Information report for AT5G17320
Gene Details
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Functional Descriptions
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009071 — anther wall tapetum — pollen sac tapetum (exact), portion of anther wall tapetal tissue (exact), tapete (Spanish, exact), 葯壁タペート組織 (Japanese, exact), Poaceae tapetum (narrow), Zea tapetum (narrow)
- PO:0025074 — embryo sac — saco embrionario (Spanish, exact), 胚嚢 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0008289 — enables — lipid binding
- GO:0005634 — located in — nucleus
- hdg8-1 hdg9-1 — No visible phenotype.
- hdg9-1 — No visible phenotype.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- START lipid/sterol-binding domains are amplified in plants and are predominantly associated with homeodomain transcription factors. DOI: 10.1186/gb-2004-5-6-r41 ; PMID: 15186492
- Characterization of the class IV homeodomain-Leucine Zipper gene family in Arabidopsis. DOI: 10.1104/pp.106.077388 ; PMID: 16778018
- A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis. DOI: 10.1016/j.gene.2012.07.003 ; PMID: 22796129
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A654G1Z4
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G1Z4
- EnsemblPlants: AT5G17320.1
- Gramene: AT5G17320.1
- KEGG: ath:AT5G17320
- Orthologous matrix: EREQYTH
- ExpressionAtlas: AT5G17320
- InterPro: IPR001356, IPR002913, IPR009057
- PANTHER: PTHR45654, PTHR45654:SF9
- SUPFAM: SSF46689, SSF55961
- PROSITE: PS50071, PS50848
- Gene3D: 1.10.10.60, 3.30.530.20
- SWISS-MODEL: A0A654G1Z4
- Conserved Domain Database: cd00086, cd08875
Sequences
cDNA Sequence
- >AT5G17320.1
ATGGATTTTACTCGCGATGACAACTCAAGTGATGAACGGGAAAATGATGTAGACGCCAACACCAACAACCGTCACGAGAAGAAGGGTTACCATCGCCACACTAATGAACAAATTCATAGGCTTGAAACGTATTTCAAGGAATGTCCTCATCCAGACGAATTTCAGCGACGTCTGTTGGGTGAAGAACTGAATCTGAAACCAAAACAAATCAAATTTTGGTTTCAAAACAAAAGAACTCAAGCTAAGAGTCACAATGAAAAAGCAGACAATGCAGCGCTTAGGGCAGAAAATATTAAGATTAGACGTGAGAACGAATCAATGGAAGATGCACTGAATAATGTGGTTTGCCCTCCATGTGGTGGTCGTGGTCCTGGGAGAGAAGACCAACTTCGACATCTCCAAAAACTCCGTGCACAAAACGCTTATCTCAAAGATGAGTATGAAAGAGTCTCAAACTACCTAAAACAGTACGGAGGTCACTCAATGCATAACGTCGAGGCCACACCCTATCTCCATGGTCCATCAAACCATGCATCAACGTCCAAGAACCGTCCAGCATTGTACGGAACCTCTTCTAACCGTCTCCCCGAGCCTTCAAGCATATTTAGAGGACCATACACTCGTGGAAACATGAACACCACCGCACCGCCTCAGCCGCGAAAGCCGCTGGAAATGCAGAATTTCCAACCACTATCTCAACTGGAGAAAATTGCAATGTTGGAAGCAGCGGAAAAAGCGGTGTCAGAGGTTTTGAGCCTCATTCAAATGGATGATACAATGTGGAAAAAGTCGTCTATTGATGATAGGCTCGTCATTGATCCAGGGCTCTATGAGAAATATTTTACTAAGACTAACACAAATGGTCGTCCTGAGTCTTCTAAAGATGTCGTGGTGGTTCAAATGGATGCTGGAAACTTGATCGACATCTTCTTAACTGCGGAGAAATGGGCGAGGCTTTTTCCAACAATTGTGAACGAAGCTAAAACGATTCACGTCTTGGATTCCGTTGACCATCGAGGAAAAACTTTCTCAAGAGTGATTTATGAGCAACTGCACATACTGTCACCATTGGTGCCACCGAGGGAATTTATGATCCTAAGGACTTGCCAACAAATTGAAGACAATGTCTGGATGATTGCTGATGTGTCGTGTCATCTCCCAAACATTGAGTTTGATCTTTCGTTTCCCATTTGCACCAAACGTCCCTCAGGTGTGCTCATTCAAGCCTTGCCCCACGGCTTCTCTAAGGTGACGTGGATAGAGCATGTGGTAGTGAATGATAATAGAGTGCGGCCACATAAGCTTTACAGAGACCTCTTATACGGCGGCTTTGGCTACGGAGCTCGACGTTGGACCGTTACTCTTGAGAGGACGTGTGAGAGGCTGATTTTCTCCACCTCCGTCCCTGCCTTGCCCAACAATGACAATCCCGGAGTTGTGCAAACAATACGAGGCAGAAATAGCGTAATGCATTTGGGAGAAAGAATGTTGAGGAACTTTGCATGGATGATGAAAATGGTTAACAAACTCGACTTCTCGCCACAGTCTGAAACTAACAACAGCGGAATTAGGATTGGGGTGCGGATAAACAATGAGGCGGGTCAACCGCCCGGTCTCATTGTCTGTGCTGGTTCATCTTTATCCCTCCCTCTCCCTCCTGTCCAAGTGTACGATTTCCTTAAGAATCTGGAGGTTCGTCACCAGTGGGACGTTCTGTGCCATGGGAATCCAGCGACTGAGGCTGCTCGTTTCGTCACCGGATCAAACCCAAGGAACACTGTGTCTTTTCTCGAGCCTTCAATTAGGGATATTAATACTAAGCTAATGATACTCCAAGATAGCTTCAAAGATGCATTGGGAGGAATGGTGGCCTACGCTCCAATGGATCTAAACACCGCCTGCGCTGCCATTTCAGGCGATATCGATCCTACCACCATTCCAATCCTCCCTTCCGGTTTTATGATCTCCCGTGACGGCCGTCCTTCCGAGGGCGAAGCCGAGGGTGGCAGCTATACACTCCTCACCGTGGCTTTCCAGATCCTTGTCTCCGGTCCGAGTTACTCTCCTGATACCAACCTGGAAGTTTCTGCCACCACAGTCAATACCTTGATTAGCTCCACCGTTCAAAGGATCAAAGCCATGCTCAAGTGCGAATGATGGTCAGTGAGAGTCGTTTGATGAAGTTACCAGTTCCCAACTCTCAACTCTTTGGTTTTTTATCTTTCTTTCTTTTTCAAATAAGTGAGAAGAGCTTTCTCCGTTTGATTCTCTAAGGAGAGTCCTAGTACTTTTCCATATTTTTCGTTGGTTTTAAAACTTATTCCAATAAATTTCTAAGGTAAGGGCCTTAGCTGAACAATATTTATGTTGTTGCCTTTTGGCATGTTTGTTTTCTGAC
CDS Sequence
Protein Sequence