Information report for AT5G18240
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0005417 — phloem — floema (Spanish, exact), portion of phloem tissue (exact), 師部、師管 (Japanese, exact)
- GO:0005739 — located in — mitochondrion
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0005515 — enables — protein binding
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Cloning by pathway activation in yeast: identification of an Arabidopsis thaliana F-box protein that can turn on glucose repression. DOI: 10.1023/a:1014440531842 ; PMID: 12008900
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Arabidopsis Myb genes MYR1 and MYR2 are redundant negative regulators of flowering time under decreased light intensity. DOI: 10.1111/j.1365-313X.2011.04508.x ; PMID: 21255164
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A1P8BEW2
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BEW2
- EnsemblPlants: AT5G18240.6
- Gramene: AT5G18240.6
- ExpressionAtlas: AT5G18240
- InterPro: IPR025756, IPR046955
- PANTHER: PTHR31499, PTHR31499:SF46
- Gene3D: 1.10.10.60
- OrthoDB: A0A1P8BEW2
- SWISS-MODEL: A0A1P8BEW2
Sequences
cDNA Sequence
- >AT5G18240.6
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA - >AT5G18240.3
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA - >AT5G18240.2
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA - >AT5G18240.4
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA - >AT5G18240.1
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA - >AT5G18240.5
ATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGCATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGAGCAACTTGAGCTCAGGATAGAGGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAACTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATTTAAATGGTTTCAGCTGGAATTGA
CDS Sequence
Protein Sequence