Gene Details:
- Gene ID: AT5G16310
- Gene Symbol: UCH1
- Gene Name:
- Description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Germplasm Phenotype:
- uch1-1 uch2-1 — Accumulated less chlorophyll than wild-type. Smaller and more compact rosettes than wild-type. More lanceolate cauline leaves. Less fertile. Under short day conditions, the double mutant develops a less branched primary inflorescence.
Function-related keywords:
- root , cauline leaf , rosette leaf , fruit , root , flower , stem
Literature:
- Ubiquitin C-terminal hydrolases 1 and 2 affect shoot architecture in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03154.x ; PMID: 17559514
- Evidence that the Arabidopsis Ubiquitin C-terminal Hydrolases 1 and 2 associate with the 26S proteasome and the TREX-2 complex. DOI: 10.4161/psb.21899 ; PMID: 22951400
- Ubiquitin carboxyl-terminal hydrolases are required for period maintenance of the circadian clock at high temperature in Arabidopsis. DOI: 10.1038/s41598-019-53229-8 ; PMID: 31745110
- COMPASS functions as a module of the INO80 chromatin remodeling complex to mediate histone H3K4 methylation in Arabidopsis. DOI: 10.1093/plcell/koab187 ; PMID: 34270751
- Ubiquitin C-terminal hydrolases 1 and 2 affect shoot architecture in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03154.x ; PMID: 17559514
Sequences:
cDNA Sequence
- >AT5G16310.1
ATAGTCTCTCTTTCGAGTCTGCAGCTAGCGTGAAGACGATGAAATCGATGGGAGGAGATAGATAAGCGCGAATTTGAGAGTGAAAATTCTAAATTCAGACCCATTTTCACCGGCGCGAGTCATCGTTGAACCATGTCTTGGCTTCCTGTAGAATCTGATCCTGGTATTTTCACTGAGATTATACAACAAATGCAAGTGAAAGGTGTGCAGGTTGAGGAATTGTATTCCTTGGACTTCAACTCTCTGGATGAAATAAGACCTGTCTATGGATTGATATTGCTTTACAAGTGGCGTCCAGAAGAAAAGGAGAATCGTGTTGTCATCACAGAGCCAAACCCGAATTTCTTCTTTGCAAGCCAGATAATCAACAATGCTTGTGCGACCCAAGCGATATTATCAGTCCTCATGAACTCTTCGAGTATTGATATTGGCTCAGAACTATCAGAACTGAAACAATTCGCCAAAGAATTTCCTCCTGAACTGAAAGGTTTAGCCATCAACAACAATGAGGCAATACGTGCAGCTCACAACACATTTGCCAGGCCTGACCCGTCTTCCATCATGGAAGATGAAGAATTAGCTGCTGCGAAAAATCTAGACGAAGATGATGATGTGTATCATTACATCAGCTACTTACCTGTTGATGGTATCTTATATGAGCTCGATGGTCTTAAAGAAGGACCCATTAGTCTTGGACAGTGTCTGGGTGAGCCAGAAGGAATCGAGTGGCTCAGAATGGTCCAACCTGTGGTACAAGAGCAGATTGACCGGTATTCGCAGAATGAGATTCGGTTTAGTCTCTTAGCTGTAGTTAAGAACAGGAAAGAGATGTATGTAGCTGAACTGAAAGAGTATCAAAGAAAGCGAGAGAGGGTTTTGCAGCAGTTAGGTGCTTTGCAAGCTGATAAATACGCTGAGAAAAGCAGTTACGAGGCTCTTGATAGAGAGCTTTCGGAAGTCAATATCGGGATAGAGACTGTTTCACAAAAGATTGTAATGGAGGAGGAGAAATCTAAGAACTGGAAGAAAGAGAACATGAGAAGGAAACACAACTATGTCCCTTTCCTCTTCAACTTCCTCAAGATTCTTGCTGACAAGAAGAAGCTGAAACCTCTCATTGCTAAGCACCATCCCTAAATCTGCTTTACCGGGATGTTAACTTGATAGAAATCAGATGTTTTAGTGATCTGAATACTGTGGTGGCGTGGTTATATGTAGCCAAACTTTAACTTGATGGAAGTCAGATGTTTTAGCGATCCTTGATTGTAATTGGTCTGAGGATTATGTTGAACCAAATCTTTTTTTTTTACTTAATTACATGTTCC
CDS Sequence
Protein Sequence