACAAAGTCTCGGGAAGAACCCGAAGCCCTAGAAAAACGAAGCTTCAACGCGAAGTCGAGCTTAAATCTCGAGGCGGTGATAAACTCCAGCCAGTTTCTGATGCCGGCGGCGAAGCCACTACTTATACACGTCTTCCTCCTAGGGAAGATTACTATGATGTCTCTCTTTTGTCTTCATCTTATTTAAAAGTTTCTGAAGAAGTGAAGCTATCTGAGTCCAATGTCGCGAGGGTTGAGGAAAAGATTGAAACTTTGAGGGAAATTGAGGAAGAAGAGAAAGAAAAGGAGGTGAAGAGTTATGATGATGATGATATTTGGGGAAATTACAGAAGATTAGATGTGTTTGAAGGGAGTTCAAGATCAATTGATGAAGATGATGAAGATTGGGAAGACGAAGTGTTTGAGTATGGTGATGAAACTGATGCGGAGAAAGATGATAGTGAAGGGTCTGAATTGAAGGATGGAGAAGTGTTATGTTTCTCCGGTGAAGAGGAAGAGGATGAAATTGGGGTGAAGGAGAAAGGAGTTCCGGCTGTGATGAGGTGTTTCGATAGAGCGAAGATATATGTTAGAGCCGGAGATGGAGGGAATGGTGTGGTGGCGTTTAGGAGAGAAAAGTTTGTTCCTTTTGGAGGACCTTCAGGTGGAGATGGAGGGAGAGGAGGGAATGTGTATGTAGAGGTTGATGGGTCTATGAATTCGTTGTTGCCATTTCGCAAGAGTGTGCATTTCAGGGCGGGACGTGGGGAACATGGGAGAGGGAAGATGCAGAGTGGAGCTAAAGGTGATAATGTCGTGGTGAAAGTGGCTCCTGGGACGGTGGTTAGACAGGCTAGAGAGGTTGGGAGTGAGGTGGAGGGTGAGGAAGGGGAGGAGAAGGAGGTGCTTTTGGAGTTGTTGCATCCGGGACAGAGGGCGTTGTTGTTGCCTGGAGGGAGAGGTGGACGAGGGAATGCTTCGTTTAAGTCGGGGATGAATAAAGTTCCTAGGATTGCTGAGAATGGCGAAGAAGGTCCTGAAATGTGGCTGGACTTAGAACTGAAACTGGTCGCAGACGTAGGTATTGTGGGTGCTCCAAATGCAGGAAAAAGCACATTGTTGAGCGTGATAAGTGCCGCACAGCCAACCATAGCAAATTACCCATTCACCACATTACTTCCCAATCTAGGTGTGGTTTCATTTGATTACGATTCAACAATGGTGGTCGCAGATCTTCCTGGTTTGCTCGAAGGAGCGCACAGAGGCTTCGGTTTAGGCCATGAGTTTCTTCGGCACACTGAGAGATGTTCAGCACTGGTACATGTTGTGGATGGTTCAGCTCCACAACCTGAACTTGAGTTTGAAGCTGTTCGTCTCGAACTCGAACTATTCAGTCCTGAGATCGCCGAGAAGCCTTACGTAGTGGCATACAACAAAATGGACCTCCCAGATGCTTACGAGAAGTGGCCAATGTTTCAAGAAACTCTCCGTGCCCGTGGGATTGAACCTTTTTGTATGAGCGCAGTACAAAGAGAAGGTACACATGAAGTAATCTCGTCCGTTTATGAACTCCTGAAGAAGTACAGAGCAGCCAATGCAGAACCCAAAGCATTGTTCGATCAAGCAAATGAGAATCTGGACCATGTAGCTAAGAAGATTGATAAGGAACGACGAGCAGCCATTAATGAGTTTGAGGTCTTCCGCGATAGCGGTACTAGGGCTTGGCATGTAGTTGGAGCCGGGCTTCAACGTTTTGTCCAGATGACTAACTGGAGGTACATGGATTCAGACAAAAGGTTTCAGCATGTACTTGATGCTTGTGGTGTGAATAAATCACTGAAGAATATGGGCGTTAAAGAAGGCGATACCGTCATCGTAGGAGAGATGGAGTTGATATGGCATGATTCAGCCAATGGCTCGAGCCGTCCCACAGATTCAAACAAGACTTCGACAGACTCAGTCAGATGGCCTCAATGGAAATGAACCATTTAAGGTCTCTCTTGGTGTTAGACTGTTTCTTTAACCGACGAAGGAAGTGAATCAGATTACTTTTTCGGTCATTGGATTGAACCGGTCGCAGATCATTGAATCAATTTTTTTAGATGTACTATTATAATGTAGAGATGACGTATTTATAATTATCTATATATACATTTTTGCAACACTTTTATGAAATAAATCCTCAAGTTGAGGATTTATTTACAATCCAATGTCATTGGCATTTAATATTTTAACAATTTTATTCTCAAA
CDS Sequence
Protein Sequence