Information report for AT5G17710
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009570 — located in — chloroplast stroma
- GO:0006457 — acts upstream of or within — protein folding
- GO:0005515 — enables — protein binding
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0050821 — acts upstream of or within — protein stabilization
- GO:0009579 — located in — thylakoid
- GO:0051087 — enables — protein-folding chaperone binding
- GO:0009536 — located in — plastid
- GO:0042803 — enables — protein homodimerization activity
- GO:0051082 — enables — unfolded protein binding
- GO:0009507 — is active in — chloroplast
- CS24098 — Decreased chlorophyll b content.
- CS24098 — embryo defective; preglobular
- cge1-1 — Heterozygous plants segregate 25% for aborted seed. Embryo lethal.Globular stage arrest.
- cge1-2 — Heterozygous plants segregate 25% for aborted seed. Embryo lethal.Globular stage arrest.
- cge1-3 — Growth retardation phenotype. Lower fresh weight.
Functional Keywords
Literature and News
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Functional analysis of the Chloroplast GrpE (CGE) proteins from Arabidopsis thaliana. DOI: 10.1016/j.plaphy.2019.03.027 ; PMID: 30927692
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Two Arabidopsis Chloroplast GrpE Homologues Exhibit Distinct Biological and Hetero-Oligomers. DOI: 10.3389/fpls.2019.01719 ; PMID: 32038688
- Presequence translocase-associated motor subunits of the mitochondrial protein import apparatus are dual-targeted to mitochondria and plastids. DOI: 10.3389/fpls.2022.981552 ; PMID: 36438081
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: Q94K56
- EMBL: AF370286, AY063054, CP002688
- AlphaFoldDB: Q94K56
- EnsemblPlants: AT5G17710.1, AT5G17710.3
- Gramene: AT5G17710.1, AT5G17710.3
- KEGG: ath:AT5G17710
- Orthologous matrix: HEVMMQV
- ExpressionAtlas: AT5G17710
- InterPro: IPR000740, IPR009012, IPR013805
- PANTHER: PTHR21237, PTHR21237:SF27
- SUPFAM: SSF51064, SSF58014
- PROSITE: PS01071
- Gene3D: 2.30.22.10, 3.90.20.20
- SWISS-MODEL: Q94K56
- Conserved Domain Database: cd00446
Sequences
cDNA Sequence
- >AT5G17710.1
ATCTTCCTTATCTCTCTCCGCCACTCTCCTTCTCTTTCTCCGAACTCTTCGATGGCCGGTCTACTCAAAACGCCGTCTTTACATCTCACACCAACTCTTCTTCATGCTCCTTCTGTACCCTTTAAGCCCTTTTGCGTATCTTTCGCCGGAGGAAGAAACGTTAGCGTCTCACTCTCTCGCCGAGCTTCTCTCCGGTCTGTCTCTAGCGGCTATCCTCTCCGCTTACTAAACCTCGTACCCTTTGCTTCGGGAGAAGCTGAGACGACGGAGACGGAGGTGGAATCGAACGAACCCGAAGAGACGGATGGTGCTGTTGATGTCGAGAATGAAAATGCCAGTGCTGAGGAGGGTGAAGCTGAGGAAGAAGAAGCAGCTGTTATCACAGCGTTGCTGAAATCCTATAAAGAAGCTTTAGCAGACAACAACGAGGGGAAGATTGCTGAGATAGAAGCATCTTTAAAGTCCATAGAAGATGAAAAATTTCTGCTTGCGGATAAAGTAGCGTCTTTATCCAATGAGTTATCGGTGGAGAGGGATCGGCTTATAAGAATCAGTGCAGATTTCGACAACTTCAGGAAGAGGACTGAGAGGGAAAGGCTAAACCTTGTTTCAAATGCTCAAGGAGAGGTTGTAGAGAATCTTTTGGCTGTTTTGGATAATTTCGAGAGAGCTAAATCCCAAATTAAGGTGGAGACTGAGGGAGAAGAGAAAGTCACTAATAGCTATCAGAGCATATACAAACAGTTTGTAGAAATTCTGGGATCACTTGGTGTTATCCATGTGGAGACAGTCGGCAAGCAGTTTGATCCAATGCTACATGAGGCAATAATGAGAGAAGACTCTGCGGAATACGAAGAGGGTATAGTACTAGAAGAATACAGGAAAGGTTTCTTGCTAGGTGAAAGGCTTTTACGTCCTTCAATGGTGAAAGTATCAGCTGGACCTGGACCAGAAAAGCCCCTTGAAGCTGAAGGAGAAGAAGCCACAGCACAAGGAAGCGCAGAAGAAGAATCATCTTCATCTTGAAATTGAAGATGATCAAGACTCAGCAGTTTTGTGTGCGTGTGTGTGAGAGAGATACAGAGATAAAAGAGGGAGAGCTAGAAAATTCGGAAGATTCAGAGAAAATGTTGATAATTGGAAGTTTGGAACAAACAGAAAGTCAATACAGTAAATTGTATTTGAGTACTATGGCCTACGAGTCCAAATTATTGTCCAAGTTTTCTTCTTTTGGTTAGGGTTCTTTGGGTACTTAAATATCTTAAAG - >AT5G17710.2
ATCTTCCTTATCTCTCTCCGCCACTCTCCTTCTCTTTCTCCGAACTCTTCGATGGCCGGTCTACTCAAAACGCCGTCTTTACATCTCACACCAACTCTTCTTCATGCTCCTTCTGTACCCTTTAAGCCCTTTTGCGTATCTTTCGCCGGAGGAAGAAACGTTAGCGTCTCACTCTCTCGCCGAGCTTCTCTCCGGTCTGTCTCTAGCGGCTATCCTCTCCGCTTACTAAACCTCGTACCCTTTGCTTCGGGAGAAGCTGAGACGACGGAGACGGAGGTGGAATCGAACGAACCCGAAGAGACGGATGGTGCTGTTGATGTCGAGAATGAAAATGCCAGTGCTGAGGAGGGTGAAGCTGAGGAAGAAGAAGCAGCTGTTATCACAGCGTTGCTGAAATCCTATAAAGAAGCTTTAGCAGACAACAACGAGGGGAAGATTGCTGAGATAGAAGCATCTTTAAAGTCCATAGAAGATGAAAAATTTCTGCTTGCGGATAAAGTAGCGTCTTTATCCAATGAGTTATCGGTGGAGAGGGATCGGCTTATAAGAATCAGTGCAGATTTCGACAACTTCAGGAAGAGGACTGAGAGGGAAAGGCTAAACCTTGTTTCAAATGCTCAAGGAGAGGTTGTAGAGAATCTTTTGGCTGTTTTGGATAATTTCGAGAGAGCTAAATCCCAAATTAAGGTGGAGACTGAGGGAGAAGAGAAAGTCACTAATAGCTATCAGAGCATATACAAACAGTTTGTAGAAATTCTGGGATCACTTGGTGTTATCCATGTGGAGACAGTCGGCAAGCAGTTTGATCCAATGCTACATGAGGCAATAATGAGAGAAGACTCTGCGGAATACGAAGAGGGTATAGTACTAGAAGAATACAGGAAAGGTTTCTTGCTAGGTGAAAGGCTTTTACGTCCTTCAATGGTGAAAGTATCAGCTGGACCTGGACCAGAAAAGCCCCTTGAAGCTGAAGGAGAAGAAGCCACAGCACAAGGAAGCGCAGAAGAAGAATCATCTTCATCTTGAAATTGAAGATGATCAAGACTCAGCAGTTTTGTGTGCGTGTGTGTGAGAGAGATACAGAGATAAAAGAGGGAGAGCTAGAAAATTCGGAAGATTCAGAGAAAATGTTGATAATTGGAAGTTTGGAACAAACAGAAAGTCAATACAGTAAATTGTATTTGAGTACTATGGCCTACGAGTCCAAATTATTGTCCAAGTTTTCTTCTTTTGGTTAGGGTTCTTTGGGTACTTAAATATCTTAAAG - >AT5G17710.3
ATCTTCCTTATCTCTCTCCGCCACTCTCCTTCTCTTTCTCCGAACTCTTCGATGGCCGGTCTACTCAAAACGCCGTCTTTACATCTCACACCAACTCTTCTTCATGCTCCTTCTGTACCCTTTAAGCCCTTTTGCGTATCTTTCGCCGGAGGAAGAAACGTTAGCGTCTCACTCTCTCGCCGAGCTTCTCTCCGGTCTGTCTCTAGCGGCTATCCTCTCCGCTTACTAAACCTCGTACCCTTTGCTTCGGGAGAAGCTGAGACGACGGAGACGGAGGTGGAATCGAACGAACCCGAAGAGACGGATGGTGCTGTTGATGTCGAGAATGAAAATGCCAGTGCTGAGGAGGGTGAAGCTGAGGAAGAAGAAGCAGCTGTTATCACAGCGTTGCTGAAATCCTATAAAGAAGCTTTAGCAGACAACAACGAGGGGAAGATTGCTGAGATAGAAGCATCTTTAAAGTCCATAGAAGATGAAAAATTTCTGCTTGCGGATAAAGTAGCGTCTTTATCCAATGAGTTATCGGTGGAGAGGGATCGGCTTATAAGAATCAGTGCAGATTTCGACAACTTCAGGAAGAGGACTGAGAGGGAAAGGCTAAACCTTGTTTCAAATGCTCAAGGAGAGGTTGTAGAGAATCTTTTGGCTGTTTTGGATAATTTCGAGAGAGCTAAATCCCAAATTAAGGTGGAGACTGAGGGAGAAGAGAAAGTCACTAATAGCTATCAGAGCATATACAAACAGTTTGTAGAAATTCTGGGATCACTTGGTGTTATCCATGTGGAGACAGTCGGCAAGCAGTTTGATCCAATGCTACATGAGGCAATAATGAGAGAAGACTCTGCGGAATACGAAGAGGGTATAGTACTAGAAGAATACAGGAAAGGTTTCTTGCTAGGTGAAAGGCTTTTACGTCCTTCAATGGTGAAAGTATCAGCTGGACCTGGACCAGAAAAGCCCCTTGAAGCTGAAGGAGAAGAAGCCACAGCACAAGGAAGCGCAGAAGAAGAATCATCTTCATCTTGAAATTGAAGATGATCAAGACTCAGCAGTTTTGTGTGCGTGTGTGTGAGAGAGATACAGAGATAAAAGAGGGAGAGCTAGAAAATTCGGAAGATTCAGAGAAAATGTTGATAATTGGAAGTTTGGAACAAACAGAAAGTCAATACAGTAAATTGTATTTGAGTACTATGGCCTACGAGTCCAAATTATTGTCCAAGTTTTCTTCTTTTGGTTAGGGTTCTTTGGGTACTTAAATATCTTAAAG
CDS Sequence
Protein Sequence