Information report for AT5G16230
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Changes in the endoplasmic reticulum lipid properties in response to low temperature in Brassica napus. DOI: 10.1016/j.plaphy.2004.10.001 ; PMID: 15596101
- Genomic structures and characterization of the 5'-flanking regions of acyl carrier protein and Delta4-palmitoyl-ACP desaturase genes from Coriandrum sativum. DOI: 10.1016/j.bbaexp.2005.06.011 ; PMID: 16112758
- Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. DOI: 10.1104/pp.105.067314 ; PMID: 16299181
- The Arabidopsis stearoyl-acyl carrier protein-desaturase family and the contribution of leaf isoforms to oleic acid synthesis. DOI: 10.1007/s11103-006-9086-y ; PMID: 17072561
- Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition. DOI: 10.1111/j.1365-313X.2006.02900.x ; PMID: 17059406
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- ACYL-ACYL CARRIER PROTEIN DESATURASE2 and 3 Are Responsible for Making Omega-7 Fatty Acids in the Arabidopsis Aleurone. DOI: 10.1104/pp.16.00836 ; PMID: 27462083
- Conserved Function of ACYL-ACYL CARRIER PROTEIN DESATURASE 5 on Seed Oil and Oleic Acid Biosynthesis between Arabidopsis thaliana and Brassica napus. DOI: 10.3389/fpls.2017.01319 ; PMID: 28791041
- Differential Activation of Partially Redundant Δ9 Stearoyl-ACP Desaturase Genes Is Critical for Omega-9 Monounsaturated Fatty Acid Biosynthesis During Seed Development in Arabidopsis. DOI: 10.1105/tpc.20.00554 ; PMID: 32958563
- Acyl-CoA desaturase ADS4.2 is involved in the formation of characteristic wax alkenes in young Arabidopsis leaves. DOI: 10.1093/plphys/kiab182 ; PMID: 33890667
Gene Resources
- UniProt: A0A1P8BGU7
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BGU7
- EnsemblPlants: AT5G16230.2
- Gramene: AT5G16230.2
- ExpressionAtlas: AT5G16230
- InterPro: IPR005067, IPR009078, IPR012348
- PANTHER: PTHR31155, PTHR31155:SF18
- SUPFAM: SSF47240
- Gene3D: 1.10.620.20
- OrthoDB: A0A1P8BGU7
- SWISS-MODEL: A0A1P8BGU7
- Conserved Domain Database: cd01050
Sequences
cDNA Sequence
- >AT5G16230.2
ATGGAAAATTGGGCAGAACAAAAACTACTACCTTATCTCAAACCGGTAGAAGATTCATGGCAACCACAAGACTTCTTACCTGCGCCAGAGAACGACGACGAATTCTACGACCGAGTAAAAGAGATCAGAGAAAGAACAAAAGAGATACCTGACGATTACTTTGTAGTTCTTGTGGGAGATATGATCACAGAAGAAGCACTTCCAACGTATCAAACGACGTTAAACACACTAGACGGTGTTAAGGATGAAACCGGTGGGAGTTTATCGCCGTGGGCTGTGTGGATTAGAGCCTGGACGGCGGAGGAAAACCGTCACGGTGACTTACTCAACAAGTATCTTTATCTAACTGGTCGTGTTGATATGCGACATGTTGAGAAGACTATACAATATCTTATTGGTTCTGGTATGGATTCGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCGAGCAACATTCATCTCTCACGGCAACACGGCTAGGCTAGCCACAACATACGGCGATGTTACCCTCGCGAAGATCTGCGGCACAATCGCTGCCGACGAGAAGCGACACGAGACGGCGTACACGAAGATAGTGGAGAAGCTATTCGAGATCGACCCTGACGGATCTGTTCAGGCGTTAGCGAGTATGATGAAGAAACGGATCACAATGCCGGCTCATCTTATGCACGACGGAAGAGATAACGATTTGTTTGATCATTACGCCGCCGTGGCGCAGCGGATTGGAGTTTACACGGCGGCGGATTACGCTGGGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGATTGGGGTTATCAGGAGAAGGAAGGAGAGCACAGGAGTACTTGTGCACCTTGCCGCAGAGGATCAAGAGGTTAGAGGAAAGAGCTAATGATAGGGTCAAACTTGTGTCAAAACCTTCTGTTTCGTTTAGCTGGGTTTTTGGTAGAGATGTGAAACTATAGATAGATATTTAAAATAACAAACAAACAAAAAAAAACCAAACAAATATAAATAAATAAATTATGTTTGTGATCAGGTTGCAAGTTGTCACTTGTGAATGTGAGTAACCAAACTATATAGTATATT - >AT5G16230.1
ATGGAAAATTGGGCAGAACAAAAACTACTACCTTATCTCAAACCGGTAGAAGATTCATGGCAACCACAAGACTTCTTACCTGCGCCAGAGAACGACGACGAATTCTACGACCGAGTAAAAGAGATCAGAGAAAGAACAAAAGAGATACCTGACGATTACTTTGTAGTTCTTGTGGGAGATATGATCACAGAAGAAGCACTTCCAACGTATCAAACGACGTTAAACACACTAGACGGTGTTAAGGATGAAACCGGTGGGAGTTTATCGCCGTGGGCTGTGTGGATTAGAGCCTGGACGGCGGAGGAAAACCGTCACGGTGACTTACTCAACAAGTATCTTTATCTAACTGGTCGTGTTGATATGCGACATGTTGAGAAGACTATACAATATCTTATTGGTTCTGGTATGGATTCGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCGAGCAACATTCATCTCTCACGGCAACACGGCTAGGCTAGCCACAACATACGGCGATGTTACCCTCGCGAAGATCTGCGGCACAATCGCTGCCGACGAGAAGCGACACGAGACGGCGTACACGAAGATAGTGGAGAAGCTATTCGAGATCGACCCTGACGGATCTGTTCAGGCGTTAGCGAGTATGATGAAGAAACGGATCACAATGCCGGCTCATCTTATGCACGACGGAAGAGATAACGATTTGTTTGATCATTACGCCGCCGTGGCGCAGCGGATTGGAGTTTACACGGCGGCGGATTACGCTGGGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGATTGGGGTTATCAGGAGAAGGAAGGAGAGCACAGGAGTACTTGTGCACCTTGCCGCAGAGGATCAAGAGGTTAGAGGAAAGAGCTAATGATAGGGTCAAACTTGTGTCAAAACCTTCTGTTTCGTTTAGCTGGGTTTTTGGTAGAGATGTGAAACTATAGATAGATATTTAAAATAACAAACAAACAAAAAAAAACCAAACAAATATAAATAAATAAATTATGTTTGTGATCAGGTTGCAAGTTGTCACTTGTGAATGTGAGTAACCAAACTATATAGTATATT
CDS Sequence
Protein Sequence