Gene Details:
- Gene ID: AT5G16830
- Gene Symbol: ATPEP12, ATSYP21, PEP12, PEP12P, SYP21
- Gene Name: syntaxin of plants 21
- Description: syntaxin of plants 21;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Germplasm Phenotype:
- CS68721 — No visible phenotype.
Function-related keywords:
Literature:
- AtVPS45 complex formation at the trans-Golgi network. DOI: 10.1091/mbc.11.7.2251 ; PMID: 10888666
- The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. DOI: 10.1104/pp.124.4.1558 ; PMID: 11115874
- Interactions between syntaxins identify at least five SNARE complexes within the Golgi/prevacuolar system of the Arabidopsis cell. DOI: 10.1091/mbc.12.12.3733 ; PMID: 11739776
- Arabidopsis EPSIN1 plays an important role in vacuolar trafficking of soluble cargo proteins in plant cells via interactions with clathrin, AP-1, VTI11, and VSR1. DOI: 10.1105/tpc.105.039123 ; PMID: 16905657
- Selective targeting of plasma membrane and tonoplast traffic by inhibitory (dominant-negative) SNARE fragments. DOI: 10.1111/j.1365-313X.2007.03206.x ; PMID: 17662029
- Split luciferase complementation assay to study protein-protein interactions in Arabidopsis protoplasts. DOI: 10.1111/j.1365-313X.2007.03214.x ; PMID: 17662028
- The GRV2/RME-8 protein of Arabidopsis functions in the late endocytic pathway and is required for vacuolar membrane flow. DOI: 10.1111/j.1365-313X.2007.03314.x ; PMID: 17971043
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional anatomy of the Arabidopsis cytokinesis-specific syntaxin KNOLLE. DOI: 10.1111/j.1365-313X.2011.04736.x ; PMID: 21838778
- Interactomics of Qa-SNARE in Arabidopsis thaliana. DOI: 10.1093/pcp/pcu038 ; PMID: 24556609
- The Arabidopsis R-SNARE protein YKT61 is essential for gametophyte development. DOI: 10.1111/jipb.13017 ; PMID: 32918784
- SNAREs Regulate Vesicle Trafficking During Root Growth and Development. DOI: 10.3389/fpls.2022.853251 ; PMID: 35360325
- The GRV2/RME-8 protein of Arabidopsis functions in the late endocytic pathway and is required for vacuolar membrane flow. DOI: 10.1111/j.1365-313X.2007.03314.x ; PMID: 17971043
Sequences:
cDNA Sequence
- >AT5G16830.1
ATTTATACAAATTATAAAACAAAAATTAACATTAAATTTTGGGAAAACTTATAATTCACCTAACTCATTTCCATCATCTTCGTCTTCGTTTGTTCCCCTGAGATAGAGATAAGAGAATTTCGAGAGATTCGAGAGAAGAGACGATGAGTTTCCAAGATCTCGAAGCTGGTACTCGATCTCCGGCGCCGAATCGTTTTACCGGTGGGAGACAACAGAGACCTTCGTCTCGTGGGGATCCATCTCAGGAGGTCGCCGCCGGGATTTTCAGGATCAGCACGGCTGTCAATTCCTTCTTCCGCCTCGTTAATTCGATCGGAACACCTAAAGATACTCTTGAATTACGAGATAAGCTGCAAAAGACAAGGTTACAGATATCCGAATTGGTGAAGAATACTTCAGCTAAACTTAAGGAAGCTAGCGAAGCCGACCTTCATGGATCAGCTAGTCAAATTAAGAAGATAGCTGATGCTAAACTGGCAAAAGATTTCCAATCAGTTCTCAAAGAGTTTCAGAAAGCTCAGAGACTTGCAGCTGAAAGAGAAATAACATATACTCCTGTGGTCACAAAAGAAATACCTACCAGTTATAATGCACCTGAACTGGATACTGAATCTTTAAGGATCTCCCAGCAGCAAGCTCTTCTTCTACAATCAAGAAGGCAAGAAGTGGTGTTTTTAGATAACGAGATAACATTCAATGAAGCAATTATTGAGGAAAGAGAGCAAGGGATTCGAGAAATTGAAGACCAGATTCGTGATGTGAATGGCATGTTCAAAGATCTAGCTCTTATGGTGAACCATCAAGGAAATATTGTCGATGACATCAGCTCTAACCTTGACAACTCACATGCTGCAACTACACAAGCCACTGTTCAACTCAGAAAAGCAGCTAAAACTCAAAGATCAAACTCCTCTTTGACATGCCTACTTATTCTCATTTTTGGGATTGTTCTACTCATTGTCATCATCGTTGTCTTGGTCTAAGCATCAAACATATAACTCCAAGCTTCAATCTTCAAGCATCAAGCGAATCTATGGAAACTATACAAAGACCCATTAAAGATATATATCTAATGTACAGATTCTTTATACTCCATCTTCCCCATTCAACCAAATTGATCTTAACTTCTCATCGTGTGAATGTTTAATCAATGTATTACTCCATCATAAGGATCTTCATGATCAAAAGAAATAAACATAAGAAAATAATCTTG
CDS Sequence
Protein Sequence