Gene Details:
- Gene ID: AT5G18340
- Gene Symbol: PUB48
- Gene Name: Plant U-Box 48
- Description: ARM repeat superfamily protein;(source:Araport11)
- TAIR Accession: locus:2146213
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0005634 — colocalizes with — nucleus
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005737 — is active in — cytoplasm
- GO:1900034 — acts upstream of or within — regulation of cellular response to heat
- GO:0004842 — enables — ubiquitin-protein transferase activity
Germplasm Phenotype:
- SALK_057909C — Increased sensitivity to water deprivation.
- SALK_086659 — Seeds fail to germinate after heat shock.
Function-related keywords:
Literature:
- Decoys provide a scalable platform for the identification of plant E3 ubiquitin ligases that regulate circadian function. DOI: 10.7554/eLife.44558 ; PMID: 30950791
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
- Overexpression mutants reveal a role for a chloroplast MPD protein in regulation of reactive oxygen species during chilling in Arabidopsis. DOI: 10.1093/jxb/erac029 ; PMID: 35084440
Sequences:
cDNA Sequence
- >AT5G18340.1
CAGAAATAAAAAGAAGCAGAGGAAGAAGAATAACTGATTTACATAACAGTTATTTCTTGGCTTCTCTGATTCTCGAAGTTTCTAGTGTTCTTTGCTTTTATTTCTCTACGTTTATCGAGAAATCTCCGGGCTGAAAATGGCGGATTCGACGGCGGACGCGACGGAAACAAACGCCGATACTCTGACACTGAGGCGGGAGTTGAAGAAGGTACTGACGGAGAATTTAAACGACGGAGGAGTTAAAGATCGCGTTGAGACCGTGAAATCGATTGATGAGGCGATTAGAATCCTGAATCGACTGAAGATAGTAGAATCGAAGAAGCGGAAGCGGGAATCTGATAGTTCTTCGGTTGAAGTTCCGAAAGAGTTCAAGTGTACACTCTCGAAGACGATCATGATCGATCCTGTGATCATATTTTCTGGGCAGACGTATGAAAAGAGATATATCACAGAGTGGCTGAACCATGACCTTACATGTCCCACAGCCAAACAAGTCCTTTATCGAGTTTGTTTGACACCCAACCATTTGATCAATGAGTTGATTACGCGATGGTGTCTTGCTAACAAATATGATCGGCCAGCCCCAAAACCATCTGATATTGACTATGTAACGGAGCTGTTCACTGATGGCATCGAATCGTTGCTTCAGCGGATTTCCTCTCCTTCCTCCTCGGTTGCAGATCAGACAGAAGCTGCAAAAGAGCTAGCCCTCCAGACCGAAAAATTTGTCAATGTCCGTGACTTCTTTATCAAGGAACTCCCTGATTCGATCACCAGGTTACTCACTCCGCTCTCTGTTTTGGGCGATGAGGTAGACTCGAATCCCGAGCTTCAAGAGAATATCGTCACAGCGTTGTTCAACATGTCGACTTTCGAGAAGAATAAAACAGTACTTGCTGAAAACCATCAAGTGATCCCACTGCTTGCAAAGTCTATGAAGCAGGGGTCAGTTGTGACAAGAAGAAACGCTACATTGACTTTAGCGTCACTTTCAGACATTGATTCTAACAAGATCATCATAGGGAACTCGGTAGCACTCAAGGCTCTGATAGATCTAATCGGGGAGTTGGATGACTTATCAGCTACTCATGATGCTCTTTGCGCTGTTATAGACCTCTGTTGTGATGAAAGGGAGAACTGGAAAAAGGCGATCTCGTTGGGGTTGGCTCCTGCTGCAATCAAAAATATCAAAGCAAGAAGAAATTTGTTTGAATCCTTAGCTGCCTTGGCATTGATTTCTCCACACGAACGCGTTATCCAGGAAGTGGCTAATCTAGGGGTTATCTATGATCTGTTAAGTATCTTGAGGAAAACAAGTTGCATGGTGACTTGTGAGAACGCTGTAGTGATCGTAGGCAACATGTATGCTAAAAGCAGAGAAAGGTCTATTAAGAAAATCCTGGCAGAAGAGGAGAATCAACACAAGACATTTACAAAGATTGCAACGCAAGGATCAGTTGTTGCGGTGATGAAAGCACAAGGGATTTTACAGTGTATTAACTATTAGGGTATTCCCTGCTGGTATGGAGCCACAGAGGGCATGACGGAATCATCAAAACTAAGGTCTTGTTAATACCTTAATAGTTTCAGCAAAGTTACATTTGATACATATACAGATGAAAGTGTAGAAAGAAAGAATTCGAGTTGAAAGTAGAAGAATTTGAGACTTGTAATCTAGGGATTGTTGTTGCTCTTTTTTTGGTGCAAGGGATTGTTGTTGTTTATATCGCTTGAAATACTTTACGAAAAAAATACTCAAGATTAAAATACTTCAACTTCTCTTGTTTACATTATATCAAAA
CDS Sequence
Protein Sequence