Information report for AT5G17790
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- oz1-1 — Uniform yellow phenotype as a young seedling. Subsequent growth on sucrose media result in the appearance of light green, non-variegated leaves. Mutants display altered editing of various chloroplast cytidine targets in RNA.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Arabidopsis VARIEGATED 3 encodes a chloroplast-targeted, zinc-finger protein required for chloroplast and palisade cell development. DOI: 10.1242/jcs.01360 ; PMID: 15340011
- Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. DOI: 10.1104/pp.105.076083 ; PMID: 16461379
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- A zinc finger motif-containing protein is essential for chloroplast RNA editing. DOI: 10.1371/journal.pgen.1005028 ; PMID: 25768119
- Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2. DOI: 10.1111/tpj.14384 ; PMID: 31077462
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- A RanBP2-type zinc finger protein functions in intron splicing in Arabidopsis mitochondria and is involved in the biogenesis of respiratory complex I. DOI: 10.1093/nar/gkab066 ; PMID: 33660772
- The RanBP2 zinc finger domains of chloroplast RNA editing factor OZ1 are required for protein-protein interactions and conversion of C to U. DOI: 10.1111/tpj.15569 ; PMID: 34743362
Gene Resources
Sequences
cDNA Sequence
- >AT5G17790.1
TTTTTTCTTCATTTTGCAATTATTTTGCGATTTATTAATCCTTTTTTTTTCCTTAAACATCACTGAAATAATTCTCGCCGGTAAAAATAAAACCAGTGACGACGAGCAACGATGAACAACTCCACCAGACTCATCTCCCTCTTCTCTCCTCATCCTCCTCCTCTCTTTCTACTCCGTGGTCTCTACATCAGCCGCATAGCCAATCTCCGCCGTTTCCACCGCCGTGCGTTTCCTCCTTCGTCCGTTGCCTCAACCAATCTATGTTCTTTCCGTCCACTCGTGTCATTGCCGCCGCTTATCCCCACGTTTCCTATAGGACGATTCTACAATCACCAAGTCCGTGTCTCCGCCGCAGATTTTGTTCCTTCTTATCACAACCAGCAGCTACCTGAATGGACAGAGCTACTCCAATCTCTCTCCAAAGCTGGTTACTTCTCAGATTCCGGTTCGATTTCTGGTTTAGAAAGTGAATTCTTTCCCGGTTTTCCTGATGAACTTCTCCGTCCAGCTCTTGCTTGCTTAGCTCTAGCTCGTGAACGACCAGAACTGCTTGAAATGCTTTCGAGGAGAGACGTTGAAGTGCTGGTGGAGAATGGAAAGCCATTTTTATTCAAGACAGGTCCAGATTCACTTAAAAGGATGAGCCTTTACCTAAGAAGTGGTCTTCAGGGCATTGGTAAGTTGATGGATATGGAGAAGGCGAGTACAGTTGATTTGATGAGGCTTATTTTGAGTTATGTTGTGGATGTTGCTTCTTCTGAGGAGAGCAAACAACATAACAAAGAGATTATGGAGTCATCGGTTCGAAGCCTCTTGAGTCAGATAGCGAAGATGAGCTTGCGTCCTCCTGAGTCGAATGTTCATGACACGATGCAAAATCAGTACTCAGATAGAGATGGACAAGGAGTCAGGTCTTTTCAGAATAACGTTGAGATGAAACGTGGTGACTGGATTTGCTCGAGGTGCAGTGGCATGAACTTTGCGAGAAATGTCAAATGCTTCCAGTGTGATGAAGCAAGACCAAAGAGACAGCTTACTGGTAGTGAATGGGAGTGTCCTCAATGTGATTTCTATAATTACGGGAGGAATGTAGCTTGCTTAAGATGTGACTGCAAGCGACCCAGGGACTCTTCACTCAATTCAGCCAACTCTGATTATTCAAGTGACCCTGAACTTGAGAGAAGACTGGTCGAAAACGAAAAGAAAGCACAGAGGTGGCTTAGTAAAGTAGCACAGGGTGGTTCTGATGCGAACAGTGTTGATACAGATGAAGATTTCCCAGAGATTATGCCTTTGAGGAAAGGAGTGAATAGATATGTTGTTAGCACGAGGAAGCCACCTCTTGAGAGAAGGTTGGCTAATACTGAGAACAGAGTAGCTACAGATGGAAACTCGAAAAGGAGCGACGATAATGCTTTGGGAAGTAAAACAACTAGGAGCTTGAATGAGATTCTTGGTTCTTCATCCTCTTTGACTTCTCGTTCTGATGACAAGAATGTATCTTCCAGAAGGTTTGAATCTTCTCAGGGAATAAACACCGATTTTGTTCCTTTCGTGCCATTACCTTCGGATATGTTTGCCAAGAAACCTAAGGAGGAAACACAGATAGGTCTGATTGACAACATCCAAGTGGATGGTTTCTCAGGCGGCAATCAAAATGTCTATCAAGAGGACAAGTCAGATGCAAATCACTCTGGCAAAGAAACAGATCGCCTTGAAAAGGAAGATCACAAATCAGAGGAACCTGCGAGGTGGTTCAAACGGGTCACCGAACTGCACAATGTTTCAGACTTGGAAAGCGCAATACCGCAAGAGATTTCTCCTGAGAAAATGCCTATGCGAAAAGGAGAGAATCGGTTTGTAGTGAGTAGGAAGAAAGACCGTTCACTGACTTCTCCAGCATACAAGAGGCCAGAAGATTCAGACTTTGTCCCCTTTGTCCCTTTCCCACCTGACTACTTCGCCAAAGAGAAACAACCCAAGGAATCAATAGATACTCTTCCAGCTCCGGCGACAGAAAACGTTTCTCAGGTAGTACAACAAGAACCAAGAGAACCTTCAATCAACAAATCTGATACAGTGGCAGTGAAGATCAGAAATGGAAAGAGCTTGGAGGGTTCGTTAGTGAAGGAGTCAGACTTGTTGGACATGTCAGAGGAAGCAAAAGCAGAGAGATGGTTTAAGAGAGTGGCTGAGATTAAGAACATATCAGAGCTGAGTGAGATCCCAGACGAAGATTTCCCGTCGATAATGCCGATGAGGAAAGGAGTGAATAGGTTTGTTGTCAGCAAGAGGAAAACTCCCTTGGAACGGCGTTTAACTTCTCAACGACACCAGAGAAATCCTCATATCACCAACTCTGATCCCACTGGTAAAGGAGATAAATGACCATGTAGCATAACATTTTTTCGGAGTAATATTACCATACGATTTTTGTATTTCTTTAATTCAACTTCTATATACACAATGTGTAGAAACTTTATTCTCCATCTTTACCGACGG
CDS Sequence
Protein Sequence