Information report for AT5G18290
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- GO:0006833 — acts upstream of or within — water transport
- GO:0055085 — acts upstream of or within — transmembrane transport
- GO:0005783 — located in — endoplasmic reticulum
- GO:0009507 — located in — chloroplast
- GO:0055085 — involved in — transmembrane transport
- GO:0015250 — enables — water channel activity
Functional Keywords
- root , fruit , root , portion of vascular tissue , stamen , petal , flower , root , vascular leaf , flower
Literature and News
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling. DOI: 10.1104/pp.104.046482 ; PMID: 15347784
- The ER-localized aquaporin SIP2;1 is involved in pollen germination and pollen tube elongation in Arabidopsis thaliana. DOI: 10.1007/s11103-019-00865-3 ; PMID: 30963359
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- Whole gene family expression and drought stress regulation of aquaporins. DOI: 10.1007/s11103-005-0352-1 ; PMID: 16235111
Gene Resources
- UniProt: A0A5S9Y5U6
- EMBL: CACSHJ010000096
- AlphaFoldDB: A0A5S9Y5U6
- EnsemblPlants: AT5G18290.1, AT5G18290.2
- Gramene: AT5G18290.1, AT5G18290.2
- KEGG: ath:AT5G18290
- Orthologous matrix: VYWISSY
- ExpressionAtlas: AT5G18290
- InterPro: IPR000425, IPR023271, IPR044222
- PANTHER: PTHR46739, PTHR46739:SF5
- SUPFAM: SSF81338
- Gene3D: 1.20.1080.10
- OrthoDB: A0A5S9Y5U6
- SWISS-MODEL: A0A5S9Y5U6
Sequences
cDNA Sequence
- >AT5G18290.1
GTTAATCAGAGCATAAGGATTTCATCTTTTTCTCTACAAACTTTTCAATTATCTTTTTCTAAGAGTTACAAAAGTATATTTGTTTTCTATATAAATTTGGGATAGTCTATCTACATTTCTACAAAATTCAGCTAACCGTTAGGTGAGTCACTCATAGTCATACATATCTTCCTTCTATATAAAAAAAGAATATTAGTTTTGAGTGGACTGATAAATATATTCTTTTCAACAAGAAGAAAACAATCTTCTTAAACCCAAACGTTCAAGAAAAAGAAAAAAAAACGATACTTACGATGAGTGCGGTAAAATCGGCGTTAGGTGATATGGTGATAACCTTTTTGTGGGTTATTCTCTCGGCGACGTTTGGGATACAGACGGCGGCGATTGTTTCCGCCGTAGGGTTTCATGGTATCACTTGGGCTCCTCTTGTGATCTCAACGTTGGTTGTTTTTGTCTCCATCTCGATTTTTACGGTTATTGGAAACGTTCTTGGTGGTGCTAGCTTCAATCCTTGTGGAAACGCAGCGTTTTATACCGCCGGTGTTTCCAGTGATTCTCTCTTCTCCTTGGCCATTAGATCTCCTGCTCAGGCAATTGGTGCGGCAGGCGGTGCGATAACGATCATGGAGATGATACCGGAAAAGTATAAGACTAGGATTGGAGGAAAGCCTTCATTGCAATTTGGTGCACACAATGGAGCTATTTCTGAAGTGGTCCTAAGTTTTAGTGTTACATTTTTGGTTTTACTAATTATCCTAAGAGGTCCTCGAAAACTGCTCGCGAAAACGTTCTTGCTCGCACTCGCTACCGTATCGGTGTTTGTCGTAGGTTCTAAATTCACTAGACCATTCATGAATCCTGCCATTGCGTTTGGGTGGGCATATATCTACAAGTCTCACAACACATGGGACCATTTTTATGTGTATTGGATCAGCTCCTACACCGGAGCTATTTTATCTGCGATGCTCTTTAGAATTATATTTCCGGCTCCACCTCTGGTTCAGAAAAAACAGAAGAAAGCTTGAGAAAAAAATGGAAAAATCTAAGTAAAAATTTCATGAATCATAATCCCATTTGTTGTATGTTTTATGCTGTTGTCGTATTTGTACTTAATTTATAGTTTATAGCCCAAAAAAAAAATTCGTTTCTTTTTAAAATTTATGGATTCACATTTTCTCGGTTAGTGCGTAATCTA - >AT5G18290.2
GTTAATCAGAGCATAAGGATTTCATCTTTTTCTCTACAAACTTTTCAATTATCTTTTTCTAAGAGTTACAAAAGTATATTTGTTTTCTATATAAATTTGGGATAGTCTATCTACATTTCTACAAAATTCAGCTAACCGTTAGGTGAGTCACTCATAGTCATACATATCTTCCTTCTATATAAAAAAAGAATATTAGTTTTGAGTGGACTGATAAATATATTCTTTTCAACAAGAAGAAAACAATCTTCTTAAACCCAAACGTTCAAGAAAAAGAAAAAAAAACGATACTTACGATGAGTGCGGTAAAATCGGCGTTAGGTGATATGGTGATAACCTTTTTGTGGGTTATTCTCTCGGCGACGTTTGGGATACAGACGGCGGCGATTGTTTCCGCCGTAGGGTTTCATGGTATCACTTGGGCTCCTCTTGTGATCTCAACGTTGGTTGTTTTTGTCTCCATCTCGATTTTTACGGTTATTGGAAACGTTCTTGGTGGTGCTAGCTTCAATCCTTGTGGAAACGCAGCGTTTTATACCGCCGGTGTTTCCAGTGATTCTCTCTTCTCCTTGGCCATTAGATCTCCTGCTCAGGCAATTGGTGCGGCAGGCGGTGCGATAACGATCATGGAGATGATACCGGAAAAGTATAAGACTAGGATTGGAGGAAAGCCTTCATTGCAATTTGGTGCACACAATGGAGCTATTTCTGAAGTGGTCCTAAGTTTTAGTGTTACATTTTTGGTTTTACTAATTATCCTAAGAGGTCCTCGAAAACTGCTCGCGAAAACGTTCTTGCTCGCACTCGCTACCGTATCGGTGTTTGTCGTAGGTTCTAAATTCACTAGACCATTCATGAATCCTGCCATTGCGTTTGGGTGGGCATATATCTACAAGTCTCACAACACATGGGACCATTTTTATGTGTATTGGATCAGCTCCTACACCGGAGCTATTTTATCTGCGATGCTCTTTAGAATTATATTTCCGGCTCCACCTCTGGTTCAGAAAAAACAGAAGAAAGCTTGAGAAAAAAATGGAAAAATCTAAGTAAAAATTTCATGAATCATAATCCCATTTGTTGTATGTTTTATGCTGTTGTCGTATTTGTACTTAATTTATAGTTTATAGCCCAAAAAAAAAATTCGTTTCTTTTTAAAATTTATGGATTCACATTTTCTCGGTTAGTGCGTAATCTA
CDS Sequence
Protein Sequence