Gene Details:

• Gene ID: AT5G16600
• Gene Symbol: AtMYB43, MYB43
• Gene Name: myb domain protein 43, myb domain protein 43
• Description: myb domain protein 43;(source:Araport11)
• TAIR Accession: locus:2174195
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G16600.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0005634  — located in — nucleus
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0045893  — acts upstream of or within — positive regulation of DNA-templated transcription
• GO:1901141  — acts upstream of or within — regulation of lignin biosynthetic process
• GO:0009094  — acts upstream of or within — L-phenylalanine biosynthetic process
• GO:2000652  — acts upstream of or within — regulation of secondary cell wall biogenesis
• GO:2000762  — acts upstream of or within — regulation of phenylpropanoid metabolic process
• GO:0030154  — involved in — cell differentiation
• GO:0005634  — is active in — nucleus

Germplasm Phenotype:

• myb20/42/43/85  — semidwarf
• myb20/42/43/85  — shorter siliques with compromised fertility

Function-related keywords:

• root

Literature:

• Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana.   DOI:  10.1046/j.1365-313x.1998.00278.x ;  PMID:  9839469
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The R2R3-MYB gene family in Arabidopsis thaliana.   DOI:  10.1016/s1369-5266(00)00199-0 ;  PMID:  11597504
• Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics.   DOI:  10.1105/tpc.105.031542 ;  PMID:  15980264
• Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation.   DOI:  10.1111/j.1365-313X.2005.02403.x ;  PMID:  15918878
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• CressExpress: a tool for large-scale mining of expression data from Arabidopsis.   DOI:  10.1104/pp.107.115535 ;  PMID:  18467456
• A battery of transcription factors involved in the regulation of secondary cell wall biosynthesis in Arabidopsis.   DOI:  10.1105/tpc.108.061325 ;  PMID:  18952777
• MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes.   DOI:  10.1093/pcp/pcr185 ;  PMID:  22197883
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• MYB20, MYB42, MYB43, and MYB85 Regulate Phenylalanine and Lignin Biosynthesis during Secondary Cell Wall Formation.   DOI:  10.1104/pp.19.01070 ;  PMID:  31871072
• MYB43 as a novel substrate for CRL4(PRL1) E3 ligases negatively regulates cadmium tolerance through transcriptional inhibition of HMAs in Arabidopsis.   DOI:  10.1111/nph.18020 ;  PMID:  35129221
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics.   DOI:  10.1105/tpc.105.031542 ;  PMID:  15980264
• Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.   DOI:  10.1093/molbev/msj051 ;  PMID:  16280546
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103

Sequences: