Gene Details:
- Gene ID: AT5G17320
- Gene Symbol: HDG9
- Gene Name: homeodomain GLABROUS 9
- Description: homeodomain GLABROUS 9;(source:Araport11)
- TAIR Accession: locus:2167230
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009071 — anther wall tapetum — pollen sac tapetum (exact), portion of anther wall tapetal tissue (exact), tapete (Spanish, exact), 葯壁タペート組織 (Japanese, exact), Poaceae tapetum (narrow), Zea tapetum (narrow)
- PO:0025074 — embryo sac — saco embrionario (Spanish, exact), 胚嚢 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0008289 — enables — lipid binding
- GO:0005634 — located in — nucleus
Germplasm Phenotype:
- hdg8-1 hdg9-1 — No visible phenotype.
- hdg9-1 — No visible phenotype.
Function-related keywords:
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- START lipid/sterol-binding domains are amplified in plants and are predominantly associated with homeodomain transcription factors. DOI: 10.1186/gb-2004-5-6-r41 ; PMID: 15186492
- Characterization of the class IV homeodomain-Leucine Zipper gene family in Arabidopsis. DOI: 10.1104/pp.106.077388 ; PMID: 16778018
- A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis. DOI: 10.1016/j.gene.2012.07.003 ; PMID: 22796129
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Sequences:
cDNA Sequence
- >AT5G17320.1
ATGGATTTTACTCGCGATGACAACTCAAGTGATGAACGGGAAAATGATGTAGACGCCAACACCAACAACCGTCACGAGAAGAAGGGTTACCATCGCCACACTAATGAACAAATTCATAGGCTTGAAACGTATTTCAAGGAATGTCCTCATCCAGACGAATTTCAGCGACGTCTGTTGGGTGAAGAACTGAATCTGAAACCAAAACAAATCAAATTTTGGTTTCAAAACAAAAGAACTCAAGCTAAGAGTCACAATGAAAAAGCAGACAATGCAGCGCTTAGGGCAGAAAATATTAAGATTAGACGTGAGAACGAATCAATGGAAGATGCACTGAATAATGTGGTTTGCCCTCCATGTGGTGGTCGTGGTCCTGGGAGAGAAGACCAACTTCGACATCTCCAAAAACTCCGTGCACAAAACGCTTATCTCAAAGATGAGTATGAAAGAGTCTCAAACTACCTAAAACAGTACGGAGGTCACTCAATGCATAACGTCGAGGCCACACCCTATCTCCATGGTCCATCAAACCATGCATCAACGTCCAAGAACCGTCCAGCATTGTACGGAACCTCTTCTAACCGTCTCCCCGAGCCTTCAAGCATATTTAGAGGACCATACACTCGTGGAAACATGAACACCACCGCACCGCCTCAGCCGCGAAAGCCGCTGGAAATGCAGAATTTCCAACCACTATCTCAACTGGAGAAAATTGCAATGTTGGAAGCAGCGGAAAAAGCGGTGTCAGAGGTTTTGAGCCTCATTCAAATGGATGATACAATGTGGAAAAAGTCGTCTATTGATGATAGGCTCGTCATTGATCCAGGGCTCTATGAGAAATATTTTACTAAGACTAACACAAATGGTCGTCCTGAGTCTTCTAAAGATGTCGTGGTGGTTCAAATGGATGCTGGAAACTTGATCGACATCTTCTTAACTGCGGAGAAATGGGCGAGGCTTTTTCCAACAATTGTGAACGAAGCTAAAACGATTCACGTCTTGGATTCCGTTGACCATCGAGGAAAAACTTTCTCAAGAGTGATTTATGAGCAACTGCACATACTGTCACCATTGGTGCCACCGAGGGAATTTATGATCCTAAGGACTTGCCAACAAATTGAAGACAATGTCTGGATGATTGCTGATGTGTCGTGTCATCTCCCAAACATTGAGTTTGATCTTTCGTTTCCCATTTGCACCAAACGTCCCTCAGGTGTGCTCATTCAAGCCTTGCCCCACGGCTTCTCTAAGGTGACGTGGATAGAGCATGTGGTAGTGAATGATAATAGAGTGCGGCCACATAAGCTTTACAGAGACCTCTTATACGGCGGCTTTGGCTACGGAGCTCGACGTTGGACCGTTACTCTTGAGAGGACGTGTGAGAGGCTGATTTTCTCCACCTCCGTCCCTGCCTTGCCCAACAATGACAATCCCGGAGTTGTGCAAACAATACGAGGCAGAAATAGCGTAATGCATTTGGGAGAAAGAATGTTGAGGAACTTTGCATGGATGATGAAAATGGTTAACAAACTCGACTTCTCGCCACAGTCTGAAACTAACAACAGCGGAATTAGGATTGGGGTGCGGATAAACAATGAGGCGGGTCAACCGCCCGGTCTCATTGTCTGTGCTGGTTCATCTTTATCCCTCCCTCTCCCTCCTGTCCAAGTGTACGATTTCCTTAAGAATCTGGAGGTTCGTCACCAGTGGGACGTTCTGTGCCATGGGAATCCAGCGACTGAGGCTGCTCGTTTCGTCACCGGATCAAACCCAAGGAACACTGTGTCTTTTCTCGAGCCTTCAATTAGGGATATTAATACTAAGCTAATGATACTCCAAGATAGCTTCAAAGATGCATTGGGAGGAATGGTGGCCTACGCTCCAATGGATCTAAACACCGCCTGCGCTGCCATTTCAGGCGATATCGATCCTACCACCATTCCAATCCTCCCTTCCGGTTTTATGATCTCCCGTGACGGCCGTCCTTCCGAGGGCGAAGCCGAGGGTGGCAGCTATACACTCCTCACCGTGGCTTTCCAGATCCTTGTCTCCGGTCCGAGTTACTCTCCTGATACCAACCTGGAAGTTTCTGCCACCACAGTCAATACCTTGATTAGCTCCACCGTTCAAAGGATCAAAGCCATGCTCAAGTGCGAATGATGGTCAGTGAGAGTCGTTTGATGAAGTTACCAGTTCCCAACTCTCAACTCTTTGGTTTTTTATCTTTCTTTCTTTTTCAAATAAGTGAGAAGAGCTTTCTCCGTTTGATTCTCTAAGGAGAGTCCTAGTACTTTTCCATATTTTTCGTTGGTTTTAAAACTTATTCCAATAAATTTCTAAGGTAAGGGCCTTAGCTGAACAATATTTATGTTGTTGCCTTTTGGCATGTTTGTTTTCTGAC
CDS Sequence
Protein Sequence