Gene Details:
- Gene ID: AT5G16630
- Gene Symbol: ATRAD4, RAD4
- Gene Name:
- Description: DNA repair protein Rad4 family;(source:Araport11)
- TAIR Accession: locus:2174160
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0006289 — involved in — nucleotide-excision repair
- GO:0005634 — located in — nucleus
- GO:0003697 — enables — single-stranded DNA binding
- GO:0006298 — involved in — mismatch repair
- GO:0000111 — part of — nucleotide-excision repair factor 2 complex
- GO:0003684 — enables — damaged DNA binding
- GO:0071942 — part of — XPC complex
- GO:0005737 — is active in — cytoplasm
Function-related keywords:
Literature:
- CENTRIN2 modulates homologous recombination and nucleotide excision repair in Arabidopsis. DOI: 10.1105/tpc.021378 ; PMID: 15155891
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- RAD4 and RAD23/HMR Contribute to Arabidopsis UV Tolerance. DOI: 10.3390/genes9010008 ; PMID: 29283431
- RAD7 homologues contribute to Arabidopsis UV tolerance. DOI: 10.1016/j.plantsci.2018.09.017 ; PMID: 30466592
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT5G16630.3
CTCGCAAATTTTAAATAGTTGTGATTTATTTTGGAATTTTACCTTATTTTTAATATCCAAAAGGAGAAGTGACGTGGCGATATCGAAGCGGTTTAATGAAGTGATGGCCCCATCTTAAAGAAATCAATGACCCTTATCGTTCCACTTCTATCGGAGTCGGAGTTTTTTTTTGTTGTTGTTGTATTCCGTACGTCGGTCGTTGTCGGGAGAATTGGCGCGTGAAATCCTTGGCTCCGTCGAATACGTCTGCCTCCGACGGCTGTGAGTCGCATGATTGAGTCGTGGGTTTCTCTTGATGAAGTCTAGAAGTGAAAGTAAGAATTGTAGGCTTGCACAAGCCTCTAGAGTAGCAGTCAACAAAGTTCTAGACAAAAGCAGCGCCCGTGGCTCTCGAGGCAAGAAGAAGCAAGATGATAACTGTGATTCCGCTAAGCGGGATAAAGGCGTAAACGGTAAGGGAAAGCAAGCGCTCGACGCAAGATTGATTGATAACGTTCTAGAGGACAGGGGATGTGGTAATGTTGATGATGATGAAATGAATGATTCAGACTGGGAAGACTGTCCAATCCCTAGTCTTGATAGTACGGTTGATGATAATAATGTTGATGACACCAGAGAGCTAACCATAGAATTTGATGATGATGTTCCTGATGCTAAGAAGCAGAAGAATGCATACCGTGCAACAGCAGAAGACAAGGTACGGGCGGAACTTGTCCATAAGGTGCACTTGCTCTGTCTGCTTGCAAGAGGGAGGATAGTTGACAGTGCTTGTAATGATCCCTTGATTCAGGCTGCCTTGCTTTCACTTCTACCATCATACTTGACAAAAGTATCAAATCTCGAGAAAGTTACTGTCAAGGATATAGCCCCTCTTCTTCGTTGGGTTCGTGAAAACTTTTCTGTTAGTTGTTCTCCCAGTTCTGAGAAATCTTTTCGTACATCCCTAGCATTTGCTCTTGAATCTCGTAAAGGCACAGCGGAAGAGCTTGCAGCACTGGCTGTTGCTTTGCTTAGAGCATTAAAGCTCACAACCCGGTTTGTGTCTATTCTTGATGTTGCATCCTTAAAACCTGGGGCCGATAGGAATGAATCATCAGGTCAAAACAGAGCTAAAATGAAGCATGGGATATTCAGGACGTCAACACTTATGGTACCAAAACAGCAGGCCATCTCGTCATACCCGAAGAAATCTTCCTCCCATGTTAAGAATAAAAGTCCCTTTGAAAAGCCTCAGCTTGGGAATCCCCTGGGCTCTGATCAGGTACAAGACAATGCAGTCAATTCATCTTGTGAAGCAGGAATGTCCATAAAATCTGACGGAACAAGGAGGAAAGGAGATGTTGAGTTCGAGAGGCAAATAGCCATGGCTTTGTCTGCAACTGCAGACAACCAACAGAGCTCTCAAGTGAACAATACGAAGAAAGTTCGTGAAATAACAAAAATAAGTAATAGCTCGTCAGTTTCTGACCAAGTAATATCCACGGCTTTCGGTTCTAAGAAAGTAGATTCTCCCCTTTGTTGGCTTGAGGTGTATTGCAATGGGGAAAACATGGATGGGAAATGGGTCCATGTCGATGCTGTTAATGGAATGATAGATGCAGAGCAAAACATTGAAGCAGCAGCTGCCGCATGCAAAACCGTTCTCAGATATGTTGTTGCATTTGCTGCTGGTGGAGCTAAAGATGTCACTCGCAGGTACTGTACAAAGTGGCACACTATTTCATCCAAACGGGTGTCTTCAGTGTGGTGGGATATGGTATTAGCACCGTTAGTACATCTCGAGTCAGGTGCAACTCACGATGAAGACATTGCTCTGAGAAATTTCAATGGCCTAAATCCTGTTTCTAGTAGAGCTTCCTCGAGTAGCTCGTCGTTTGGTATAAGGAGTGCTCTTGAAGATATGGAGTTGGCTACACGGGCGCTGACTGAGTCTCTTCCTACTAACCAGCAGGCTTATAAAAGTCATGAAATATATGCTATTGAGAAATGGCTTCACAAGAACCAGATACTTCACCCAAAAGGTCCAGTTCTGGGATTTTGCTCTGGTCATCCAGTATATCCTCGAACCTGTGTGCAGACTCTTAAAACAAAAGAAAGATGGCTTCGTGATGGGCTACAACTTAAGGCGAATGAAGTTCCCTCAAAGGTTTCCGTGTTTTATTCTCTCCCTGATGATTATCTTAGTCGTTCCCCTTTTTTTTCGGTTTGATGATCAACTCTTGAAGTCCATTATTACCTTAGATTCTTAAGCGAAACTCGAAGTTCAAGAAAGTAAAAGATTTTGAAGATGGCGACAACAACATTAAAGGTGGTTCTTCTTGCATGGAACTATATGGGAAGTGGCAAATGGAACCATTGTGTCTCCCTCCCGCTGTTAATGGAATTGTGCCCAAGAACGAGCGCGGTCAAGTTGATGTCTGGTCTGAGAAATGTCTCCCACCTGGAACAGTCCACTTAAGGTTTCCTCGAATATTTGCGGTTGCTAAGAGATTCGGTATAGATTATGCACCTGCCATGGTTGGTTTCGAGTACAGAAGTGGAGGTGCTACTCCTATTTTTGAAGGTATTGTGGTCTGTACCGAGTTCAAAGACACAATCCTCGAGGCATATGCAGAAGAACAAGAAAAGAAAGAAGAAGAGGAGAGAAGAAGAAATGAGGCACAAGCAGCTTCGAGATGGTATCAGCTTCTTTCGTCTATCTTAACCCGTGAAAGATTGAAAAACCGTTACGCTAATAACTCTAACGATGTCGAAGCCAAGAGTTTGGAAGTGAATTCAGAAACAGTCGTTAAGGCAAAGAATGTGAAAGCACCTGAAAAGCAGAGAGTGGCTAAGAGAGGAGAAAAGTCACGAGTAAGAAAGTCTCGTAATGAAGATGAAAGTCATGAACATGTGTTTCTTGATGAGGAAGAAACCTTTGATGAGGAAACCTCTGTGAAAACGAAACGCTGCAAATGTGGCTTCTCTGTCGAAGTTGAACAAATGTAGTTTTGACTTCGTTTACTGGCCCTAGGAGTCTAGCTAGGAGTTTCATTTGTTTAGAAAATGATTTTACATAAAATTAGGGTGATCTATCTATTATTCCACCGAAAATTTTGATTTTAAGTCTTAACCACAGAGTTTGACCTTGTTTAAGGAACTACTTAAAACAAAGCTTGCCAAGTTTGAAGGAAA - >AT5G16630.2
CTCGCAAATTTTAAATAGTTGTGATTTATTTTGGAATTTTACCTTATTTTTAATATCCAAAAGGAGAAGTGACGTGGCGATATCGAAGCGGTTTAATGAAGTGATGGCCCCATCTTAAAGAAATCAATGACCCTTATCGTTCCACTTCTATCGGAGTCGGAGTTTTTTTTTGTTGTTGTTGTATTCCGTACGTCGGTCGTTGTCGGGAGAATTGGCGCGTGAAATCCTTGGCTCCGTCGAATACGTCTGCCTCCGACGGCTGTGAGTCGCATGATTGAGTCGTGGGTTTCTCTTGATGAAGTCTAGAAGTGAAAGTAAGAATTGTAGGCTTGCACAAGCCTCTAGAGTAGCAGTCAACAAAGTTCTAGACAAAAGCAGCGCCCGTGGCTCTCGAGGCAAGAAGAAGCAAGATGATAACTGTGATTCCGCTAAGCGGGATAAAGGCGTAAACGGTAAGGGAAAGCAAGCGCTCGACGCAAGATTGATTGATAACGTTCTAGAGGACAGGGGATGTGGTAATGTTGATGATGATGAAATGAATGATTCAGACTGGGAAGACTGTCCAATCCCTAGTCTTGATAGTACGGTTGATGATAATAATGTTGATGACACCAGAGAGCTAACCATAGAATTTGATGATGATGTTCCTGATGCTAAGAAGCAGAAGAATGCATACCGTGCAACAGCAGAAGACAAGGTACGGGCGGAACTTGTCCATAAGGTGCACTTGCTCTGTCTGCTTGCAAGAGGGAGGATAGTTGACAGTGCTTGTAATGATCCCTTGATTCAGGCTGCCTTGCTTTCACTTCTACCATCATACTTGACAAAAGTATCAAATCTCGAGAAAGTTACTGTCAAGGATATAGCCCCTCTTCTTCGTTGGGTTCGTGAAAACTTTTCTGTTAGTTGTTCTCCCAGTTCTGAGAAATCTTTTCGTACATCCCTAGCATTTGCTCTTGAATCTCGTAAAGGCACAGCGGAAGAGCTTGCAGCACTGGCTGTTGCTTTGCTTAGAGCATTAAAGCTCACAACCCGGTTTGTGTCTATTCTTGATGTTGCATCCTTAAAACCTGGGGCCGATAGGAATGAATCATCAGGTCAAAACAGAGCTAAAATGAAGCATGGGATATTCAGGACGTCAACACTTATGGTACCAAAACAGCAGGCCATCTCGTCATACCCGAAGAAATCTTCCTCCCATGTTAAGAATAAAAGTCCCTTTGAAAAGCCTCAGCTTGGGAATCCCCTGGGCTCTGATCAGGTACAAGACAATGCAGTCAATTCATCTTGTGAAGCAGGAATGTCCATAAAATCTGACGGAACAAGGAGGAAAGGAGATGTTGAGTTCGAGAGGCAAATAGCCATGGCTTTGTCTGCAACTGCAGACAACCAACAGAGCTCTCAAGTGAACAATACGAAGAAAGTTCGTGAAATAACAAAAATAAGTAATAGCTCGTCAGTTTCTGACCAAGTAATATCCACGGCTTTCGGTTCTAAGAAAGTAGATTCTCCCCTTTGTTGGCTTGAGGTGTATTGCAATGGGGAAAACATGGATGGGAAATGGGTCCATGTCGATGCTGTTAATGGAATGATAGATGCAGAGCAAAACATTGAAGCAGCAGCTGCCGCATGCAAAACCGTTCTCAGATATGTTGTTGCATTTGCTGCTGGTGGAGCTAAAGATGTCACTCGCAGGTACTGTACAAAGTGGCACACTATTTCATCCAAACGGGTGTCTTCAGTGTGGTGGGATATGGTATTAGCACCGTTAGTACATCTCGAGTCAGGTGCAACTCACGATGAAGACATTGCTCTGAGAAATTTCAATGGCCTAAATCCTGTTTCTAGTAGAGCTTCCTCGAGTAGCTCGTCGTTTGGTATAAGGAGTGCTCTTGAAGATATGGAGTTGGCTACACGGGCGCTGACTGAGTCTCTTCCTACTAACCAGCAGGCTTATAAAAGTCATGAAATATATGCTATTGAGAAATGGCTTCACAAGAACCAGATACTTCACCCAAAAGGTCCAGTTCTGGGATTTTGCTCTGGTCATCCAGTATATCCTCGAACCTGTGTGCAGACTCTTAAAACAAAAGAAAGATGGCTTCGTGATGGGCTACAACTTAAGGCGAATGAAGTTCCCTCAAAGGTTTCCGTGTTTTATTCTCTCCCTGATGATTATCTTAGTCGTTCCCCTTTTTTTTCGGTTTGATGATCAACTCTTGAAGTCCATTATTACCTTAGATTCTTAAGCGAAACTCGAAGTTCAAGAAAGTAAAAGATTTTGAAGATGGCGACAACAACATTAAAGGTGGTTCTTCTTGCATGGAACTATATGGGAAGTGGCAAATGGAACCATTGTGTCTCCCTCCCGCTGTTAATGGAATTGTGCCCAAGAACGAGCGCGGTCAAGTTGATGTCTGGTCTGAGAAATGTCTCCCACCTGGAACAGTCCACTTAAGGTTTCCTCGAATATTTGCGGTTGCTAAGAGATTCGGTATAGATTATGCACCTGCCATGGTTGGTTTCGAGTACAGAAGTGGAGGTGCTACTCCTATTTTTGAAGGTATTGTGGTCTGTACCGAGTTCAAAGACACAATCCTCGAGGCATATGCAGAAGAACAAGAAAAGAAAGAAGAAGAGGAGAGAAGAAGAAATGAGGCACAAGCAGCTTCGAGATGGTATCAGCTTCTTTCGTCTATCTTAACCCGTGAAAGATTGAAAAACCGTTACGCTAATAACTCTAACGATGTCGAAGCCAAGAGTTTGGAAGTGAATTCAGAAACAGTCGTTAAGGCAAAGAATGTGAAAGCACCTGAAAAGCAGAGAGTGGCTAAGAGAGGAGAAAAGTCACGAGTAAGAAAGTCTCGTAATGAAGATGAAAGTCATGAACATGTGTTTCTTGATGAGGAAGAAACCTTTGATGAGGAAACCTCTGTGAAAACGAAACGCTGCAAATGTGGCTTCTCTGTCGAAGTTGAACAAATGTAGTTTTGACTTCGTTTACTGGCCCTAGGAGTCTAGCTAGGAGTTTCATTTGTTTAGAAAATGATTTTACATAAAATTAGGGTGATCTATCTATTATTCCACCGAAAATTTTGATTTTAAGTCTTAACCACAGAGTTTGACCTTGTTTAAGGAACTACTTAAAACAAAGCTTGCCAAGTTTGAAGGAAA - >AT5G16630.1
CTCGCAAATTTTAAATAGTTGTGATTTATTTTGGAATTTTACCTTATTTTTAATATCCAAAAGGAGAAGTGACGTGGCGATATCGAAGCGGTTTAATGAAGTGATGGCCCCATCTTAAAGAAATCAATGACCCTTATCGTTCCACTTCTATCGGAGTCGGAGTTTTTTTTTGTTGTTGTTGTATTCCGTACGTCGGTCGTTGTCGGGAGAATTGGCGCGTGAAATCCTTGGCTCCGTCGAATACGTCTGCCTCCGACGGCTGTGAGTCGCATGATTGAGTCGTGGGTTTCTCTTGATGAAGTCTAGAAGTGAAAGTAAGAATTGTAGGCTTGCACAAGCCTCTAGAGTAGCAGTCAACAAAGTTCTAGACAAAAGCAGCGCCCGTGGCTCTCGAGGCAAGAAGAAGCAAGATGATAACTGTGATTCCGCTAAGCGGGATAAAGGCGTAAACGGTAAGGGAAAGCAAGCGCTCGACGCAAGATTGATTGATAACGTTCTAGAGGACAGGGGATGTGGTAATGTTGATGATGATGAAATGAATGATTCAGACTGGGAAGACTGTCCAATCCCTAGTCTTGATAGTACGGTTGATGATAATAATGTTGATGACACCAGAGAGCTAACCATAGAATTTGATGATGATGTTCCTGATGCTAAGAAGCAGAAGAATGCATACCGTGCAACAGCAGAAGACAAGGTACGGGCGGAACTTGTCCATAAGGTGCACTTGCTCTGTCTGCTTGCAAGAGGGAGGATAGTTGACAGTGCTTGTAATGATCCCTTGATTCAGGCTGCCTTGCTTTCACTTCTACCATCATACTTGACAAAAGTATCAAATCTCGAGAAAGTTACTGTCAAGGATATAGCCCCTCTTCTTCGTTGGGTTCGTGAAAACTTTTCTGTTAGTTGTTCTCCCAGTTCTGAGAAATCTTTTCGTACATCCCTAGCATTTGCTCTTGAATCTCGTAAAGGCACAGCGGAAGAGCTTGCAGCACTGGCTGTTGCTTTGCTTAGAGCATTAAAGCTCACAACCCGGTTTGTGTCTATTCTTGATGTTGCATCCTTAAAACCTGGGGCCGATAGGAATGAATCATCAGGTCAAAACAGAGCTAAAATGAAGCATGGGATATTCAGGACGTCAACACTTATGGTACCAAAACAGCAGGCCATCTCGTCATACCCGAAGAAATCTTCCTCCCATGTTAAGAATAAAAGTCCCTTTGAAAAGCCTCAGCTTGGGAATCCCCTGGGCTCTGATCAGGTACAAGACAATGCAGTCAATTCATCTTGTGAAGCAGGAATGTCCATAAAATCTGACGGAACAAGGAGGAAAGGAGATGTTGAGTTCGAGAGGCAAATAGCCATGGCTTTGTCTGCAACTGCAGACAACCAACAGAGCTCTCAAGTGAACAATACGAAGAAAGTTCGTGAAATAACAAAAATAAGTAATAGCTCGTCAGTTTCTGACCAAGTAATATCCACGGCTTTCGGTTCTAAGAAAGTAGATTCTCCCCTTTGTTGGCTTGAGGTGTATTGCAATGGGGAAAACATGGATGGGAAATGGGTCCATGTCGATGCTGTTAATGGAATGATAGATGCAGAGCAAAACATTGAAGCAGCAGCTGCCGCATGCAAAACCGTTCTCAGATATGTTGTTGCATTTGCTGCTGGTGGAGCTAAAGATGTCACTCGCAGGTACTGTACAAAGTGGCACACTATTTCATCCAAACGGGTGTCTTCAGTGTGGTGGGATATGGTATTAGCACCGTTAGTACATCTCGAGTCAGGTGCAACTCACGATGAAGACATTGCTCTGAGAAATTTCAATGGCCTAAATCCTGTTTCTAGTAGAGCTTCCTCGAGTAGCTCGTCGTTTGGTATAAGGAGTGCTCTTGAAGATATGGAGTTGGCTACACGGGCGCTGACTGAGTCTCTTCCTACTAACCAGCAGGCTTATAAAAGTCATGAAATATATGCTATTGAGAAATGGCTTCACAAGAACCAGATACTTCACCCAAAAGGTCCAGTTCTGGGATTTTGCTCTGGTCATCCAGTATATCCTCGAACCTGTGTGCAGACTCTTAAAACAAAAGAAAGATGGCTTCGTGATGGGCTACAACTTAAGGCGAATGAAGTTCCCTCAAAGGTTTCCGTGTTTTATTCTCTCCCTGATGATTATCTTAGTCGTTCCCCTTTTTTTTCGGTTTGATGATCAACTCTTGAAGTCCATTATTACCTTAGATTCTTAAGCGAAACTCGAAGTTCAAGAAAGTAAAAGATTTTGAAGATGGCGACAACAACATTAAAGGTGGTTCTTCTTGCATGGAACTATATGGGAAGTGGCAAATGGAACCATTGTGTCTCCCTCCCGCTGTTAATGGAATTGTGCCCAAGAACGAGCGCGGTCAAGTTGATGTCTGGTCTGAGAAATGTCTCCCACCTGGAACAGTCCACTTAAGGTTTCCTCGAATATTTGCGGTTGCTAAGAGATTCGGTATAGATTATGCACCTGCCATGGTTGGTTTCGAGTACAGAAGTGGAGGTGCTACTCCTATTTTTGAAGGTATTGTGGTCTGTACCGAGTTCAAAGACACAATCCTCGAGGCATATGCAGAAGAACAAGAAAAGAAAGAAGAAGAGGAGAGAAGAAGAAATGAGGCACAAGCAGCTTCGAGATGGTATCAGCTTCTTTCGTCTATCTTAACCCGTGAAAGATTGAAAAACCGTTACGCTAATAACTCTAACGATGTCGAAGCCAAGAGTTTGGAAGTGAATTCAGAAACAGTCGTTAAGGCAAAGAATGTGAAAGCACCTGAAAAGCAGAGAGTGGCTAAGAGAGGAGAAAAGTCACGAGTAAGAAAGTCTCGTAATGAAGATGAAAGTCATGAACATGTGTTTCTTGATGAGGAAGAAACCTTTGATGAGGAAACCTCTGTGAAAACGAAACGCTGCAAATGTGGCTTCTCTGTCGAAGTTGAACAAATGTAGTTTTGACTTCGTTTACTGGCCCTAGGAGTCTAGCTAGGAGTTTCATTTGTTTAGAAAATGATTTTACATAAAATTAGGGTGATCTATCTATTATTCCACCGAAAATTTTGATTTTAAGTCTTAACCACAGAGTTTGACCTTGTTTAAGGAACTACTTAAAACAAAGCTTGCCAAGTTTGAAGGAAA
CDS Sequence
Protein Sequence