Gene Details:
- Gene ID: AT5G18110
- Gene Symbol: NCBP, RPX1
- Gene Name: novel cap-binding protein
- Description: Putative cap-binding protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Germplasm Phenotype:
- SALK_131503 — improved resistance to P. xylostella through accumulation of DMNT content.
Function-related keywords:
Literature:
- MELOGEN: an EST database for melon functional genomics. DOI: 10.1186/1471-2164-8-306 ; PMID: 17767721
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Five eIF4E isoforms from Arabidopsis thaliana are characterized by distinct features of cap analogs binding. DOI: 10.1016/j.bbrc.2014.11.032 ; PMID: 25446076
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
Sequences:
cDNA Sequence
- >AT5G18110.1
AGTTCTTTTCTTCTCTCCTCCTCTTTCTTCTTCCTGATTGGAATTTTAGGGCTTTTGAAAGCACGAACGCGTGAAGCTCTAATCGAGAAAAAAATGGAGGTTTTGGATAGGAGAGACGATGAGATCAGGGACTCGGGAAACATGGACAGCATCAAGTCACACTATGTTACCGACTCTGTTTCCGAGGAACGCCGCTCTCGTGAGCTCAAGGATGGAGACCATCCTTTACGGTACAAGTTTTCGATATGGTACACTCGTCGCACACCAGGGGTTCGGAACCAGTCTTATGAAGATAACATCAAGAAGATGGTAGAATTCAGCACGGTTGAAGGATTTTGGGCCTGCTACTGTCACCTTGCTCGTTCTTCTCTCTTGCCTAGTCCAACAGATCTTCATTTCTTTAAGGATGGGATTCGTCCATTGTGGGAGGATGGTGCCAACTGCAATGGAGGAAAGTGGATCATACGTTTCTCAAAAGTTGTATCTGCTCGCTTCTGGGAGGATCTGCTTCTTGCGTTGGTAGGCGACCAGCTTGATGATGCTGATAACATATGTGGGGCAGTACTGAGTGTCCGTTTCAACGAGGACATCATTAGTGTATGGAATCGCAATGCTTCTGACCATCAGGCAGTGATGGGTTTGAGAGACTCAATCAAGCGGCATTTGAAGTTGCCTCATGCATATGTCATGGAATACAAGCCACACGATGCTTCTCTCCGCGACAACTCTTCCTACAGAAACACATGGCTGAGAGGATAGGCCCAAAGTCGATGATTGTATCATGTAATGTGGAGAAGATTTGGGAAGCTCATCTGCAACCTGGGAAGATATCTGGATTGAACCCTGTATCCAATACCATACTGTACCGGAGGCTTACAATATCAGAAAAAACAAAATCCGGGCTACTTCTGTGTCAGTATGTGTTCATTTCGTTTTTCTTTTACAGTACATCTTGTTAACTTCAATGGTTTGACTCTTGATCAAAACTATAAGGATGTATTTTCAATGAAAACTGGAAATTACGTTCTGGTTTACATTATAACTCATGTCTTAAAAAGTAACAGGATGTCAATATACAATGTCACTTCGTACGATGATCTCTAATGTACATCTACTGATG
CDS Sequence
Protein Sequence