Information report for AT5G18420
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0030014 — part of — CCR4-NOT complex
- GO:0003674 — enables — molecular_function
Functional Keywords
Literature and News
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of Arabidopsis CCR4-NOT Complexes with Pumilio RNA-Binding Proteins, APUM5 and APUM2. DOI: 10.1093/pcp/pcz089 ; PMID: 31093672
Gene Resources
- UniProt: B4F7N8
- EMBL: BT033121, CP002688
- AlphaFoldDB: B4F7N8
- EnsemblPlants: AT5G18420.2
- Gramene: AT5G18420.2
- ExpressionAtlas: AT5G18420
- InterPro: IPR019312
- PANTHER: PTHR15975, PTHR15975:SF0
- SWISS-MODEL: B4F7N8
Sequences
cDNA Sequence
- >AT5G18420.2
CTACAGAGAGATAGATTGGGAATTGAATTTGGGAATCCAGGTTTAGGGATGAATCGATCAACGATGATGATTATGAGGATTGAAGAGTCGGCGATTGTTTTGTCTCTGCTCAAATCGGATCTCCGGCCGATGGAAGACGTTTTATCGGAATTCGACTCTAAGTTCGAAAGCGCTCGTTACCTCAGTGTCTGCAATTCTCTTTCCATGATGTTGCAGGATCAGCAGATGTTTAAGAATACTGAACGTCTAATTGCATTTGGTATCATATACCAGTGTTATTCTTCACAGAAGCCATCTTTCAACCCGTTTTTATCTGAAATGATAAGTGCTGCTTGTAATGAACAGCTGGAAAAGTCTGAAAGGGCATTTCTTCTCCACCTGTTACAATGGAATAGTTACAACAACGTGAAAGAGATTCTCAAACTCTCAGCTGTTGATTATATCAGATCGTTTGATCCTTCAACTCATGATTTTCCGGAACTAGGAGAGCTGCAACGAGAGTATGGCGACAAAGCCGATCCTGGACCATCTAGTCACATTTTTGCAGACTATTCCCTGAAAAAGCTATTGCATGATCCTGATGTTCCTCGTGGGTGTGATCCTAACTCTCCAGAGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGTCCTAGGTGGATCCGTCCATGTCCACCAAGGTACCCAGTTCATCAGAGCGAGTTGCTTTGGATTGACCCTGATAACAAGCATGAGCTTGTTTGGGACGATAAAATGTGTGCTGATACTAGCAGTGGTGCAACAGTTAGAGACTTGCTTGTTAAGGGTTTAAAGGTGACACTTTCACCTACGGAGCAAGAGGACATCATTACAGAATTGGCAAATGACCCAAAGCTTGTCTTTCACTGCGGAATAACTCCACGGAAGCTGCCGCAATTAGTAGAGCACAATCCTCAGATAGCAGTTGAAATTCTCACCAAGTTGAATAACTCCACAGAGATTAATGACTATTATGAAGCTCTAGGAAATATGGACATGAGCCTGCACTCAATGGAAGTTGTGAATAGGCTCACAACTGCAGTTGAACTTCCCAAGGACTTCATACGGATGTACATCACTAATTGCATATCGTCTTGTGAGAACGCTAAGCAGCAAGACAAATACATGCAGAATAGGCTTGTACGGCTTGTTTGCGTCTTCTTGCAAAGCTTAATTCGTAACAAGATCATCAACGTGAAGGATCTATTCATAGAAGTTCAAGCTTTCTGCATTGAGTTTTCTCGGGTTCGAGAAGCAGCTGGTCTCTTCAGGCTTTTGAAACAATTGGATGAATAATTTACTCTTTCTTCTTCTTCTTCTTCTTCTAATCATCTTCGTCTCCATTTTATTGTATTCCCTATTTTTGTAGCTAAAGAAAGTACTTTATTTTGAATCCAAGACAGTTTTCGCTTTTTCTAGAGTTTCATTCTCAATTCATATGTTTTTACAAC - >AT5G18420.1
CTACAGAGAGATAGATTGGGAATTGAATTTGGGAATCCAGGTTTAGGGATGAATCGATCAACGATGATGATTATGAGGATTGAAGAGTCGGCGATTGTTTTGTCTCTGCTCAAATCGGATCTCCGGCCGATGGAAGACGTTTTATCGGAATTCGACTCTAAGTTCGAAAGCGCTCGTTACCTCAGTGTCTGCAATTCTCTTTCCATGATGTTGCAGGATCAGCAGATGTTTAAGAATACTGAACGTCTAATTGCATTTGGTATCATATACCAGTGTTATTCTTCACAGAAGCCATCTTTCAACCCGTTTTTATCTGAAATGATAAGTGCTGCTTGTAATGAACAGCTGGAAAAGTCTGAAAGGGCATTTCTTCTCCACCTGTTACAATGGAATAGTTACAACAACGTGAAAGAGATTCTCAAACTCTCAGCTGTTGATTATATCAGATCGTTTGATCCTTCAACTCATGATTTTCCGGAACTAGGAGAGCTGCAACGAGAGTATGGCGACAAAGCCGATCCTGGACCATCTAGTCACATTTTTGCAGACTATTCCCTGAAAAAGCTATTGCATGATCCTGATGTTCCTCGTGGGTGTGATCCTAACTCTCCAGAGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGTCCTAGGTGGATCCGTCCATGTCCACCAAGGTACCCAGTTCATCAGAGCGAGTTGCTTTGGATTGACCCTGATAACAAGCATGAGCTTGTTTGGGACGATAAAATGTGTGCTGATACTAGCAGTGGTGCAACAGTTAGAGACTTGCTTGTTAAGGGTTTAAAGGTGACACTTTCACCTACGGAGCAAGAGGACATCATTACAGAATTGGCAAATGACCCAAAGCTTGTCTTTCACTGCGGAATAACTCCACGGAAGCTGCCGCAATTAGTAGAGCACAATCCTCAGATAGCAGTTGAAATTCTCACCAAGTTGAATAACTCCACAGAGATTAATGACTATTATGAAGCTCTAGGAAATATGGACATGAGCCTGCACTCAATGGAAGTTGTGAATAGGCTCACAACTGCAGTTGAACTTCCCAAGGACTTCATACGGATGTACATCACTAATTGCATATCGTCTTGTGAGAACGCTAAGCAGCAAGACAAATACATGCAGAATAGGCTTGTACGGCTTGTTTGCGTCTTCTTGCAAAGCTTAATTCGTAACAAGATCATCAACGTGAAGGATCTATTCATAGAAGTTCAAGCTTTCTGCATTGAGTTTTCTCGGGTTCGAGAAGCAGCTGGTCTCTTCAGGCTTTTGAAACAATTGGATGAATAATTTACTCTTTCTTCTTCTTCTTCTTCTTCTAATCATCTTCGTCTCCATTTTATTGTATTCCCTATTTTTGTAGCTAAAGAAAGTACTTTATTTTGAATCCAAGACAGTTTTCGCTTTTTCTAGAGTTTCATTCTCAATTCATATGTTTTTACAAC - >AT5G18420.3
CTACAGAGAGATAGATTGGGAATTGAATTTGGGAATCCAGGTTTAGGGATGAATCGATCAACGATGATGATTATGAGGATTGAAGAGTCGGCGATTGTTTTGTCTCTGCTCAAATCGGATCTCCGGCCGATGGAAGACGTTTTATCGGAATTCGACTCTAAGTTCGAAAGCGCTCGTTACCTCAGTGTCTGCAATTCTCTTTCCATGATGTTGCAGGATCAGCAGATGTTTAAGAATACTGAACGTCTAATTGCATTTGGTATCATATACCAGTGTTATTCTTCACAGAAGCCATCTTTCAACCCGTTTTTATCTGAAATGATAAGTGCTGCTTGTAATGAACAGCTGGAAAAGTCTGAAAGGGCATTTCTTCTCCACCTGTTACAATGGAATAGTTACAACAACGTGAAAGAGATTCTCAAACTCTCAGCTGTTGATTATATCAGATCGTTTGATCCTTCAACTCATGATTTTCCGGAACTAGGAGAGCTGCAACGAGAGTATGGCGACAAAGCCGATCCTGGACCATCTAGTCACATTTTTGCAGACTATTCCCTGAAAAAGCTATTGCATGATCCTGATGTTCCTCGTGGGTGTGATCCTAACTCTCCAGAGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGTCCTAGGTGGATCCGTCCATGTCCACCAAGGTACCCAGTTCATCAGAGCGAGTTGCTTTGGATTGACCCTGATAACAAGCATGAGCTTGTTTGGGACGATAAAATGTGTGCTGATACTAGCAGTGGTGCAACAGTTAGAGACTTGCTTGTTAAGGGTTTAAAGGTGACACTTTCACCTACGGAGCAAGAGGACATCATTACAGAATTGGCAAATGACCCAAAGCTTGTCTTTCACTGCGGAATAACTCCACGGAAGCTGCCGCAATTAGTAGAGCACAATCCTCAGATAGCAGTTGAAATTCTCACCAAGTTGAATAACTCCACAGAGATTAATGACTATTATGAAGCTCTAGGAAATATGGACATGAGCCTGCACTCAATGGAAGTTGTGAATAGGCTCACAACTGCAGTTGAACTTCCCAAGGACTTCATACGGATGTACATCACTAATTGCATATCGTCTTGTGAGAACGCTAAGCAGCAAGACAAATACATGCAGAATAGGCTTGTACGGCTTGTTTGCGTCTTCTTGCAAAGCTTAATTCGTAACAAGATCATCAACGTGAAGGATCTATTCATAGAAGTTCAAGCTTTCTGCATTGAGTTTTCTCGGGTTCGAGAAGCAGCTGGTCTCTTCAGGCTTTTGAAACAATTGGATGAATAATTTACTCTTTCTTCTTCTTCTTCTTCTTCTAATCATCTTCGTCTCCATTTTATTGTATTCCCTATTTTTGTAGCTAAAGAAAGTACTTTATTTTGAATCCAAGACAGTTTTCGCTTTTTCTAGAGTTTCATTCTCAATTCATATGTTTTTACAAC - >AT5G18420.4
CTACAGAGAGATAGATTGGGAATTGAATTTGGGAATCCAGGTTTAGGGATGAATCGATCAACGATGATGATTATGAGGATTGAAGAGTCGGCGATTGTTTTGTCTCTGCTCAAATCGGATCTCCGGCCGATGGAAGACGTTTTATCGGAATTCGACTCTAAGTTCGAAAGCGCTCGTTACCTCAGTGTCTGCAATTCTCTTTCCATGATGTTGCAGGATCAGCAGATGTTTAAGAATACTGAACGTCTAATTGCATTTGGTATCATATACCAGTGTTATTCTTCACAGAAGCCATCTTTCAACCCGTTTTTATCTGAAATGATAAGTGCTGCTTGTAATGAACAGCTGGAAAAGTCTGAAAGGGCATTTCTTCTCCACCTGTTACAATGGAATAGTTACAACAACGTGAAAGAGATTCTCAAACTCTCAGCTGTTGATTATATCAGATCGTTTGATCCTTCAACTCATGATTTTCCGGAACTAGGAGAGCTGCAACGAGAGTATGGCGACAAAGCCGATCCTGGACCATCTAGTCACATTTTTGCAGACTATTCCCTGAAAAAGCTATTGCATGATCCTGATGTTCCTCGTGGGTGTGATCCTAACTCTCCAGAGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGTCCTAGGTGGATCCGTCCATGTCCACCAAGGTACCCAGTTCATCAGAGCGAGTTGCTTTGGATTGACCCTGATAACAAGCATGAGCTTGTTTGGGACGATAAAATGTGTGCTGATACTAGCAGTGGTGCAACAGTTAGAGACTTGCTTGTTAAGGGTTTAAAGGTGACACTTTCACCTACGGAGCAAGAGGACATCATTACAGAATTGGCAAATGACCCAAAGCTTGTCTTTCACTGCGGAATAACTCCACGGAAGCTGCCGCAATTAGTAGAGCACAATCCTCAGATAGCAGTTGAAATTCTCACCAAGTTGAATAACTCCACAGAGATTAATGACTATTATGAAGCTCTAGGAAATATGGACATGAGCCTGCACTCAATGGAAGTTGTGAATAGGCTCACAACTGCAGTTGAACTTCCCAAGGACTTCATACGGATGTACATCACTAATTGCATATCGTCTTGTGAGAACGCTAAGCAGCAAGACAAATACATGCAGAATAGGCTTGTACGGCTTGTTTGCGTCTTCTTGCAAAGCTTAATTCGTAACAAGATCATCAACGTGAAGGATCTATTCATAGAAGTTCAAGCTTTCTGCATTGAGTTTTCTCGGGTTCGAGAAGCAGCTGGTCTCTTCAGGCTTTTGAAACAATTGGATGAATAATTTACTCTTTCTTCTTCTTCTTCTTCTTCTAATCATCTTCGTCTCCATTTTATTGTATTCCCTATTTTTGTAGCTAAAGAAAGTACTTTATTTTGAATCCAAGACAGTTTTCGCTTTTTCTAGAGTTTCATTCTCAATTCATATGTTTTTACAAC
CDS Sequence
Protein Sequence