Information report for AT5G18100
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization. DOI: 10.1104/pp.118.2.637 ; PMID: 9765550
- A custom microarray analysis of gene expression during programmed cell death in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.2002.01301.x ; PMID: 12028573
- Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana. DOI: 10.1089/152308603321223513 ; PMID: 12626114
- Large-scale identification of leaf senescence-associated genes. DOI: 10.1046/j.1365-313x.2003.01908.x ; PMID: 14617064
- Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis. DOI: 10.1105/tpc.104.022608 ; PMID: 15308753
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis. DOI: 10.1111/j.1365-313X.2006.02665.x ; PMID: 16507087
- Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition. DOI: 10.1111/j.1365-313X.2006.02900.x ; PMID: 17059406
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Long-term effects of mild salt stress on growth, ion accumulation and superoxide dismutase expression of Arabidopsis rosette leaves. DOI: 10.1111/j.1399-3054.2007.01009.x ; PMID: 18275461
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Characterization of Arabidopsis lines deficient in GAPC-1, a cytosolic NAD-dependent glyceraldehyde-3-phosphate dehydrogenase. DOI: 10.1104/pp.108.128769 ; PMID: 18820081
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- Copper chaperone-dependent and -independent activation of three copper-zinc superoxide dismutase homologs localized in different cellular compartments in Arabidopsis. DOI: 10.1104/pp.111.190223 ; PMID: 22186608
- 24-Epibrassinolide promotes arsenic tolerance in Arabidopsis thaliana L. by altering stress responses at biochemical and molecular level. DOI: 10.1016/j.jplph.2019.05.002 ; PMID: 31121523
- Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization. DOI: 10.1104/pp.118.2.637 ; PMID: 9765550
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
Gene Resources
- UniProt: A0A5S9Y7F6
- EMBL: CACSHJ010000096
- AlphaFoldDB: A0A5S9Y7F6
- EnsemblPlants: AT5G18100.1
- Gramene: AT5G18100.1
- KEGG: ath:AT5G18100
- Orthologous matrix: AQRGFHI
- ExpressionAtlas: AT5G18100
- InterPro: IPR001424, IPR018152, IPR024134
- PANTHER: PTHR10003
- SUPFAM: SSF49329
- PROSITE: PS00332
- Gene3D: 2.60.40.200
- OrthoDB: A0A5S9Y7F6
- SWISS-MODEL: A0A5S9Y7F6
- Conserved Domain Database: cd00305
Sequences
cDNA Sequence
- >AT5G18100.2
ATCTTCACATCAATTATTACCAAACACAAAACTGATGGAAGCTCCTAGAGGAAATCTGAGAGCGGTGGCTCTTATCGCCGGCGATAACAACGTCCGAGGCTGTCTTCAATTCGTACAAGACATTTCCGGAACTACTCATGTCACCGGGAAGATCTCAGGACTCTCTCCTGGCTTCCATGGATTTCATATTCACTCTTTTGGTGATACCACAAATGGCTGCATCTCTACTGGACCTCACTTCAATCCATTAAATCGAGTTCACGGGCCACCGAACGAGGAAGAGCGTCATGCTGGCGATTTGGGTAACATTCTTGCAGGATCAAACGGTGTTGCTGAAATCTTAATCAAAGACAAACATATACCGCTTAGTGGGCAGTATTCCATACTCGGGAGGGCGGTTGTTGTGCATGCGGATCCTGATGACCTTGGGAAAGGTACCAAGCATTAGTTCTTAGATTCGTGATGTGCTTTATCGA - >AT5G18100.1
ATCTTCACATCAATTATTACCAAACACAAAACTGATGGAAGCTCCTAGAGGAAATCTGAGAGCGGTGGCTCTTATCGCCGGCGATAACAACGTCCGAGGCTGTCTTCAATTCGTACAAGACATTTCCGGAACTACTCATGTCACCGGGAAGATCTCAGGACTCTCTCCTGGCTTCCATGGATTTCATATTCACTCTTTTGGTGATACCACAAATGGCTGCATCTCTACTGGACCTCACTTCAATCCATTAAATCGAGTTCACGGGCCACCGAACGAGGAAGAGCGTCATGCTGGCGATTTGGGTAACATTCTTGCAGGATCAAACGGTGTTGCTGAAATCTTAATCAAAGACAAACATATACCGCTTAGTGGGCAGTATTCCATACTCGGGAGGGCGGTTGTTGTGCATGCGGATCCTGATGACCTTGGGAAAGGTACCAAGCATTAGTTCTTAGATTCGTGATGTGCTTTATCGA
CDS Sequence
Protein Sequence