Information report for AT5G16690
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005664 — part of — nuclear origin of replication recognition complex
- GO:0006270 — involved in — DNA replication initiation
- GO:0005515 — enables — protein binding
- GO:0031261 — part of — DNA replication preinitiation complex
- GO:0005634 — located in — nucleus
- GO:0005656 — part of — nuclear pre-replicative complex
- GO:0006260 — acts upstream of or within — DNA replication
- GO:0000808 — part of — origin recognition complex
- GO:0003688 — enables — DNA replication origin binding
Functional Keywords
- root , root , shoot system , vascular leaf , flower , stem , plant sperm cell
Literature and News
- Conserved initiator proteins in eukaryotes. DOI: 10.1126/science.270.5242.1667 ; PMID: 7502077
- Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. DOI: 10.1093/nar/gkg138 ; PMID: 12527770
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genetic interaction of an origin recognition complex subunit and the Polycomb group gene MEDEA during seed development. DOI: 10.1105/tpc.019059 ; PMID: 15020747
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- The genes encoding Arabidopsis ORC subunits are E2F targets and the two ORC1 genes are differently expressed in proliferating and endoreplicating cells. DOI: 10.1093/nar/gki854 ; PMID: 16179646
- Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. DOI: 10.1104/pp.107.101105 ; PMID: 17556508
- BICELLULAR POLLEN 1 is a modulator of DNA replication and pollen development in Arabidopsis. DOI: 10.1111/nph.15610 ; PMID: 30484867
- Conserved initiator proteins in eukaryotes. DOI: 10.1126/science.270.5242.1667 ; PMID: 7502077
- The genes encoding Arabidopsis ORC subunits are E2F targets and the two ORC1 genes are differently expressed in proliferating and endoreplicating cells. DOI: 10.1093/nar/gki854 ; PMID: 16179646
Gene Resources
- UniProt: A0A1P8BC82
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BC82
- EnsemblPlants: AT5G16690.2
- Gramene: AT5G16690.2
- ExpressionAtlas: AT5G16690
- InterPro: IPR020795, IPR040855, IPR045667
- PANTHER: PTHR12748, PTHR12748:SF0
- OrthoDB: A0A1P8BC82
- SWISS-MODEL: A0A1P8BC82
- Conserved Domain Database: cd20704
Sequences
cDNA Sequence
- >AT5G16690.2
AAACTTCGTCGTTTTCGATTGCTCCACCAACCGATAATTCTCCCATGGCACCCTCCGGCACCGTCGCCGATCCTCCGCAATGTTCAACCACCGATTCATTCAATTCCAGCGACACAGCAGAGAATGATATTCGGCCATTTTTTGTACTTCACAAGGCTTCGTCTGGTAATCACAATGGGAAATTAACTGGGATTGTGAAAAGCAAGCGGAGGATCGAATCACCTTCACCTAAAATTGCTAAAAGATCTGAGGTCGAAAGCGTGGAAGAGGAAGATGGCCAGTTTTTCTCAACTCTTCGCTTTAAAGTTTTCGAGACTGTCTGGTCGAAAATCGAGAAAACAATTGAAGATGTCCTGAGAAATTCGAACTCTAAAGTATTTAGTGGGATTCATGATTGGATACGGGAATCATTTGAATCGATCATATCATCTGGAGCACTTAAGTTATCGGAAGCAGTTCGATCTTATCCTGTTTTAACTCAAGCTTCTTCTAAGCAATTGCTTACTGCAATGGTTCTCACCAGGAATCTGGAAATGGTTGATGATTTATTGACATTTGAAGAACTGGAGTTGCACTTGAAGTCTCAAGGATGTCATGTGGCTAAGCTTTCATCTATGGACTTCTCAGCCAAGAGTGGTGTAGGAGGTTGCCTTAGAGGTTTGTTACGCCAGTTTGTGATGCCAACCGTAGATGTGGCTGATGTGACCATTCTCGCATCATGGTACAGAGAAAACAAAAACCATGAGAATCCCGTGGTTATAATTGTGGATGATACAGAGAGATGCTGTGGTCCTGTACTGTCGGATTTAATTCTTATATTAAGCGAATGGGCAATCAAAGTTCCAATTTTTCTGATAATGGGTGTGTCCACAGCACATGATGCGCCTAGAAAGATATTATCAGTGAACGCGCTGCAGAGACTTTGTGCTACTAGGTTCACTTTGAGCTCCCCGGCTGAACGGATGGATGCAGTTCTCAAGGCTGTTTTCTTAAAGCCGTGTTCTGGGTTCACTGTTAGCCATAAGGTGGCACTTTTTATGAGAAGTTACTTTTTGTGTCAAGATGGAACACTGACATCTTTTGTTAGAACTCTCAAGATAGCCTGTCTACAACATTTCTCATTAGAGCCTTTAAGCATCATGCTCGAGCACTTTTGTCATGATGGTGTTAATCAGCTGTCAGGTGAAGGCACTGAACTATTGACAGAAGCAACAATGAAACATGCCTTTGACTTGCCATCTGTGACGAGGAATAAAATTACTCGGAGTACATTTGAAATGCTACCTCATTTTTTGTTGGACTTGCAAAGGATGCCAAACCCCTGGAGCATAGTAGTTTTGTGCTTATATGAAGCTGGAAAGTTTGATAAACTTCGATTGCTAGACATATTCTGTGAGATACTTGACCCAGAAGCACGTTACCTGAAATACTTTTCACCTTCGGAAATTGTTAACTCTCAGAGTCACAATTCAGGACGTAATAATGTTATCCGACGGGTTTTGCGCAAGCTCAGGGATCTTTCACCTTCACAGCTGTCTAGCATGTTGAAAAGTTGGGAAAATCTCACTGCGGAGTTCACTGAGATCAATGACAAAGTTATTGAATTGCATCCGTTCATGAGAGCCGTGGAAGCAGCTGGTCAGAGACAAGGACTTCCTAACAGCCCAAAAAAGCATGCATCTCGAAGCAATTCAAAGCTTGAAAAAGAGCTTAAAGCCATGACTGATAAGGTTGCCACAGTCATAGAATTCATGCTAAGGGAATATATGAAGCCAGTTGAGAGTGTTCCTTTCCACGAAATTTTGTGTTTCAAGAATGTCGATAAACTTCAATCTGCTTTACTTGGAGACCCGAGAGGCAGGATCCAATTAGATCTACTGGAATCTCACGATATCCTCCACTGTGTGTGCTGCAGCCAGAGAGGCACAACTCTACTGCCTTCCATGCATGATACATCGATTTTGTATAAACTGGCGCAAGAGCACGCTGATGTCATTAACCTCCATGACTGGTATCAATCTTTCAAGACGATACTTATTCCCCGGAGTAGCAAGGCTAAACAAAAATCTAAGTCATCTTCAAAATCAAAGAAACGGAAGGAAATATGCGAAGAACCAGAAGCACCCGCTGAAGCTTTAATTCAGTATCCTTTTTTGGTTAAGATTAGTAATCGGTGATCCACCAATGTTCATCCTTTTGTATTTGTTCATTTTGCAGGACATTTACATAAATGCAGACGACCAAAATTTCGTAACTTATCATATAATAATTTTGATTCCTTAACATTTGATTCCAACAGAGCTCGATTTTGCAGAGCTGTGATGGAGCTTCAGATAACAGGACTTATTCGCATGCCTTCAAAAAGACGTCCAGATTTTGTGCAAAGAGTGGCTTTTGGTTCTTAAGAATAGTTTCAATACTTTATTCCATTGTAAGTGTACTTTAATCAATATGTGTTCTGTGTTCATAACCTGTTTCCATGAATCTATTCAGAGTCATCCGTTTATAGAGAATAGAACTGGCGTTAAAAAGAAAAAAAAAACACTGAATTATCTTAATATAAACAGAATCGTAAAACTCATCTTTCATGAATC - >AT5G16690.1
AAACTTCGTCGTTTTCGATTGCTCCACCAACCGATAATTCTCCCATGGCACCCTCCGGCACCGTCGCCGATCCTCCGCAATGTTCAACCACCGATTCATTCAATTCCAGCGACACAGCAGAGAATGATATTCGGCCATTTTTTGTACTTCACAAGGCTTCGTCTGGTAATCACAATGGGAAATTAACTGGGATTGTGAAAAGCAAGCGGAGGATCGAATCACCTTCACCTAAAATTGCTAAAAGATCTGAGGTCGAAAGCGTGGAAGAGGAAGATGGCCAGTTTTTCTCAACTCTTCGCTTTAAAGTTTTCGAGACTGTCTGGTCGAAAATCGAGAAAACAATTGAAGATGTCCTGAGAAATTCGAACTCTAAAGTATTTAGTGGGATTCATGATTGGATACGGGAATCATTTGAATCGATCATATCATCTGGAGCACTTAAGTTATCGGAAGCAGTTCGATCTTATCCTGTTTTAACTCAAGCTTCTTCTAAGCAATTGCTTACTGCAATGGTTCTCACCAGGAATCTGGAAATGGTTGATGATTTATTGACATTTGAAGAACTGGAGTTGCACTTGAAGTCTCAAGGATGTCATGTGGCTAAGCTTTCATCTATGGACTTCTCAGCCAAGAGTGGTGTAGGAGGTTGCCTTAGAGGTTTGTTACGCCAGTTTGTGATGCCAACCGTAGATGTGGCTGATGTGACCATTCTCGCATCATGGTACAGAGAAAACAAAAACCATGAGAATCCCGTGGTTATAATTGTGGATGATACAGAGAGATGCTGTGGTCCTGTACTGTCGGATTTAATTCTTATATTAAGCGAATGGGCAATCAAAGTTCCAATTTTTCTGATAATGGGTGTGTCCACAGCACATGATGCGCCTAGAAAGATATTATCAGTGAACGCGCTGCAGAGACTTTGTGCTACTAGGTTCACTTTGAGCTCCCCGGCTGAACGGATGGATGCAGTTCTCAAGGCTGTTTTCTTAAAGCCGTGTTCTGGGTTCACTGTTAGCCATAAGGTGGCACTTTTTATGAGAAGTTACTTTTTGTGTCAAGATGGAACACTGACATCTTTTGTTAGAACTCTCAAGATAGCCTGTCTACAACATTTCTCATTAGAGCCTTTAAGCATCATGCTCGAGCACTTTTGTCATGATGGTGTTAATCAGCTGTCAGGTGAAGGCACTGAACTATTGACAGAAGCAACAATGAAACATGCCTTTGACTTGCCATCTGTGACGAGGAATAAAATTACTCGGAGTACATTTGAAATGCTACCTCATTTTTTGTTGGACTTGCAAAGGATGCCAAACCCCTGGAGCATAGTAGTTTTGTGCTTATATGAAGCTGGAAAGTTTGATAAACTTCGATTGCTAGACATATTCTGTGAGATACTTGACCCAGAAGCACGTTACCTGAAATACTTTTCACCTTCGGAAATTGTTAACTCTCAGAGTCACAATTCAGGACGTAATAATGTTATCCGACGGGTTTTGCGCAAGCTCAGGGATCTTTCACCTTCACAGCTGTCTAGCATGTTGAAAAGTTGGGAAAATCTCACTGCGGAGTTCACTGAGATCAATGACAAAGTTATTGAATTGCATCCGTTCATGAGAGCCGTGGAAGCAGCTGGTCAGAGACAAGGACTTCCTAACAGCCCAAAAAAGCATGCATCTCGAAGCAATTCAAAGCTTGAAAAAGAGCTTAAAGCCATGACTGATAAGGTTGCCACAGTCATAGAATTCATGCTAAGGGAATATATGAAGCCAGTTGAGAGTGTTCCTTTCCACGAAATTTTGTGTTTCAAGAATGTCGATAAACTTCAATCTGCTTTACTTGGAGACCCGAGAGGCAGGATCCAATTAGATCTACTGGAATCTCACGATATCCTCCACTGTGTGTGCTGCAGCCAGAGAGGCACAACTCTACTGCCTTCCATGCATGATACATCGATTTTGTATAAACTGGCGCAAGAGCACGCTGATGTCATTAACCTCCATGACTGGTATCAATCTTTCAAGACGATACTTATTCCCCGGAGTAGCAAGGCTAAACAAAAATCTAAGTCATCTTCAAAATCAAAGAAACGGAAGGAAATATGCGAAGAACCAGAAGCACCCGCTGAAGCTTTAATTCAGTATCCTTTTTTGGTTAAGATTAGTAATCGGTGATCCACCAATGTTCATCCTTTTGTATTTGTTCATTTTGCAGGACATTTACATAAATGCAGACGACCAAAATTTCGTAACTTATCATATAATAATTTTGATTCCTTAACATTTGATTCCAACAGAGCTCGATTTTGCAGAGCTGTGATGGAGCTTCAGATAACAGGACTTATTCGCATGCCTTCAAAAAGACGTCCAGATTTTGTGCAAAGAGTGGCTTTTGGTTCTTAAGAATAGTTTCAATACTTTATTCCATTGTAAGTGTACTTTAATCAATATGTGTTCTGTGTTCATAACCTGTTTCCATGAATCTATTCAGAGTCATCCGTTTATAGAGAATAGAACTGGCGTTAAAAAGAAAAAAAAAACACTGAATTATCTTAATATAAACAGAATCGTAAAACTCATCTTTCATGAATC
CDS Sequence
Protein Sequence