Gene Details:
- Gene ID: AT5G17870
- Gene Symbol: cL38, PSRP6
- Gene Name: Ribosomal Protein cL38, plastid-specific 50S ribosomal protein 6
- Description: plastid-specific 50S ribosomal protein 6;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Function-related keywords:
Literature:
- Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 30S ribosomal subunit. DOI: 10.1046/j.1432-1033.2003.03359.x ; PMID: 12605670
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Identification of plant promoter constituents by analysis of local distribution of short sequences. DOI: 10.1186/1471-2164-8-67 ; PMID: 17346352
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The plastid-specific ribosomal proteins of Arabidopsis thaliana can be divided into non-essential proteins and genuine ribosomal proteins. DOI: 10.1111/j.1365-313X.2011.04791.x ; PMID: 21923745
- CHLOROPLAST RIBOSOME ASSOCIATED Supports Translation under Stress and Interacts with the Ribosomal 30S Subunit. DOI: 10.1104/pp.18.00602 ; PMID: 29914890
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT5G17870.2
TTCGATGCCACTAATAATTTAATTTTTGTTCTCTTCTTATCTTATAGATTGTTGCAGCCTGCAGGCTTGCAGCATAACGAGTTACATAACTATATACAAAGGCCCAATAGACACCTCAAAGGCCCAATAAAAAAGCCCAGGAAAAACGAAAACGAAGATATGAAGTTCTTCTCTAATCCGAAGCAAGAGGCTCAAACTCACTTTCACTTGCACAAAGATAAGGAAACCATGTCTGTGTCAGCGATCTTTGGTACCGGAATCGTCACCGTTGCTGCTTCTCCGGTTCTCCGCCAATTTCAAGTTCCAAAATTGGGTAATGGAGGAGGATTAGGGATGGTGATAGAGTGTTCGTCGAGGCCACAGAAGAAATCGACGGCTCATCACAGGAAGACGAGGCCGAAGAAGACTCAGCCTTGGGACATTAAGAGAAAGCCTACTGTTTACGCTCCTCTTCCTCCTCTTCCGGCGGAATGGAGTCCGTTCACTCTCGCTTCTGACGACGGTGGTGCTGCCACTGCTGCGGGAGATTTGGTTTCAGGCGCTGCCTAGTTGGTATGAGTTATCTGCTGATTTGGTTGTAATCTAGTTTGAGAACTTTTGTTGTTGTTTACTGTGTTTTCAGTTTTCTGATGTTTGTTGTTGGGTTTGTTTGTGTTTGATTGGTGAATGAATGGACCAAATTTGCGATTTATAAAGCTTCAACCTTTCTCCTCTGTTTTTGAGTTTAAAGGTCTCAACTTTATAGTTTATAGCTCTCGTCATTGTCATCTATGTTGCTTCTCTATAATTGCTTTTTTCCTTTTGGGTCTCATTAATTTCTGCAAGTAGTAATTGAATTGGGATGACAAGAGTTTAAGTTTGATATGTGAAAATGAA - >AT5G17870.1
TTCGATGCCACTAATAATTTAATTTTTGTTCTCTTCTTATCTTATAGATTGTTGCAGCCTGCAGGCTTGCAGCATAACGAGTTACATAACTATATACAAAGGCCCAATAGACACCTCAAAGGCCCAATAAAAAAGCCCAGGAAAAACGAAAACGAAGATATGAAGTTCTTCTCTAATCCGAAGCAAGAGGCTCAAACTCACTTTCACTTGCACAAAGATAAGGAAACCATGTCTGTGTCAGCGATCTTTGGTACCGGAATCGTCACCGTTGCTGCTTCTCCGGTTCTCCGCCAATTTCAAGTTCCAAAATTGGGTAATGGAGGAGGATTAGGGATGGTGATAGAGTGTTCGTCGAGGCCACAGAAGAAATCGACGGCTCATCACAGGAAGACGAGGCCGAAGAAGACTCAGCCTTGGGACATTAAGAGAAAGCCTACTGTTTACGCTCCTCTTCCTCCTCTTCCGGCGGAATGGAGTCCGTTCACTCTCGCTTCTGACGACGGTGGTGCTGCCACTGCTGCGGGAGATTTGGTTTCAGGCGCTGCCTAGTTGGTATGAGTTATCTGCTGATTTGGTTGTAATCTAGTTTGAGAACTTTTGTTGTTGTTTACTGTGTTTTCAGTTTTCTGATGTTTGTTGTTGGGTTTGTTTGTGTTTGATTGGTGAATGAATGGACCAAATTTGCGATTTATAAAGCTTCAACCTTTCTCCTCTGTTTTTGAGTTTAAAGGTCTCAACTTTATAGTTTATAGCTCTCGTCATTGTCATCTATGTTGCTTCTCTATAATTGCTTTTTTCCTTTTGGGTCTCATTAATTTCTGCAAGTAGTAATTGAATTGGGATGACAAGAGTTTAAGTTTGATATGTGAAAATGAA
CDS Sequence
Protein Sequence