Information report for AT5G17820
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- ohy1 — Increased peroxidase activity leading tin increased resistance to pathogens, induction of defense response gene expression and increased leaf cuticle permeability.
Functional Keywords
Literature and News
- Structural diversity and transcription of class III peroxidases from Arabidopsis thaliana. DOI: 10.1046/j.1432-1033.2002.03311.x ; PMID: 12473102
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Expression analysis of the Arabidopsis peroxidase multigenic family. DOI: 10.1016/j.phytochem.2004.04.017 ; PMID: 15231406
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- Transcriptional responses of Arabidopsis thaliana plants to As (V) stress. DOI: 10.1186/1471-2229-8-87 ; PMID: 18684332
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
- UniProt: A0A1P8BGP6
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BGP6
- EnsemblPlants: AT5G17820.2
- Gramene: AT5G17820.2
- ExpressionAtlas: AT5G17820
- InterPro: IPR000823, IPR002016, IPR010255
- PANTHER: PTHR31517, PTHR31517:SF59
- SUPFAM: SSF48113
- PROSITE: PS00435, PS00436, PS50873
- Gene3D: 1.10.420.10, 1.10.520.10
- OrthoDB: A0A1P8BGP6
- SWISS-MODEL: A0A1P8BGP6
- Conserved Domain Database: cd00693
Sequences
cDNA Sequence
- >AT5G17820.2
ATGTATATGAGGTGTATTAATCTTTTAGGCTCTAAATTATATTTCGAAGGTTGGCTTTATATATATATATATACCTTATGGTTGATCTTAAATGACTCACAACCCTTTCCACAAGAAGTTATAAACCAATACATAGAAGAAAACTTCCAACCCCAAAAAATGATGAAGGGTGCCAAGTTTTCATCTCTTCTTGTGCTTTTCTTTATTTTTCCGATCGCATTTGCTCAACTGAGAGTCGGGTTTTATAGTCAATCATGCCCTCAAGCCGAGACTATCGTACGCAATCTGGTGCGCCAACGGTTTGGTGTTACCCCAACCGTTACCGCCGCTTTGCTCCGTATGCATTTCCACGACTGTTTCGTTAAGGGCTGTGACGCTTCTCTCCTCATTGATTCAACCAATTCCGAGAAAACTGCTGGACCAAACGGAAGCGTCAGGGAATTTGACCTGATAGACCGGATCAAGGCTCAGCTAGAAGCTGCATGCCCTTCCACAGTCTCATGTGCTGACATCGTCACATTGGCCACACGTGACTCGGTGGCCTTAGCCGGAGGCCCAAGCTACAGCATCCCCACGGGAAGGCGTGACGGTAGGGTCTCAAACAATCTTGATGTAACCTTACCGGGTCCAACGATCTCCGTCTCTGGAGCCGTGAGTTTATTCACGAACAAAGGGATGAACACGTTCGATGCAGTAGCTCTTTTGGGTGCACACACTGTTGGTCAAGGAAATTGTGGTCTCTTTAGTGACAGAATCACTAGCTTCCAAGGAACTGGACGACCGGACCCGTCCATGGACCCCGCTTTGGTTACCAGCCTAAGGAACACATGCAGAAATAGCGCGACGGCGGCACTAGACCAGTCGAGTCCATTGAGATTCGACAACCAGTTCTTCAAGCAAATCCGTAAAAGGAGAGGAGTGTTGCAAGTTGACCAACGCCTCGCATCCGACCCACAGACTCGTGGGATTGTGGCTCGGTATGCTAATAACAACGCCTTCTTCAAGCGTCAGTTCGTTAGAGCAATGGTGAAGATGGGAGCAGTTGATGTGCTTACTGGTCGTAACGGTGAGATCAGAAGGAACTGCAGGAGATTCAACTAATGAACTACAGAAGCGTGGATATAATATTACATTTGATACAATATATTTCAAATCTTCTTTATATTTTTACTAATTCATTTTTGGTTTTGGTTGGGGTTTTCTTGCATAAATAAGGCTTTTCTTAAATTGGATGGTTTCGATTTTCGAGAAAGATTACTATATATTATATTGTTGGTCTGCATTTGGTGGATGTATCTTAAGTTTACAAATAATTTGTGATATTGAAATATTGATATGTATCTTTATCATGGTTAATCATATATATATATATATGAATATTGTTTTTCAT - >AT5G17820.1
ATGTATATGAGGTGTATTAATCTTTTAGGCTCTAAATTATATTTCGAAGGTTGGCTTTATATATATATATATACCTTATGGTTGATCTTAAATGACTCACAACCCTTTCCACAAGAAGTTATAAACCAATACATAGAAGAAAACTTCCAACCCCAAAAAATGATGAAGGGTGCCAAGTTTTCATCTCTTCTTGTGCTTTTCTTTATTTTTCCGATCGCATTTGCTCAACTGAGAGTCGGGTTTTATAGTCAATCATGCCCTCAAGCCGAGACTATCGTACGCAATCTGGTGCGCCAACGGTTTGGTGTTACCCCAACCGTTACCGCCGCTTTGCTCCGTATGCATTTCCACGACTGTTTCGTTAAGGGCTGTGACGCTTCTCTCCTCATTGATTCAACCAATTCCGAGAAAACTGCTGGACCAAACGGAAGCGTCAGGGAATTTGACCTGATAGACCGGATCAAGGCTCAGCTAGAAGCTGCATGCCCTTCCACAGTCTCATGTGCTGACATCGTCACATTGGCCACACGTGACTCGGTGGCCTTAGCCGGAGGCCCAAGCTACAGCATCCCCACGGGAAGGCGTGACGGTAGGGTCTCAAACAATCTTGATGTAACCTTACCGGGTCCAACGATCTCCGTCTCTGGAGCCGTGAGTTTATTCACGAACAAAGGGATGAACACGTTCGATGCAGTAGCTCTTTTGGGTGCACACACTGTTGGTCAAGGAAATTGTGGTCTCTTTAGTGACAGAATCACTAGCTTCCAAGGAACTGGACGACCGGACCCGTCCATGGACCCCGCTTTGGTTACCAGCCTAAGGAACACATGCAGAAATAGCGCGACGGCGGCACTAGACCAGTCGAGTCCATTGAGATTCGACAACCAGTTCTTCAAGCAAATCCGTAAAAGGAGAGGAGTGTTGCAAGTTGACCAACGCCTCGCATCCGACCCACAGACTCGTGGGATTGTGGCTCGGTATGCTAATAACAACGCCTTCTTCAAGCGTCAGTTCGTTAGAGCAATGGTGAAGATGGGAGCAGTTGATGTGCTTACTGGTCGTAACGGTGAGATCAGAAGGAACTGCAGGAGATTCAACTAATGAACTACAGAAGCGTGGATATAATATTACATTTGATACAATATATTTCAAATCTTCTTTATATTTTTACTAATTCATTTTTGGTTTTGGTTGGGGTTTTCTTGCATAAATAAGGCTTTTCTTAAATTGGATGGTTTCGATTTTCGAGAAAGATTACTATATATTATATTGTTGGTCTGCATTTGGTGGATGTATCTTAAGTTTACAAATAATTTGTGATATTGAAATATTGATATGTATCTTTATCATGGTTAATCATATATATATATATATGAATATTGTTTTTCAT
CDS Sequence
Protein Sequence