Information report for AT5G16390
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- cac1a — embryo defective
Functional Keywords
Literature and News
- Purification and properties of the chloroplastic form of biotin holocarboxylase synthetase from Arabidopsis thaliana overexpressed in Escherichia coli. DOI: 10.1046/j.1432-1327.1998.2580586.x ; PMID: 9874227
- Isolation and characterization of an Arabidopsis biotin carboxylase gene and its promoter. DOI: 10.1023/a:1005881006620 ; PMID: 9349276
- Evidence for multiple forms of biotin holocarboxylase synthetase in pea (Pisum sativum) and in Arabidopsis thaliana: subcellular fractionation studies and isolation of a cDNA clone. DOI: 10.1042/bj3230179 ; PMID: 9173880
- Biotin carboxyl carrier protein and carboxyltransferase subunits of the multi-subunit form of acetyl-CoA carboxylase from Brassica napus: cloning and analysis of expression during oilseed rape embryogenesis. DOI: 10.1042/bj3150103 ; PMID: 8670092
- Coi1-dependent expression of an Arabidopsis vegetative storage protein in flowers and siliques and in response to coronatine or methyl jasmonate. DOI: 10.1104/pp.109.2.567 ; PMID: 7480347
- Biotin carboxyl carrier protein isoforms in Brassicaceae oilseeds. DOI: NA ; PMID: 11171138
- Both antisense and sense expression of biotin carboxyl carrier protein isoform 2 inactivates the plastid acetyl-coenzyme A carboxylase in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.2002.01435.x ; PMID: 12445115
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Chloroplast acetyl-CoA carboxylase activity is 2-oxoglutarate-regulated by interaction of PII with the biotin carboxyl carrier subunit. DOI: 10.1073/pnas.0910097107 ; PMID: 20018655
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Arabidopsis BPM proteins function as substrate adaptors to a cullin3-based E3 ligase to affect fatty acid metabolism in plants. DOI: 10.1105/tpc.112.107292 ; PMID: 23792371
- A Family of Negative Regulators Targets the Committed Step of de Novo Fatty Acid Biosynthesis. DOI: 10.1105/tpc.16.00317 ; PMID: 27559025
- Biotin Attachment Domain-Containing Proteins Irreversibly Inhibit Acetyl CoA Carboxylase. DOI: 10.1104/pp.18.00216 ; PMID: 29626162
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- The BADC and BCCP subunits of chloroplast acetyl-CoA carboxylase sense the pH changes of the light-dark cycle. DOI: 10.1074/jbc.RA120.012877 ; PMID: 32467229
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4KE21
- EMBL: CP002688
- AlphaFoldDB: F4KE21
- EnsemblPlants: AT5G16390.2
- Gramene: AT5G16390.2
- ExpressionAtlas: AT5G16390
- InterPro: IPR000089, IPR001249, IPR011053
- PANTHER: PTHR43416, PTHR43416:SF38
- SUPFAM: SSF51230
- PROSITE: PS50968
- Gene3D: 2.40.50.100
- OrthoDB: F4KE21
- SWISS-MODEL: F4KE21
- Conserved Domain Database: cd06850
Sequences
cDNA Sequence
- >AT5G16390.2
GACATCTTCTCTCTCTCTTTCTGAAGTGAACTGTTGTTGTTGTGCTCTTTGGTTTCATCGAGAGAGAACCTAAACCCGATCTGAACCAATAACAATAAGAAGACGAATGGCGTCTTCGTCGTTCTCAGTCACATCTCCAGCTGCTGCTGCTTCCGTCTATGCAGTCACTCAAACCTCCTCGCACTTCCCAATCCAAAACCGCTCTCGCAGAGTTTCTTTCCGTCTCTCTGCTAAGCCCAAGCTTCGCTTTCTCTCCAAGCCTAGTCGCAGTAGCTACCCTGTGGTGAAAGCACAATCTAACAAGGTTAGTACTGGTGCATCATCAAATGCTGCCAAAGTTGATGGGCCATCATCAGCTGAAGGAAAGGAGAAAAACTCATTGAAGGAGTCGTCTGCTTCTTCTCCTGAATTAGCTACAGAAGAGTCTATTTCTGAGTTCCTTACCCAAGTAACAACTCTTGTCAAGCTTGTGGATTCAAGAGACATTGTTGAGTTGCAGTTGAAACAACTCGACTGTGAACTAGTCATTCGAAAAAAAGAAGCCTTACCTCAACCTCAAGCTCCTGCATCTTATGTTATGATGCAGCAACCAAATCAACCATCTTATGCCCAGCAAATGGCTCCTCCTGCTGCACCTGCTGCTGCCGCACCAGCCCCTTCTACGCCAGCCTCTCTGCCTCCACCATCCCCACCTACTCCAGCCAAATCGTCACTTCCTACTGTTAAAAGCCCCATGGCTGGCACATTCTACCGTAGTCCTGCACCTGGTGAACCACCCTTTATTAAGGTTGGAGACAAAGTGCAGAAGGGGCAAGTTCTATGCATTGTTGAAGCCATGAAGTTAATGAATGAAATAGAGGTGAGTTTCTGAATCATCTGAAAATGGGGTACCATCTGAACCTTTTATCTACCTTAACTACTTCGAATCATCTCTTACTAAATACATACACTAAAAAAATATGTTGTTTCTCTGTTCAATCCCACTTAGTCATCTACTTCATATGATTTGTCAATTATATATGGATGAATACTTGTGCTTAACGTGTGCCATTGATTTAACTCTGAAACTTGAACTTCTTCTCCTCAGTCTGACCATACCGGAACCGTAGTCGATATTGTCGCAGAAGACGGCAAGCCTGTCAGCCTCGACACTCCTCTGTTTGTGGTTCAACCGTAGAATCGGCACCATGAGAAATGGAGAAAAGAAGCTCTACTAAATTCATTCTCTGTGCTTTGGTAATACAAAATTTGCTGAGACTTCTAAAAACGTTTCCCCTTCGCTGTCACTGTTAAAGTCTGTTAGGTTTGTTAGTTTGGTGAGGAAGAATTGAGTTTTCTTTAGTTTCTCTATTCGTTAAAAAAAAAAAGATGAGACATTTTTTTCCATAAGCTCTGTTTTTATTTCTTTCCTATATACACGAACTCTTCTTGTTCTGTTCTATTTGCAAATTATCCAATTTCAGAATACA - >AT5G16390.1
GACATCTTCTCTCTCTCTTTCTGAAGTGAACTGTTGTTGTTGTGCTCTTTGGTTTCATCGAGAGAGAACCTAAACCCGATCTGAACCAATAACAATAAGAAGACGAATGGCGTCTTCGTCGTTCTCAGTCACATCTCCAGCTGCTGCTGCTTCCGTCTATGCAGTCACTCAAACCTCCTCGCACTTCCCAATCCAAAACCGCTCTCGCAGAGTTTCTTTCCGTCTCTCTGCTAAGCCCAAGCTTCGCTTTCTCTCCAAGCCTAGTCGCAGTAGCTACCCTGTGGTGAAAGCACAATCTAACAAGGTTAGTACTGGTGCATCATCAAATGCTGCCAAAGTTGATGGGCCATCATCAGCTGAAGGAAAGGAGAAAAACTCATTGAAGGAGTCGTCTGCTTCTTCTCCTGAATTAGCTACAGAAGAGTCTATTTCTGAGTTCCTTACCCAAGTAACAACTCTTGTCAAGCTTGTGGATTCAAGAGACATTGTTGAGTTGCAGTTGAAACAACTCGACTGTGAACTAGTCATTCGAAAAAAAGAAGCCTTACCTCAACCTCAAGCTCCTGCATCTTATGTTATGATGCAGCAACCAAATCAACCATCTTATGCCCAGCAAATGGCTCCTCCTGCTGCACCTGCTGCTGCCGCACCAGCCCCTTCTACGCCAGCCTCTCTGCCTCCACCATCCCCACCTACTCCAGCCAAATCGTCACTTCCTACTGTTAAAAGCCCCATGGCTGGCACATTCTACCGTAGTCCTGCACCTGGTGAACCACCCTTTATTAAGGTTGGAGACAAAGTGCAGAAGGGGCAAGTTCTATGCATTGTTGAAGCCATGAAGTTAATGAATGAAATAGAGGTGAGTTTCTGAATCATCTGAAAATGGGGTACCATCTGAACCTTTTATCTACCTTAACTACTTCGAATCATCTCTTACTAAATACATACACTAAAAAAATATGTTGTTTCTCTGTTCAATCCCACTTAGTCATCTACTTCATATGATTTGTCAATTATATATGGATGAATACTTGTGCTTAACGTGTGCCATTGATTTAACTCTGAAACTTGAACTTCTTCTCCTCAGTCTGACCATACCGGAACCGTAGTCGATATTGTCGCAGAAGACGGCAAGCCTGTCAGCCTCGACACTCCTCTGTTTGTGGTTCAACCGTAGAATCGGCACCATGAGAAATGGAGAAAAGAAGCTCTACTAAATTCATTCTCTGTGCTTTGGTAATACAAAATTTGCTGAGACTTCTAAAAACGTTTCCCCTTCGCTGTCACTGTTAAAGTCTGTTAGGTTTGTTAGTTTGGTGAGGAAGAATTGAGTTTTCTTTAGTTTCTCTATTCGTTAAAAAAAAAAAGATGAGACATTTTTTTCCATAAGCTCTGTTTTTATTTCTTTCCTATATACACGAACTCTTCTTGTTCTGTTCTATTTGCAAATTATCCAATTTCAGAATACA
CDS Sequence
Protein Sequence