Gene Details:

  • Gene ID: AT5G17990
  • Gene Symbol: pat1, TRP1
  • Gene Name: PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1, tryptophan biosynthesis 1
  • Description: tryptophan biosynthesis 1;(source:Araport11)
  • TAIR Accession:
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Germplasm Phenotype:

  • CS6247  — severe tryptophan auxotroph (requires tryptophan); blue fluorescence under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate; very small, yellow green plants, slow growing, bushy inflorescence with numerous lateral branches, abnormal flowers, reduced fertility
  • CS8157  — tryptophan auxotroph; blue fluorescent under long and short wave UV radiation; resistant to 5-methylanthranilate and 6-methylanthranilate; slow growing and stunted plants; bushy inflorescence with numerous lateral branches; abnormal flowers, reduced fertility.
  • CS8158  — tryptophan auxotroph; blue fluorescent under long and short wave UV radiation; resistant to 5-methylanthranilate and 6-methylanthranilate; slow growing and stunted plants; bushy inflorescence with numerous lateral branches; abnormal flowers, reduced fertility, segregating for glabra, gl1 (lacks trichomes on stems and leaves) and segregating for trp1-2.
  • CS8159  — tryptophan auxotroph (requires tryptophan); blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate; slow growing and stunted plants; bushy inflorescence with numerous lateral branches; abnormal flowers, reduced fertility.
  • CS8161  — blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate.
  • CS8162  — trp1-101: blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate; gl1-1: lacks trichomes on stems and leaves.
  • CS8163  — blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate.
  • CS8164  — blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate; yellow seeds, probably due to close linkage to tt4 mutation.
  • CS8165  — weakly blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate; slight cross-resistance to analogs of other amino acids; lacks trichomes on stems and leaves.
  • CS8166  — very weakly blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate.
  • CS8167  — blue fluorescent under long and short wave UV light; resistant to 5-methylanthranilate and 6-methylanthranilate.
  • SALK_142670  — Ovule abortion.

Literature:

Sequences:

cDNA Sequence
  • >AT5G17990.1
    AGTCATTCAGTAATCAACAAATATATTCATATGAAACCCAAAATAAAATAAAATAAACACTTTTCAAGAAAAAAATAAAATACTGAGTACTAAACTGGAAACCCTTTATAAGCAAAAAGACCAAAAGTTAAAAGTTAATTAAGATTTGGTTTAAGGCGCTTTGCTTTATTAGAGAGGAAGGAACGAACCATCATAGAAATCTCTCCTTCGTTCAAGTTTTTCTCTACTGTGTTGGTTGAGCAATCGAGTGATGGTTATTGCGGTGGCGACGACGAGCTCCATTGTTTCCGGAATCAAGCTTTCAGGGATCTTAACTTCGTTCAACGCCGTAGATGATGCGTCCAGTAGTTGCGGAAGAAGCAACTTGACCGGAGTTAGAATTTTTCCGACATTGAGTCGGCGACGATTCTCATCGATCGGAGCTGTTTCCCCAATTCGTGGGGATGCTCAATCTTCCTTTAGTCGCAGCTCTTTCGCTTGCTCTCAGAATCTCGGTTTGAGCGGTGGATTTAGTGCAGCTGAAGCTCTGCCACCTGCTTGTGCAAATGCTAGCCCTTCTTCCATTAAATCTTTCAACCAGTTGATTGAAACCTTGATTGATCGGGTTGATCTATCTGAAACTGAGGCTGAATCATCTCTTGAGTTTTTGCTGAATGAGGCAAACGAGGCGCTGATCAGTGCCTTTCTAGTTCTTCTGAGAGCTAAAGGAGAGACATACGAAGAGATTGTGGGGTTAGCTAGGGCAATGATGAAGCATGCCAGGAAAGTGGAAGGATTAGTTGATGCTGTGGACATAGTTGGAACAGGTGGTGATGGAGCAAACACAGTCAATATATCAACTGGATCTTCAATACTTGCTGCAGCTTGTGGTGCAAAAGTAGCAAAGCAAGGGAATCGTTCAAGTTCTTCTGCTTGTGGAAGTGCTGATGTACTAGAGGCACTAGGAGTGGTTCTGGACTTGGGACCAGAGGGCATTAAAAGATGTGTTGAAGAAGGGGGGATCGGTTTTATGATGTCACCAATGTATCATCCAGCTATGAAGATCGTTGGTCCTGTTCGGAAAAAGCTTAAAATTAAAACTGTTTTTAACATATTGGGACCTATGCTTAATCCTGCTAGAGTTTCTTATGCTGTCGTTGGTGTATACCACAAAGATCTGGTTGTTAAGATGGCAAAGGCACTGCAACGATTTGGAATGAAAAGAGCACTGGTGGTTCATTCATGTGGTCTAGACGAAATGAGTCCGTTAGGAGGAGGACTAGTTTATGATGTAACTCCGGAAAAGATCGAAGAATTCTCATTCGACCCATTGGACTTTGGTATTCCTCGTTGTACTCTTGAGGATTTGCGAGGTGGAGGTCCAGACTACAATGCGGATGTGCTAAGACGTGTGCTTTCAGGGGAAAGTGGAGCAATTGCGGATTCATTGATCCTAAACGCAGCTGCAGCTCTTCTGGTTAGCAACCGAGTTCAAACGCTAGCTGAAGGAGTAACCGTGGCACGTGAAGTACAATCGTCTGGGAAAGCTATCAAGACGCTTGATTCTTGGATAAACATCTCAAACTTAGCTCAGAAATCTCAGTGACCAGAAGAGGCTTATGATATTGTTGTATTCAACGGATCACCTTTGCAAGCAATTGTAGATGAAGATGGAGGCAATGTGCCAAAGGAAGAAGCTGGAGTTATTTGTAACTTAAGTTTTCTTTGTCAAACAATAAAGAGAAGAGACCGGAGCGAGCTCTATACACATTCATCATGTAAACACTACAACAATAATCTTTAATAAAATGAATAAATCTGTTTTACTCAAACGGAGTTCAGATTCATCATTGGGATACAAATCAAACCTAAGTAGTAAGTAGAAAAACAAAATTATAAAATTAGTCCTAACATTGAATCACAGACCATAATCTTGTTCCGAAGTTCTTCACTAATTCTGCAACTACACCTAAAATATCATCATCGTCATGGTGTCTATTCTTTGGAGACTTTCACACGCATCTCTGTCGGTTTGATGAGCTTGAACGTACAAACATCTCCGACCAGTAAACCTAACTCCTTGGCCAAACGACTCCATCCACCAGAGAATCTTGATTGTACATCAG
CDS Sequence
Protein Sequence