Gene Details:
- Gene ID: AT5G17230
- Gene Symbol: PSY
- Gene Name: PHYTOENE SYNTHASE
- Description: PHYTOENE SYNTHASE;(source:Araport11)
- TAIR Accession: locus:2167225
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0016117 — involved in — carotenoid biosynthetic process
- GO:0016117 — acts upstream of or within — carotenoid biosynthetic process
- GO:0016767 — enables — geranylgeranyl-diphosphate geranylgeranyltransferase activity
- GO:0009507 — located in — chloroplast
- GO:0010287 — located in — plastoglobule
- GO:0046905 — enables — 15-cis-phytoene synthase activity
- GO:0005515 — enables — protein binding
- GO:0004311 — enables — farnesyltranstransferase activity
Function-related keywords:
Literature:
- Light-dependent regulation of carotenoid biosynthesis occurs at the level of phytoene synthase expression and is mediated by phytochrome in Sinapis alba and Arabidopsis thaliana seedlings. DOI: 10.1046/j.1365-313x.1997.00625.x ; PMID: 9351247
- Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves. DOI: 10.1104/pp.107.104828 ; PMID: 17873090
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors. DOI: 10.1073/pnas.0914428107 ; PMID: 20534526
- Regulation of Carotenoid Biosynthesis by Shade Relies on Specific Subsets of Antagonistic Transcription Factors and Cofactors. DOI: 10.1104/pp.15.00552 ; PMID: 26082398
- Tissue-Specific Apocarotenoid Glycosylation Contributes to Carotenoid Homeostasis in Arabidopsis Leaves. DOI: 10.1104/pp.15.00243 ; PMID: 26134165
- Zinc Oxide Nanoparticles Affect Biomass Accumulation and Photosynthesis in Arabidopsis. DOI: 10.3389/fpls.2015.01243 ; PMID: 26793220
- Enzyme Fusion Removes Competition for Geranylgeranyl Diphosphate in Carotenogenesis. DOI: 10.1104/pp.18.01026 ; PMID: 30309967
- Nucleo-plastidic PAP8/pTAC6 couples chloroplast formation with photomorphogenesis. DOI: 10.15252/embj.2020104941 ; PMID: 33001465
- Impact of high irradiance and UV-B on the photosynthetic activity, pro-/antioxidant balance and expression of light-activated genes in Arabidopsis thaliana hy4 mutants grown under blue light. DOI: 10.1016/j.plaphy.2021.07.030 ; PMID: 34358729
- Chloroplast-localized PITP7 is essential for plant growth and photosynthetic function in Arabidopsis. DOI: 10.1111/ppl.13760 ; PMID: 36004734
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT5G17230.3
AAAGAAGGAAGAAAATTTGAGTGGGTGAGAATTTTTTACGATAGAGGAAGAGACAGCATCATCTACTTGTGTTGTCTGTGTACATATATTACAGTAAGCGTTGCAATATAACTTCTTGAGGATCTTCTCACATTAATGGGTCAAACCTTTTGCTCTTCCTTTTGATTAATTTAGTGTTTGACAATCTCCTCCTCCTTCTCCTTCTTCTTCAAAGTTTTGTCGCAGTATCTATTGTTCTTACAGAGAGAAAGGTAGGCTTTTGTGTCCATCACTCATTTTCGCTCGTTTGGTTAAGCTTCATCTGCCATGTGGTTCACTGTTTTGATACTTTTGGGCTCTTATACCTAATGTTGATGTAACACAACGATACATAATCTAATTTGTTTTCGAGTGGAAAATAGTTGAACCCAGAAAGCTTTAGTCTTTTACCAGTTTGATCCAATTCTGGGTTTCACTGAAAAAAAGTTGGGAGTTTGATTCTTCTAACTGTAGAAGAAACAGAGTCAACAGAAGAAAACTAAAAAAGTTGAGATTTTTCTCTCACGCGCTCAAGAACTTGAGTATGTCTTCTTCTGTAGCAGTGTTATGGGTTGCTACTTCTTCTCTAAATCCAGACCCAATGAACAATTGTGGGTTGGTAAGGGTTCTAGAATCTTCTAGACTGTTCTCTCCTTGTCAGAATCAGAGACTAAACAAAGGTAAGAAGAAGCAGATACCAACTTGGAGTTCTTCTTTTGTAAGGAACCGAAGTAGAAGAATTGGTGTTGTGTCTTCAAGCTTAGTAGCAAGTCCTTCTGGAGAGATAGCTCTTTCATCTGAAGAGAAGGTTTACAATGTTGTGTTGAAACAAGCTGCTTTGGTGAACAAACAGCTAAGGTCTTCTTCTTATGACCTTGATGTGAAGAAACCACAAGATGTTGTTCTTCCTGGGAGTTTGAGTTTGTTGGGTGAAGCTTATGATCGATGCGGTGAAGTTTGCGCTGAATATGCTAAGACGTTTTATCTTGGAACTTTGCTTATGACACCCGAAAGGCGAAAGGCGATTTGGGCAATCTACGTGATGCTCAAAGTAGATTTCTACAAACAATCTATTGTGGCTCTTGTTTGGTGTAGAAGAACTGATGAACTTGTGGATGGGCCAAATGCTTCACATATAACTCCCATGGCTTTAGATAGATGGGAAGCAAGGTTAGAAGATCTTTTCCGTGGTCGTCCTTTCGATATGCTTGATGCTGCTCTCGCTGATACAGTTGCTAGATACCCGGTCGATATTCAGCCATTTCGAGACATGATCGAAGGAATGAGAATGGACTTGAAGAAATCGAGATACCAGAACTTCGATGATCTATACCTTTACTGCTACTACGTCGCTGGAACCGTCGGATTGATGAGCGTTCCGGTTATGGGAATCGATCCTAAGTCGAAAGCAACAACCGAAAGTGTTTACAACGCTGCCTTGGCCCTTGGTATAGCCAATCAGCTTACTAACATACTCAGAGACGTAGGCGAAGATGCGAGAAGAGGAAGGGTTTATCTGCCTCAGGATGAATTGGCTCAGGCTGGTCTTTCAGATGAAGACATATTCGCCGGAAAAGTAACTGATAAATGGAGAAACTTCATGAAAATGCAGCTTAAACGAGCAAGAATGTTCTTCGACGAAGCTGAGAAAGGCGTCACCGAGCTCAGTGCCGCTAGCAGATGGCCTGTATGGGCTTCATTGCTATTGTACAGGAGAATACTGGACGAGATTGAAGCGAATGATTACAACAATTTTACTAAGAGAGCTTATGTGGGGAAAGTCAAGAAAATTGCAGCTTTGCCATTGGCTTATGCTAAATCAGTACTAAAGACTTCAAGTTCAAGACTATCGATATGAGAGCGAGAGGAAAGTGGAACAAAAACAACCTAAGAGCGCTTTTTGTGATTAAGAAAAAACTTAGGCTCGAATTTATTATGTTAACTAATATATACATATTAATGGGGAAGCAAATTCTTATAATGTTACATTATCTTTCTGAATGTAAAAAAGTATTTTTTTTTTTAATTTTATTTTAGTTATAGTTCTCTTGGCCTAATGAGGGGATATACAATTTTTGGTTGAT - >AT5G17230.4
AAAGAAGGAAGAAAATTTGAGTGGGTGAGAATTTTTTACGATAGAGGAAGAGACAGCATCATCTACTTGTGTTGTCTGTGTACATATATTACAGTAAGCGTTGCAATATAACTTCTTGAGGATCTTCTCACATTAATGGGTCAAACCTTTTGCTCTTCCTTTTGATTAATTTAGTGTTTGACAATCTCCTCCTCCTTCTCCTTCTTCTTCAAAGTTTTGTCGCAGTATCTATTGTTCTTACAGAGAGAAAGGTAGGCTTTTGTGTCCATCACTCATTTTCGCTCGTTTGGTTAAGCTTCATCTGCCATGTGGTTCACTGTTTTGATACTTTTGGGCTCTTATACCTAATGTTGATGTAACACAACGATACATAATCTAATTTGTTTTCGAGTGGAAAATAGTTGAACCCAGAAAGCTTTAGTCTTTTACCAGTTTGATCCAATTCTGGGTTTCACTGAAAAAAAGTTGGGAGTTTGATTCTTCTAACTGTAGAAGAAACAGAGTCAACAGAAGAAAACTAAAAAAGTTGAGATTTTTCTCTCACGCGCTCAAGAACTTGAGTATGTCTTCTTCTGTAGCAGTGTTATGGGTTGCTACTTCTTCTCTAAATCCAGACCCAATGAACAATTGTGGGTTGGTAAGGGTTCTAGAATCTTCTAGACTGTTCTCTCCTTGTCAGAATCAGAGACTAAACAAAGGTAAGAAGAAGCAGATACCAACTTGGAGTTCTTCTTTTGTAAGGAACCGAAGTAGAAGAATTGGTGTTGTGTCTTCAAGCTTAGTAGCAAGTCCTTCTGGAGAGATAGCTCTTTCATCTGAAGAGAAGGTTTACAATGTTGTGTTGAAACAAGCTGCTTTGGTGAACAAACAGCTAAGGTCTTCTTCTTATGACCTTGATGTGAAGAAACCACAAGATGTTGTTCTTCCTGGGAGTTTGAGTTTGTTGGGTGAAGCTTATGATCGATGCGGTGAAGTTTGCGCTGAATATGCTAAGACGTTTTATCTTGGAACTTTGCTTATGACACCCGAAAGGCGAAAGGCGATTTGGGCAATCTACGTGATGCTCAAAGTAGATTTCTACAAACAATCTATTGTGGCTCTTGTTTGGTGTAGAAGAACTGATGAACTTGTGGATGGGCCAAATGCTTCACATATAACTCCCATGGCTTTAGATAGATGGGAAGCAAGGTTAGAAGATCTTTTCCGTGGTCGTCCTTTCGATATGCTTGATGCTGCTCTCGCTGATACAGTTGCTAGATACCCGGTCGATATTCAGCCATTTCGAGACATGATCGAAGGAATGAGAATGGACTTGAAGAAATCGAGATACCAGAACTTCGATGATCTATACCTTTACTGCTACTACGTCGCTGGAACCGTCGGATTGATGAGCGTTCCGGTTATGGGAATCGATCCTAAGTCGAAAGCAACAACCGAAAGTGTTTACAACGCTGCCTTGGCCCTTGGTATAGCCAATCAGCTTACTAACATACTCAGAGACGTAGGCGAAGATGCGAGAAGAGGAAGGGTTTATCTGCCTCAGGATGAATTGGCTCAGGCTGGTCTTTCAGATGAAGACATATTCGCCGGAAAAGTAACTGATAAATGGAGAAACTTCATGAAAATGCAGCTTAAACGAGCAAGAATGTTCTTCGACGAAGCTGAGAAAGGCGTCACCGAGCTCAGTGCCGCTAGCAGATGGCCTGTATGGGCTTCATTGCTATTGTACAGGAGAATACTGGACGAGATTGAAGCGAATGATTACAACAATTTTACTAAGAGAGCTTATGTGGGGAAAGTCAAGAAAATTGCAGCTTTGCCATTGGCTTATGCTAAATCAGTACTAAAGACTTCAAGTTCAAGACTATCGATATGAGAGCGAGAGGAAAGTGGAACAAAAACAACCTAAGAGCGCTTTTTGTGATTAAGAAAAAACTTAGGCTCGAATTTATTATGTTAACTAATATATACATATTAATGGGGAAGCAAATTCTTATAATGTTACATTATCTTTCTGAATGTAAAAAAGTATTTTTTTTTTTAATTTTATTTTAGTTATAGTTCTCTTGGCCTAATGAGGGGATATACAATTTTTGGTTGAT - >AT5G17230.1
AAAGAAGGAAGAAAATTTGAGTGGGTGAGAATTTTTTACGATAGAGGAAGAGACAGCATCATCTACTTGTGTTGTCTGTGTACATATATTACAGTAAGCGTTGCAATATAACTTCTTGAGGATCTTCTCACATTAATGGGTCAAACCTTTTGCTCTTCCTTTTGATTAATTTAGTGTTTGACAATCTCCTCCTCCTTCTCCTTCTTCTTCAAAGTTTTGTCGCAGTATCTATTGTTCTTACAGAGAGAAAGGTAGGCTTTTGTGTCCATCACTCATTTTCGCTCGTTTGGTTAAGCTTCATCTGCCATGTGGTTCACTGTTTTGATACTTTTGGGCTCTTATACCTAATGTTGATGTAACACAACGATACATAATCTAATTTGTTTTCGAGTGGAAAATAGTTGAACCCAGAAAGCTTTAGTCTTTTACCAGTTTGATCCAATTCTGGGTTTCACTGAAAAAAAGTTGGGAGTTTGATTCTTCTAACTGTAGAAGAAACAGAGTCAACAGAAGAAAACTAAAAAAGTTGAGATTTTTCTCTCACGCGCTCAAGAACTTGAGTATGTCTTCTTCTGTAGCAGTGTTATGGGTTGCTACTTCTTCTCTAAATCCAGACCCAATGAACAATTGTGGGTTGGTAAGGGTTCTAGAATCTTCTAGACTGTTCTCTCCTTGTCAGAATCAGAGACTAAACAAAGGTAAGAAGAAGCAGATACCAACTTGGAGTTCTTCTTTTGTAAGGAACCGAAGTAGAAGAATTGGTGTTGTGTCTTCAAGCTTAGTAGCAAGTCCTTCTGGAGAGATAGCTCTTTCATCTGAAGAGAAGGTTTACAATGTTGTGTTGAAACAAGCTGCTTTGGTGAACAAACAGCTAAGGTCTTCTTCTTATGACCTTGATGTGAAGAAACCACAAGATGTTGTTCTTCCTGGGAGTTTGAGTTTGTTGGGTGAAGCTTATGATCGATGCGGTGAAGTTTGCGCTGAATATGCTAAGACGTTTTATCTTGGAACTTTGCTTATGACACCCGAAAGGCGAAAGGCGATTTGGGCAATCTACGTGATGCTCAAAGTAGATTTCTACAAACAATCTATTGTGGCTCTTGTTTGGTGTAGAAGAACTGATGAACTTGTGGATGGGCCAAATGCTTCACATATAACTCCCATGGCTTTAGATAGATGGGAAGCAAGGTTAGAAGATCTTTTCCGTGGTCGTCCTTTCGATATGCTTGATGCTGCTCTCGCTGATACAGTTGCTAGATACCCGGTCGATATTCAGCCATTTCGAGACATGATCGAAGGAATGAGAATGGACTTGAAGAAATCGAGATACCAGAACTTCGATGATCTATACCTTTACTGCTACTACGTCGCTGGAACCGTCGGATTGATGAGCGTTCCGGTTATGGGAATCGATCCTAAGTCGAAAGCAACAACCGAAAGTGTTTACAACGCTGCCTTGGCCCTTGGTATAGCCAATCAGCTTACTAACATACTCAGAGACGTAGGCGAAGATGCGAGAAGAGGAAGGGTTTATCTGCCTCAGGATGAATTGGCTCAGGCTGGTCTTTCAGATGAAGACATATTCGCCGGAAAAGTAACTGATAAATGGAGAAACTTCATGAAAATGCAGCTTAAACGAGCAAGAATGTTCTTCGACGAAGCTGAGAAAGGCGTCACCGAGCTCAGTGCCGCTAGCAGATGGCCTGTATGGGCTTCATTGCTATTGTACAGGAGAATACTGGACGAGATTGAAGCGAATGATTACAACAATTTTACTAAGAGAGCTTATGTGGGGAAAGTCAAGAAAATTGCAGCTTTGCCATTGGCTTATGCTAAATCAGTACTAAAGACTTCAAGTTCAAGACTATCGATATGAGAGCGAGAGGAAAGTGGAACAAAAACAACCTAAGAGCGCTTTTTGTGATTAAGAAAAAACTTAGGCTCGAATTTATTATGTTAACTAATATATACATATTAATGGGGAAGCAAATTCTTATAATGTTACATTATCTTTCTGAATGTAAAAAAGTATTTTTTTTTTTAATTTTATTTTAGTTATAGTTCTCTTGGCCTAATGAGGGGATATACAATTTTTGGTTGAT - >AT5G17230.2
AAAGAAGGAAGAAAATTTGAGTGGGTGAGAATTTTTTACGATAGAGGAAGAGACAGCATCATCTACTTGTGTTGTCTGTGTACATATATTACAGTAAGCGTTGCAATATAACTTCTTGAGGATCTTCTCACATTAATGGGTCAAACCTTTTGCTCTTCCTTTTGATTAATTTAGTGTTTGACAATCTCCTCCTCCTTCTCCTTCTTCTTCAAAGTTTTGTCGCAGTATCTATTGTTCTTACAGAGAGAAAGGTAGGCTTTTGTGTCCATCACTCATTTTCGCTCGTTTGGTTAAGCTTCATCTGCCATGTGGTTCACTGTTTTGATACTTTTGGGCTCTTATACCTAATGTTGATGTAACACAACGATACATAATCTAATTTGTTTTCGAGTGGAAAATAGTTGAACCCAGAAAGCTTTAGTCTTTTACCAGTTTGATCCAATTCTGGGTTTCACTGAAAAAAAGTTGGGAGTTTGATTCTTCTAACTGTAGAAGAAACAGAGTCAACAGAAGAAAACTAAAAAAGTTGAGATTTTTCTCTCACGCGCTCAAGAACTTGAGTATGTCTTCTTCTGTAGCAGTGTTATGGGTTGCTACTTCTTCTCTAAATCCAGACCCAATGAACAATTGTGGGTTGGTAAGGGTTCTAGAATCTTCTAGACTGTTCTCTCCTTGTCAGAATCAGAGACTAAACAAAGGTAAGAAGAAGCAGATACCAACTTGGAGTTCTTCTTTTGTAAGGAACCGAAGTAGAAGAATTGGTGTTGTGTCTTCAAGCTTAGTAGCAAGTCCTTCTGGAGAGATAGCTCTTTCATCTGAAGAGAAGGTTTACAATGTTGTGTTGAAACAAGCTGCTTTGGTGAACAAACAGCTAAGGTCTTCTTCTTATGACCTTGATGTGAAGAAACCACAAGATGTTGTTCTTCCTGGGAGTTTGAGTTTGTTGGGTGAAGCTTATGATCGATGCGGTGAAGTTTGCGCTGAATATGCTAAGACGTTTTATCTTGGAACTTTGCTTATGACACCCGAAAGGCGAAAGGCGATTTGGGCAATCTACGTGATGCTCAAAGTAGATTTCTACAAACAATCTATTGTGGCTCTTGTTTGGTGTAGAAGAACTGATGAACTTGTGGATGGGCCAAATGCTTCACATATAACTCCCATGGCTTTAGATAGATGGGAAGCAAGGTTAGAAGATCTTTTCCGTGGTCGTCCTTTCGATATGCTTGATGCTGCTCTCGCTGATACAGTTGCTAGATACCCGGTCGATATTCAGCCATTTCGAGACATGATCGAAGGAATGAGAATGGACTTGAAGAAATCGAGATACCAGAACTTCGATGATCTATACCTTTACTGCTACTACGTCGCTGGAACCGTCGGATTGATGAGCGTTCCGGTTATGGGAATCGATCCTAAGTCGAAAGCAACAACCGAAAGTGTTTACAACGCTGCCTTGGCCCTTGGTATAGCCAATCAGCTTACTAACATACTCAGAGACGTAGGCGAAGATGCGAGAAGAGGAAGGGTTTATCTGCCTCAGGATGAATTGGCTCAGGCTGGTCTTTCAGATGAAGACATATTCGCCGGAAAAGTAACTGATAAATGGAGAAACTTCATGAAAATGCAGCTTAAACGAGCAAGAATGTTCTTCGACGAAGCTGAGAAAGGCGTCACCGAGCTCAGTGCCGCTAGCAGATGGCCTGTATGGGCTTCATTGCTATTGTACAGGAGAATACTGGACGAGATTGAAGCGAATGATTACAACAATTTTACTAAGAGAGCTTATGTGGGGAAAGTCAAGAAAATTGCAGCTTTGCCATTGGCTTATGCTAAATCAGTACTAAAGACTTCAAGTTCAAGACTATCGATATGAGAGCGAGAGGAAAGTGGAACAAAAACAACCTAAGAGCGCTTTTTGTGATTAAGAAAAAACTTAGGCTCGAATTTATTATGTTAACTAATATATACATATTAATGGGGAAGCAAATTCTTATAATGTTACATTATCTTTCTGAATGTAAAAAAGTATTTTTTTTTTTAATTTTATTTTAGTTATAGTTCTCTTGGCCTAATGAGGGGATATACAATTTTTGGTTGAT
CDS Sequence
Protein Sequence