Information report for AT5G16880
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Exploring the ESCRTing machinery in eukaryotes. DOI: 10.1016/j.tplants.2006.01.008 ; PMID: 16488176
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Arabidopsis TOL proteins act as gatekeepers for vacuolar sorting of PIN2 plasma membrane protein. DOI: 10.1016/j.cub.2013.10.036 ; PMID: 24316203
- Expression of Arabidopsis TOL genes. DOI: 10.4161/psb.28667 ; PMID: 24699223
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: A0A178UI99
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UI99
- EnsemblPlants: AT5G16880.1, AT5G16880.2, AT5G16880.4
- Gramene: AT5G16880.1, AT5G16880.2, AT5G16880.4
- KEGG: ath:AT5G16880
- Orthologous matrix: QPEPAMI
- ExpressionAtlas: AT5G16880
- InterPro: IPR002014, IPR004152, IPR008942
- PANTHER: PTHR46646, PTHR46646:SF1
- SUPFAM: SSF48464, SSF89009
- PROSITE: PS50179, PS50909
- Gene3D: 1.20.58.160, 1.25.40.90
- OrthoDB: A0A178UI99
- SWISS-MODEL: A0A178UI99
- Conserved Domain Database: cd03561, cd14231
Sequences
cDNA Sequence
- >AT5G16880.2
GGGAAACATAGTCAGGATAAAGTAATTCCCACGACCAAACACTTAAAAAAGGAACGCAGTTTTCTTCTTCTTCAGGATTTGTACGGCGTCAACGGGCATTGACCTTGTCGCAGATTTTCCTCTCTAGTCTCCGTCTTCTATTACCAGATCGAGCTTTGTTCTTCGAGCTTCTCATCTCTTTGTTCAATCTCAAAGGTTTTTGAGTATCAGCAAAGATGGGTGACAATCTTATGGACAAAGTTACCGCATTTGGTGAGCGCCTGAAGATCGGAGGTTCGGAAGTGAGCAACAAGATCAGTGCTGGTGTGAGCTCAATGAGCTTTAAAGTGAAGGAACTTTTTCAAGGTCCAAACCCAACTGATAAAATAGTCGAAGATGCTACTACTGAGAATCTAGAGGAACCTGACTGGGATATGAATTTGGAAATTTGTGATATGATAAATCAAGAGACAATTAATAGCGTTGAGTTGATCCGTGGTATAAAGAAGAGGATTATGATGAAGCAGCCGAGGATTCAGTACCTTGCCTTGGTTTTGCTCGAGACGTGTGTTAAGAACTGTGAGAAGGCGTTTTCAGAGGTGGCAGCAGAGAGAGTCCTTGATGAAATGGTAAAGCTGATTGATGATCCACAAACAGTTGTTAATAACCGAAACAAAGCTTTGATGCTGATTGAAGCTTGGGGAGAATCAACCAGTGAACTTCGCTACCTACCAGTTTTCGAAGAAACTTATAAGAGCTTAAAAGCAAGAGGTATTCGCTTCCCTGGACGAGACAACGAAAGCTTGGCACCTATTTTCACTCCTGCTCGGTCAACTCCAGCACCAGAACTGAATGCTGATCTTCCTCAGCATGTGCATGAACCTGCACATATCCAGTATGATGTGCCTGTAAGAAGCTTTACTGCTGAGCAGACAAAGGAAGCTTTTGATATAGCAAGAAACAGCATTGAACTTCTTTCCACGGTTCTGTCCTCCTCGCCTCAACATGATGCTTTACAGGATGACTTAACAACGACACTTGTACAACAATGTCGTCAATCTCAAACCACTGTCCAAAGAATCATTGAAACAGCAGGTGAAAACGAAGCCCTTCTTTTCGAAGCCTTGAATGTGAACGACGAGCTAGTGAAAACGCTGTCTAAGTATGAGGAGATGAACAAACCCTCTGCACCGCTAACCTCACATGAACCAGCCATGATTCCCGTTGCTGAAGAGCCCGATGACTCTCCAATTCATGGAAGAGAAGAATCTCTGGTTAGAAAATCTTCTGGTGTTCGAGGTGGATTCCATGGAGGGGGTGGTAGTGGAGATGACATGATGGATGATCTTGATGAGATGATATTCGGTAAGAAAAACGGCTGTGATTCTTCGACTAATCCAGATCATGACCCAAAAAAGGAGCAGTCCTCATCCAAAAACGACGATCTCATTCGATTCTGAGACGGATACTTTCAGGCGACATAATAAATCTTTTATAATGTATTTGGTGTTTAATTGGTAGTATGAATGAACAGGTTCAATGTAAGTAATCTGTGTTTGGAGATCTCTTTGACTTGTGTGATGGTTTATAAAGGAGATTTGTTATGATGGCACATGAGATTTGAAATACATTCTATTCTAGTTTCTGCTATCAAACACATTTTGACATCTATCCAATTGCTATCGTGCACATTTG - >AT5G16880.1
GGGAAACATAGTCAGGATAAAGTAATTCCCACGACCAAACACTTAAAAAAGGAACGCAGTTTTCTTCTTCTTCAGGATTTGTACGGCGTCAACGGGCATTGACCTTGTCGCAGATTTTCCTCTCTAGTCTCCGTCTTCTATTACCAGATCGAGCTTTGTTCTTCGAGCTTCTCATCTCTTTGTTCAATCTCAAAGGTTTTTGAGTATCAGCAAAGATGGGTGACAATCTTATGGACAAAGTTACCGCATTTGGTGAGCGCCTGAAGATCGGAGGTTCGGAAGTGAGCAACAAGATCAGTGCTGGTGTGAGCTCAATGAGCTTTAAAGTGAAGGAACTTTTTCAAGGTCCAAACCCAACTGATAAAATAGTCGAAGATGCTACTACTGAGAATCTAGAGGAACCTGACTGGGATATGAATTTGGAAATTTGTGATATGATAAATCAAGAGACAATTAATAGCGTTGAGTTGATCCGTGGTATAAAGAAGAGGATTATGATGAAGCAGCCGAGGATTCAGTACCTTGCCTTGGTTTTGCTCGAGACGTGTGTTAAGAACTGTGAGAAGGCGTTTTCAGAGGTGGCAGCAGAGAGAGTCCTTGATGAAATGGTAAAGCTGATTGATGATCCACAAACAGTTGTTAATAACCGAAACAAAGCTTTGATGCTGATTGAAGCTTGGGGAGAATCAACCAGTGAACTTCGCTACCTACCAGTTTTCGAAGAAACTTATAAGAGCTTAAAAGCAAGAGGTATTCGCTTCCCTGGACGAGACAACGAAAGCTTGGCACCTATTTTCACTCCTGCTCGGTCAACTCCAGCACCAGAACTGAATGCTGATCTTCCTCAGCATGTGCATGAACCTGCACATATCCAGTATGATGTGCCTGTAAGAAGCTTTACTGCTGAGCAGACAAAGGAAGCTTTTGATATAGCAAGAAACAGCATTGAACTTCTTTCCACGGTTCTGTCCTCCTCGCCTCAACATGATGCTTTACAGGATGACTTAACAACGACACTTGTACAACAATGTCGTCAATCTCAAACCACTGTCCAAAGAATCATTGAAACAGCAGGTGAAAACGAAGCCCTTCTTTTCGAAGCCTTGAATGTGAACGACGAGCTAGTGAAAACGCTGTCTAAGTATGAGGAGATGAACAAACCCTCTGCACCGCTAACCTCACATGAACCAGCCATGATTCCCGTTGCTGAAGAGCCCGATGACTCTCCAATTCATGGAAGAGAAGAATCTCTGGTTAGAAAATCTTCTGGTGTTCGAGGTGGATTCCATGGAGGGGGTGGTAGTGGAGATGACATGATGGATGATCTTGATGAGATGATATTCGGTAAGAAAAACGGCTGTGATTCTTCGACTAATCCAGATCATGACCCAAAAAAGGAGCAGTCCTCATCCAAAAACGACGATCTCATTCGATTCTGAGACGGATACTTTCAGGCGACATAATAAATCTTTTATAATGTATTTGGTGTTTAATTGGTAGTATGAATGAACAGGTTCAATGTAAGTAATCTGTGTTTGGAGATCTCTTTGACTTGTGTGATGGTTTATAAAGGAGATTTGTTATGATGGCACATGAGATTTGAAATACATTCTATTCTAGTTTCTGCTATCAAACACATTTTGACATCTATCCAATTGCTATCGTGCACATTTG - >AT5G16880.4
GGGAAACATAGTCAGGATAAAGTAATTCCCACGACCAAACACTTAAAAAAGGAACGCAGTTTTCTTCTTCTTCAGGATTTGTACGGCGTCAACGGGCATTGACCTTGTCGCAGATTTTCCTCTCTAGTCTCCGTCTTCTATTACCAGATCGAGCTTTGTTCTTCGAGCTTCTCATCTCTTTGTTCAATCTCAAAGGTTTTTGAGTATCAGCAAAGATGGGTGACAATCTTATGGACAAAGTTACCGCATTTGGTGAGCGCCTGAAGATCGGAGGTTCGGAAGTGAGCAACAAGATCAGTGCTGGTGTGAGCTCAATGAGCTTTAAAGTGAAGGAACTTTTTCAAGGTCCAAACCCAACTGATAAAATAGTCGAAGATGCTACTACTGAGAATCTAGAGGAACCTGACTGGGATATGAATTTGGAAATTTGTGATATGATAAATCAAGAGACAATTAATAGCGTTGAGTTGATCCGTGGTATAAAGAAGAGGATTATGATGAAGCAGCCGAGGATTCAGTACCTTGCCTTGGTTTTGCTCGAGACGTGTGTTAAGAACTGTGAGAAGGCGTTTTCAGAGGTGGCAGCAGAGAGAGTCCTTGATGAAATGGTAAAGCTGATTGATGATCCACAAACAGTTGTTAATAACCGAAACAAAGCTTTGATGCTGATTGAAGCTTGGGGAGAATCAACCAGTGAACTTCGCTACCTACCAGTTTTCGAAGAAACTTATAAGAGCTTAAAAGCAAGAGGTATTCGCTTCCCTGGACGAGACAACGAAAGCTTGGCACCTATTTTCACTCCTGCTCGGTCAACTCCAGCACCAGAACTGAATGCTGATCTTCCTCAGCATGTGCATGAACCTGCACATATCCAGTATGATGTGCCTGTAAGAAGCTTTACTGCTGAGCAGACAAAGGAAGCTTTTGATATAGCAAGAAACAGCATTGAACTTCTTTCCACGGTTCTGTCCTCCTCGCCTCAACATGATGCTTTACAGGATGACTTAACAACGACACTTGTACAACAATGTCGTCAATCTCAAACCACTGTCCAAAGAATCATTGAAACAGCAGGTGAAAACGAAGCCCTTCTTTTCGAAGCCTTGAATGTGAACGACGAGCTAGTGAAAACGCTGTCTAAGTATGAGGAGATGAACAAACCCTCTGCACCGCTAACCTCACATGAACCAGCCATGATTCCCGTTGCTGAAGAGCCCGATGACTCTCCAATTCATGGAAGAGAAGAATCTCTGGTTAGAAAATCTTCTGGTGTTCGAGGTGGATTCCATGGAGGGGGTGGTAGTGGAGATGACATGATGGATGATCTTGATGAGATGATATTCGGTAAGAAAAACGGCTGTGATTCTTCGACTAATCCAGATCATGACCCAAAAAAGGAGCAGTCCTCATCCAAAAACGACGATCTCATTCGATTCTGAGACGGATACTTTCAGGCGACATAATAAATCTTTTATAATGTATTTGGTGTTTAATTGGTAGTATGAATGAACAGGTTCAATGTAAGTAATCTGTGTTTGGAGATCTCTTTGACTTGTGTGATGGTTTATAAAGGAGATTTGTTATGATGGCACATGAGATTTGAAATACATTCTATTCTAGTTTCTGCTATCAAACACATTTTGACATCTATCCAATTGCTATCGTGCACATTTG - >AT5G16880.3
GGGAAACATAGTCAGGATAAAGTAATTCCCACGACCAAACACTTAAAAAAGGAACGCAGTTTTCTTCTTCTTCAGGATTTGTACGGCGTCAACGGGCATTGACCTTGTCGCAGATTTTCCTCTCTAGTCTCCGTCTTCTATTACCAGATCGAGCTTTGTTCTTCGAGCTTCTCATCTCTTTGTTCAATCTCAAAGGTTTTTGAGTATCAGCAAAGATGGGTGACAATCTTATGGACAAAGTTACCGCATTTGGTGAGCGCCTGAAGATCGGAGGTTCGGAAGTGAGCAACAAGATCAGTGCTGGTGTGAGCTCAATGAGCTTTAAAGTGAAGGAACTTTTTCAAGGTCCAAACCCAACTGATAAAATAGTCGAAGATGCTACTACTGAGAATCTAGAGGAACCTGACTGGGATATGAATTTGGAAATTTGTGATATGATAAATCAAGAGACAATTAATAGCGTTGAGTTGATCCGTGGTATAAAGAAGAGGATTATGATGAAGCAGCCGAGGATTCAGTACCTTGCCTTGGTTTTGCTCGAGACGTGTGTTAAGAACTGTGAGAAGGCGTTTTCAGAGGTGGCAGCAGAGAGAGTCCTTGATGAAATGGTAAAGCTGATTGATGATCCACAAACAGTTGTTAATAACCGAAACAAAGCTTTGATGCTGATTGAAGCTTGGGGAGAATCAACCAGTGAACTTCGCTACCTACCAGTTTTCGAAGAAACTTATAAGAGCTTAAAAGCAAGAGGTATTCGCTTCCCTGGACGAGACAACGAAAGCTTGGCACCTATTTTCACTCCTGCTCGGTCAACTCCAGCACCAGAACTGAATGCTGATCTTCCTCAGCATGTGCATGAACCTGCACATATCCAGTATGATGTGCCTGTAAGAAGCTTTACTGCTGAGCAGACAAAGGAAGCTTTTGATATAGCAAGAAACAGCATTGAACTTCTTTCCACGGTTCTGTCCTCCTCGCCTCAACATGATGCTTTACAGGATGACTTAACAACGACACTTGTACAACAATGTCGTCAATCTCAAACCACTGTCCAAAGAATCATTGAAACAGCAGGTGAAAACGAAGCCCTTCTTTTCGAAGCCTTGAATGTGAACGACGAGCTAGTGAAAACGCTGTCTAAGTATGAGGAGATGAACAAACCCTCTGCACCGCTAACCTCACATGAACCAGCCATGATTCCCGTTGCTGAAGAGCCCGATGACTCTCCAATTCATGGAAGAGAAGAATCTCTGGTTAGAAAATCTTCTGGTGTTCGAGGTGGATTCCATGGAGGGGGTGGTAGTGGAGATGACATGATGGATGATCTTGATGAGATGATATTCGGTAAGAAAAACGGCTGTGATTCTTCGACTAATCCAGATCATGACCCAAAAAAGGAGCAGTCCTCATCCAAAAACGACGATCTCATTCGATTCTGAGACGGATACTTTCAGGCGACATAATAAATCTTTTATAATGTATTTGGTGTTTAATTGGTAGTATGAATGAACAGGTTCAATGTAAGTAATCTGTGTTTGGAGATCTCTTTGACTTGTGTGATGGTTTATAAAGGAGATTTGTTATGATGGCACATGAGATTTGAAATACATTCTATTCTAGTTTCTGCTATCAAACACATTTTGACATCTATCCAATTGCTATCGTGCACATTTG
CDS Sequence
Protein Sequence