Information report for AT5G16770
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- SAIL_856_F11 — No obvious morphological phenotype.
Functional Keywords
Literature and News
- Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00278.x ; PMID: 9839469
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: and shoot-specific genes. DOI: 10.1111/j.1365-313X.2004.02051.x ; PMID: 15078338
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana. DOI: 10.1111/tpj.14759 ; PMID: 32246506
- Disruption of the ABA1 encoding zeaxanthin epoxidase caused defective suberin layers in Arabidopsis seed coats. DOI: 10.3389/fpls.2023.1156356 ; PMID: 37008500
- Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00278.x ; PMID: 9839469
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: Q9LFE1
- EMBL: AL391147, CP002688
- AlphaFoldDB: Q9LFE1
- EnsemblPlants: AT5G16770.3, AT5G16770.4
- Gramene: AT5G16770.3, AT5G16770.4
- KEGG: ath:AT5G16770
- Orthologous matrix: ENQMIDQ
- ExpressionAtlas: AT5G16770
Sequences
cDNA Sequence
- >AT5G16770.3
CAAATATTATGATAAGTTTCCACAAGGGCATTTTCGTCATTCTGTGGTCAGCAAAGTCAAAAGCTAAACTAAGATCTTCTCCGTCCGACAAGATACAAAGACACGAAACACAAATGCCCTATTTAATGCAAAGATCACACACACACTTAGCCTCATTCACTAAGATCCTTAATTGGATTGCCTTCATCAGAATCTTTCTCCCTTGAGAGTTCTAGGAGATCTTCAACAGCTAGTAATAATGGGGCGATCACCATGTTGCGATGAGAATGGTCTAAAGAAAGGGCCATGGACACAAGAGGAGGATGATAAACTGATAGATCACATTCAAAAACATGGCCATGGCAGCTGGAGAGCTCTTCCAAAGCAAGCCGGTTTAAACCGATGCGGAAAGAGTTGTAGATTAAGATGGACCAACTACTTGAGACCTGACATCAAGAGAGGAAATTTCACTGAAGAGGAAGAACAAACTATTATCAACCTCCATTCCCTTCTTGGAAACAAGTGGTCGTCGATAGCCGGTAATCTTCCTGGAAGAACGGACAATGAAATAAAAAACTATTGGAACACACATTTGAGAAAGAAACTTCTCCAAATGGGGATTGATCCGGTGACCCATAGGCCAAGAACCGACCATCTAAACGTTTTAGCAGCTCTCCCGCAGCTTATAGCCGCCGCAAATTTCAACAGCCTCTTGAATCTCAACCAAAATGTGCAACTGGATGCAACAACTCTTGCTAAAGCTCAACTGCTACACACTATGATTCAAGTCCTTAGCACCAATAACAACACCACCAATCCTTCTTTTTCTTCATCAACTATGCAAAACAGTAACACCAATCTCTTTGGCCAAGCTTCTTACTTAGAGAACCAAAATCTTTTTGGTCAGTCTCAAAACTTCTCTCACATTCTTGAGGATGAGAATTTGATGGTCAAAACCCAAATTATTGATAACCCTTTGGACTCTTTTTCTTCCCCCATACAACCCGGTTTTCAAGATGATCATAATTCACTCCCTCTATTGGTTCCGGCGTCTCCTGAAGAATCTAAAGAAACTCAAAGGATGATCAAGAACAAAGACATCGTCGATTACCATCATCATGATGCTTCAAACCCTTCATCATCAAACTCAACGTTTACACAAGATCATCATCACCCATGGTGTGACACTATTGATGATGGAGCAAGTGATTCTTTTTGGAAAGAGATAATAGAGTAAGTCCTATCAGTACTCTCCCACATAGATTGAATTTTATAGTTACCACATGAATGCATTCAGTGAATATGGACGATTTGGCTAGTCTAATGTTATAATTCTCCGTTTTGCAGGCAAACTTGTTCGGAACCATGGCCATTTCCTGAATAGACAAGATTGAAAAATGATTAAAGAGAGAGTATATTTATTTTTCTTGTTATTTGTTGTCGATAGAGTTAAAAGCATATTTATTCTTCACTAATCCTTACCGTGTTTTTTTTGTAAGACCATGTGTGTGTGGTAAACATTGATCTTGTACAAACTTGATTACATTACTGTATTAATACAAATATTCGTGTTTGTAATTACTTTCATAAATCTAATTTATCTGCTTTACAAAAAAAATACAAACGTTGATTTCTTTTTGTTTTCAAATATATAAAGTACAAAGACGAACGCAAATATATTCTTCCATTTGATTTCTTATTAAATTAAAAAGTAAATATACTATCTACACGTAAACGCATACGCCAATGCAATAAAAACAATTTGTCTCCTATTAATTATAATCTAGTCAACACGTAAAAAAC - >AT5G16770.4
CAAATATTATGATAAGTTTCCACAAGGGCATTTTCGTCATTCTGTGGTCAGCAAAGTCAAAAGCTAAACTAAGATCTTCTCCGTCCGACAAGATACAAAGACACGAAACACAAATGCCCTATTTAATGCAAAGATCACACACACACTTAGCCTCATTCACTAAGATCCTTAATTGGATTGCCTTCATCAGAATCTTTCTCCCTTGAGAGTTCTAGGAGATCTTCAACAGCTAGTAATAATGGGGCGATCACCATGTTGCGATGAGAATGGTCTAAAGAAAGGGCCATGGACACAAGAGGAGGATGATAAACTGATAGATCACATTCAAAAACATGGCCATGGCAGCTGGAGAGCTCTTCCAAAGCAAGCCGGTTTAAACCGATGCGGAAAGAGTTGTAGATTAAGATGGACCAACTACTTGAGACCTGACATCAAGAGAGGAAATTTCACTGAAGAGGAAGAACAAACTATTATCAACCTCCATTCCCTTCTTGGAAACAAGTGGTCGTCGATAGCCGGTAATCTTCCTGGAAGAACGGACAATGAAATAAAAAACTATTGGAACACACATTTGAGAAAGAAACTTCTCCAAATGGGGATTGATCCGGTGACCCATAGGCCAAGAACCGACCATCTAAACGTTTTAGCAGCTCTCCCGCAGCTTATAGCCGCCGCAAATTTCAACAGCCTCTTGAATCTCAACCAAAATGTGCAACTGGATGCAACAACTCTTGCTAAAGCTCAACTGCTACACACTATGATTCAAGTCCTTAGCACCAATAACAACACCACCAATCCTTCTTTTTCTTCATCAACTATGCAAAACAGTAACACCAATCTCTTTGGCCAAGCTTCTTACTTAGAGAACCAAAATCTTTTTGGTCAGTCTCAAAACTTCTCTCACATTCTTGAGGATGAGAATTTGATGGTCAAAACCCAAATTATTGATAACCCTTTGGACTCTTTTTCTTCCCCCATACAACCCGGTTTTCAAGATGATCATAATTCACTCCCTCTATTGGTTCCGGCGTCTCCTGAAGAATCTAAAGAAACTCAAAGGATGATCAAGAACAAAGACATCGTCGATTACCATCATCATGATGCTTCAAACCCTTCATCATCAAACTCAACGTTTACACAAGATCATCATCACCCATGGTGTGACACTATTGATGATGGAGCAAGTGATTCTTTTTGGAAAGAGATAATAGAGTAAGTCCTATCAGTACTCTCCCACATAGATTGAATTTTATAGTTACCACATGAATGCATTCAGTGAATATGGACGATTTGGCTAGTCTAATGTTATAATTCTCCGTTTTGCAGGCAAACTTGTTCGGAACCATGGCCATTTCCTGAATAGACAAGATTGAAAAATGATTAAAGAGAGAGTATATTTATTTTTCTTGTTATTTGTTGTCGATAGAGTTAAAAGCATATTTATTCTTCACTAATCCTTACCGTGTTTTTTTTGTAAGACCATGTGTGTGTGGTAAACATTGATCTTGTACAAACTTGATTACATTACTGTATTAATACAAATATTCGTGTTTGTAATTACTTTCATAAATCTAATTTATCTGCTTTACAAAAAAAATACAAACGTTGATTTCTTTTTGTTTTCAAATATATAAAGTACAAAGACGAACGCAAATATATTCTTCCATTTGATTTCTTATTAAATTAAAAAGTAAATATACTATCTACACGTAAACGCATACGCCAATGCAATAAAAACAATTTGTCTCCTATTAATTATAATCTAGTCAACACGTAAAAAAC - >AT5G16770.2
CAAATATTATGATAAGTTTCCACAAGGGCATTTTCGTCATTCTGTGGTCAGCAAAGTCAAAAGCTAAACTAAGATCTTCTCCGTCCGACAAGATACAAAGACACGAAACACAAATGCCCTATTTAATGCAAAGATCACACACACACTTAGCCTCATTCACTAAGATCCTTAATTGGATTGCCTTCATCAGAATCTTTCTCCCTTGAGAGTTCTAGGAGATCTTCAACAGCTAGTAATAATGGGGCGATCACCATGTTGCGATGAGAATGGTCTAAAGAAAGGGCCATGGACACAAGAGGAGGATGATAAACTGATAGATCACATTCAAAAACATGGCCATGGCAGCTGGAGAGCTCTTCCAAAGCAAGCCGGTTTAAACCGATGCGGAAAGAGTTGTAGATTAAGATGGACCAACTACTTGAGACCTGACATCAAGAGAGGAAATTTCACTGAAGAGGAAGAACAAACTATTATCAACCTCCATTCCCTTCTTGGAAACAAGTGGTCGTCGATAGCCGGTAATCTTCCTGGAAGAACGGACAATGAAATAAAAAACTATTGGAACACACATTTGAGAAAGAAACTTCTCCAAATGGGGATTGATCCGGTGACCCATAGGCCAAGAACCGACCATCTAAACGTTTTAGCAGCTCTCCCGCAGCTTATAGCCGCCGCAAATTTCAACAGCCTCTTGAATCTCAACCAAAATGTGCAACTGGATGCAACAACTCTTGCTAAAGCTCAACTGCTACACACTATGATTCAAGTCCTTAGCACCAATAACAACACCACCAATCCTTCTTTTTCTTCATCAACTATGCAAAACAGTAACACCAATCTCTTTGGCCAAGCTTCTTACTTAGAGAACCAAAATCTTTTTGGTCAGTCTCAAAACTTCTCTCACATTCTTGAGGATGAGAATTTGATGGTCAAAACCCAAATTATTGATAACCCTTTGGACTCTTTTTCTTCCCCCATACAACCCGGTTTTCAAGATGATCATAATTCACTCCCTCTATTGGTTCCGGCGTCTCCTGAAGAATCTAAAGAAACTCAAAGGATGATCAAGAACAAAGACATCGTCGATTACCATCATCATGATGCTTCAAACCCTTCATCATCAAACTCAACGTTTACACAAGATCATCATCACCCATGGTGTGACACTATTGATGATGGAGCAAGTGATTCTTTTTGGAAAGAGATAATAGAGTAAGTCCTATCAGTACTCTCCCACATAGATTGAATTTTATAGTTACCACATGAATGCATTCAGTGAATATGGACGATTTGGCTAGTCTAATGTTATAATTCTCCGTTTTGCAGGCAAACTTGTTCGGAACCATGGCCATTTCCTGAATAGACAAGATTGAAAAATGATTAAAGAGAGAGTATATTTATTTTTCTTGTTATTTGTTGTCGATAGAGTTAAAAGCATATTTATTCTTCACTAATCCTTACCGTGTTTTTTTTGTAAGACCATGTGTGTGTGGTAAACATTGATCTTGTACAAACTTGATTACATTACTGTATTAATACAAATATTCGTGTTTGTAATTACTTTCATAAATCTAATTTATCTGCTTTACAAAAAAAATACAAACGTTGATTTCTTTTTGTTTTCAAATATATAAAGTACAAAGACGAACGCAAATATATTCTTCCATTTGATTTCTTATTAAATTAAAAAGTAAATATACTATCTACACGTAAACGCATACGCCAATGCAATAAAAACAATTTGTCTCCTATTAATTATAATCTAGTCAACACGTAAAAAAC - >AT5G16770.1
CAAATATTATGATAAGTTTCCACAAGGGCATTTTCGTCATTCTGTGGTCAGCAAAGTCAAAAGCTAAACTAAGATCTTCTCCGTCCGACAAGATACAAAGACACGAAACACAAATGCCCTATTTAATGCAAAGATCACACACACACTTAGCCTCATTCACTAAGATCCTTAATTGGATTGCCTTCATCAGAATCTTTCTCCCTTGAGAGTTCTAGGAGATCTTCAACAGCTAGTAATAATGGGGCGATCACCATGTTGCGATGAGAATGGTCTAAAGAAAGGGCCATGGACACAAGAGGAGGATGATAAACTGATAGATCACATTCAAAAACATGGCCATGGCAGCTGGAGAGCTCTTCCAAAGCAAGCCGGTTTAAACCGATGCGGAAAGAGTTGTAGATTAAGATGGACCAACTACTTGAGACCTGACATCAAGAGAGGAAATTTCACTGAAGAGGAAGAACAAACTATTATCAACCTCCATTCCCTTCTTGGAAACAAGTGGTCGTCGATAGCCGGTAATCTTCCTGGAAGAACGGACAATGAAATAAAAAACTATTGGAACACACATTTGAGAAAGAAACTTCTCCAAATGGGGATTGATCCGGTGACCCATAGGCCAAGAACCGACCATCTAAACGTTTTAGCAGCTCTCCCGCAGCTTATAGCCGCCGCAAATTTCAACAGCCTCTTGAATCTCAACCAAAATGTGCAACTGGATGCAACAACTCTTGCTAAAGCTCAACTGCTACACACTATGATTCAAGTCCTTAGCACCAATAACAACACCACCAATCCTTCTTTTTCTTCATCAACTATGCAAAACAGTAACACCAATCTCTTTGGCCAAGCTTCTTACTTAGAGAACCAAAATCTTTTTGGTCAGTCTCAAAACTTCTCTCACATTCTTGAGGATGAGAATTTGATGGTCAAAACCCAAATTATTGATAACCCTTTGGACTCTTTTTCTTCCCCCATACAACCCGGTTTTCAAGATGATCATAATTCACTCCCTCTATTGGTTCCGGCGTCTCCTGAAGAATCTAAAGAAACTCAAAGGATGATCAAGAACAAAGACATCGTCGATTACCATCATCATGATGCTTCAAACCCTTCATCATCAAACTCAACGTTTACACAAGATCATCATCACCCATGGTGTGACACTATTGATGATGGAGCAAGTGATTCTTTTTGGAAAGAGATAATAGAGTAAGTCCTATCAGTACTCTCCCACATAGATTGAATTTTATAGTTACCACATGAATGCATTCAGTGAATATGGACGATTTGGCTAGTCTAATGTTATAATTCTCCGTTTTGCAGGCAAACTTGTTCGGAACCATGGCCATTTCCTGAATAGACAAGATTGAAAAATGATTAAAGAGAGAGTATATTTATTTTTCTTGTTATTTGTTGTCGATAGAGTTAAAAGCATATTTATTCTTCACTAATCCTTACCGTGTTTTTTTTGTAAGACCATGTGTGTGTGGTAAACATTGATCTTGTACAAACTTGATTACATTACTGTATTAATACAAATATTCGTGTTTGTAATTACTTTCATAAATCTAATTTATCTGCTTTACAAAAAAAATACAAACGTTGATTTCTTTTTGTTTTCAAATATATAAAGTACAAAGACGAACGCAAATATATTCTTCCATTTGATTTCTTATTAAATTAAAAAGTAAATATACTATCTACACGTAAACGCATACGCCAATGCAATAAAAACAATTTGTCTCCTATTAATTATAATCTAGTCAACACGTAAAAAAC
CDS Sequence
Protein Sequence