Information report for AT5G17330
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0004351 — enables — glutamate decarboxylase activity
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0010035 — acts upstream of or within — response to inorganic substance
- GO:0009617 — acts upstream of or within — response to bacterium
- GO:0006538 — involved in — glutamate catabolic process
- GO:0030170 — enables — pyridoxal phosphate binding
- GO:0005829 — is active in — cytosol
- GO:1901362 — acts upstream of or within — organic cyclic compound biosynthetic process
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0019438 — acts upstream of or within — aromatic compound biosynthetic process
- GO:0014070 — acts upstream of or within — response to organic cyclic compound
- GO:0043170 — acts upstream of or within — macromolecule metabolic process
- GO:0005516 — enables — calmodulin binding
- GO:0090558 — acts upstream of or within — plant epidermis development
- GO:0010015 — acts upstream of or within — root morphogenesis
- GO:0044550 — acts upstream of or within — secondary metabolite biosynthetic process
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0071554 — acts upstream of or within — cell wall organization or biogenesis
- CS860068 — No visible phenotype.
- CS860069 — No visible phenotype.
- CS860070 — No visible phenotype.
- SALK_070359 — Mutant plants showed alterations in the cuticular wax profiles and embryo development. Similar to rst1-1.
Functional Keywords
Literature and News
- Characterization of two glutamate decarboxylase cDNA clones from Arabidopsis. DOI: 10.1104/pp.117.4.1411 ; PMID: 9701597
- Two isoforms of glutamate decarboxylase in Arabidopsis are regulated by calcium/calmodulin and differ in organ distribution. DOI: 10.1023/a:1006047623263 ; PMID: 9700069
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- A high-throughput Arabidopsis reverse genetics system. DOI: 10.1105/tpc.004630 ; PMID: 12468722
- Generation of Arabidopsis protein chips for antibody and serum screening. DOI: 10.1023/a:1025424814739 ; PMID: 14558660
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Transcript profiling in the chl1-5 mutant of Arabidopsis reveals a role of the nitrate transporter NRT1.1 in the regulation of another nitrate transporter, NRT2.1. DOI: 10.1105/tpc.104.024380 ; PMID: 15319483
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. DOI: 10.1104/pp.105.067314 ; PMID: 16299181
- Dynamics of Arabidopsis thaliana soluble proteome in response to different nutrient culture conditions. DOI: 10.1002/elps.200500561 ; PMID: 16358359
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Contribution of the GABA shunt to hypoxia-induced alanine accumulation in roots of Arabidopsis thaliana. DOI: 10.1093/pcp/pcm171 ; PMID: 18077464
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Mutants of GABA transaminase (POP2) suppress the severe phenotype of succinic semialdehyde dehydrogenase (ssadh) mutants in Arabidopsis. DOI: 10.1371/journal.pone.0003383 ; PMID: 18846220
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Insect Herbivory-Elicited GABA Accumulation in Plants is a Wound-Induced, Direct, Systemic, and Jasmonate-Independent Defense Response. DOI: 10.3389/fpls.2015.01128 ; PMID: 26734035
- Gamma-aminobutyric acid depletion affects stomata closure and drought tolerance of Arabidopsis thaliana. DOI: 10.1016/j.plantsci.2016.01.005 ; PMID: 26940489
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Induction of γ-aminobutyric acid plays a positive role to Arabidopsis resistance against Pseudomonas syringae. DOI: 10.1111/jipb.12974 ; PMID: 32458527
- γ-Aminobutyric acid plays a key role in plant acclimation to a combination of high light and heat stress. DOI: 10.1093/plphys/kiac010 ; PMID: 35078231
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
Gene Resources
- UniProt: A0A5S9Y4Y1
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A5S9Y4Y1
- EnsemblPlants: AT5G17330.1
- Gramene: AT5G17330.1
- KEGG: ath:AT5G17330
- Orthologous matrix: PCTETRY
- ExpressionAtlas: AT5G17330
- InterPro: IPR002129, IPR010107, IPR015421
- PANTHER: PTHR43321, PTHR43321:SF34
- SUPFAM: SSF53383
- Gene3D: 3.40.640.10, 3.90.1150.160, 4.10.280.50
- OrthoDB: A0A5S9Y4Y1
- SWISS-MODEL: A0A5S9Y4Y1
- Conserved Domain Database: cd06450
Sequences
cDNA Sequence
- >AT5G17330.1
CTCTAATTCAAACAAAGTTTAGGGCTTGGGAAGAAATATTCACAAAAAGGAAGTTTCCGAAAATTCTTTTATATTATTCCCCAAGCAAACCATTCAATATCATTGATTATTGATATAAAACCCATATAAAGGTGTCTCTCATCATCCTCCATTCCCATACATCACTTTCCTCGATCTCACTTTCTCTCTCTTATCATCATCTCCTGGTATTCTCTCTCTCTCATCTCCGTGATGGTGCTCTCCCACGCCGTATCGGAGTCGGACGTCTCCGTCCACTCCACATTCGCATCACGTTACGTCCGTACTTCACTTCCTAGGTTCAAGATGCCGGAAAACTCGATTCCTAAGGAAGCGGCGTATCAGATCATCAACGACGAGCTGATGCTTGACGGGAATCCACGGTTGAACTTAGCCTCCTTTGTGACGACATGGATGGAGCCTGAGTGTGATAAACTCATCATGTCCTCCATCAACAAGAACTATGTTGACATGGACGAGTACCCCGTCACCACCGAACTTCAGAACCGATGTGTGAACATGATTGCACATCTATTCAATGCACCGTTAGAAGAGGCGGAGACCGCCGTCGGAGTAGGAACCGTTGGATCATCGGAGGCCATAATGTTGGCCGGTTTGGCCTTCAAGCGTAAATGGCAGAACAAGCGCAAAGCTGAAGGCAAACCCGTCGATAAACCCAACATTGTCACCGGAGCCAATGTTCAAGTGTGTTGGGAGAAATTCGCTAGGTACTTTGAGGTTGAACTTAAGGAAGTGAAATTGAGTGAAGGATACTATGTGATGGACCCTCAACAAGCTGTTGATATGGTTGATGAGAACACCATTTGTGTTGCGGCCATTCTTGGTTCCACTCTTAATGGAGAATTCGAAGATGTTAAACTCTTGAACGATCTCTTGGTCGAAAAGAACAAAGAAACCGGATGGGATACACCAATCCACGTGGATGCGGCAAGTGGAGGATTCATTGCACCGTTTTTGTATCCGGAATTGGAATGGGACTTTAGACTTCCCTTGGTGAAGAGTATCAATGTGAGTGGTCACAAGTATGGACTTGTGTACGCAGGGATTGGTTGGGTGATCTGGAGAAACAAAGAGGATTTGCCTGAGGAACTCATCTTCCATATCAATTATCTTGGTGCTGACCAACCCACCTTTACTCTCAATTTCTCCAAAGGTTCAAGTCAAGTCATTGCTCAATACTACCAACTTATCCGATTGGGCCACGAGGGTTACAGAAATGTGATGGAGAATTGCAGAGAGAATATGATCGTCCTAAGGGAAGGACTTGAGAAGACAGAAAGGTTCAACATCGTCTCAAAGGACGAGGGAGTGCCACTTGTCGCTTTCTCCTTGAAAGATAGCAGCTGTCACACTGAGTTCGAAATCTCCGACATGCTTCGCAGGTATGGATGGATAGTGCCGGCCTACACAATGCCTCCAAATGCACAACACATCACTGTTCTTCGTGTGGTTATCAGAGAAGATTTCTCGAGAACACTCGCTGAGAGACTTGTGATCGATATAGAGAAAGTGATGCGTGAGCTCGATGAGCTTCCTTCGAGAGTGATTCACAAAATATCACTTGGACAAGAGAAGAGTGAATCTAACAGCGATAACTTGATGGTCACGGTGAAGAAGAGCGATATCGACAAGCAGAGAGATATCATCACTGGCTGGAAGAAGTTTGTCGCCGACAGGAAGAAGACGAGTGGTATCTGCTAATCGAAATATATTTACTTCAAATGTTTGAAGACTTTTATTAATAATGCATAATTGCATTGATTTGGATATTTGAATGTTTCATTCCCCTTTATCGCTGAACCAAGTTTCATTTCCCTTTATTGCTGAAGTAAGTTTCATTTCCCTTTATTACTGAACCAAGTTTCATTTGACTTTGATTTGTAATATCTTTTGATATTATTATTATTGCCGTATTTTTAAATACGTTTATCTGTTTT
CDS Sequence
Protein Sequence