Information report for AT5G15920
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae. DOI: 10.1105/tpc.106.041111 ; PMID: 16617098
- The STRUCTURAL MAINTENANCE OF CHROMOSOMES 5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage in Arabidopsis thaliana. DOI: 10.1105/tpc.108.060525 ; PMID: 19737979
- Putative Arabidopsis homologues of metazoan coiled-coil cytoskeletal proteins. DOI: 10.1042/CBI20100719 ; PMID: 21284606
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- The Arabidopsis CAP-D proteins are required for correct chromatin organisation, growth and fertility. DOI: 10.1007/s00412-013-0424-y ; PMID: 23929493
- Involvement of the Cohesin Cofactor PDS5 (SPO76) During Meiosis and DNA Repair in Arabidopsis thaliana. DOI: 10.3389/fpls.2015.01034 ; PMID: 26648949
- The Transcriptional Coactivator ADA2b Recruits a Structural Maintenance Protein to Double-Strand Breaks during DNA Repair in Plants. DOI: 10.1104/pp.18.00123 ; PMID: 29463775
- The SMC5/6 Complex Subunit NSE4A Is Involved in DNA Damage Repair and Seed Development. DOI: 10.1105/tpc.18.00043 ; PMID: 31036599
- A SWI/SNF subunit regulates chromosomal dissociation of structural maintenance complex 5 during DNA repair in plant cells. DOI: 10.1073/pnas.1900308116 ; PMID: 31285327
- Arabidopsis NSE4 Proteins Act in Somatic Nuclei and Meiosis to Ensure Plant Viability and Fertility. DOI: 10.3389/fpls.2019.00774 ; PMID: 31281325
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- AtNSE1 and AtNSE3 are required for embryo pattern formation and maintenance of cell viability during Arabidopsis embryogenesis. DOI: 10.1093/jxb/erz373 ; PMID: 31408172
- The Role of Structural Maintenance of Chromosomes Complexes in Meiosis and Genome Maintenance: Translating Biomedical and Model Plant Research Into Crop Breeding Opportunities. DOI: 10.3389/fpls.2021.659558 ; PMID: 33868354
- Arabidopsis SMC6A and SMC6B have redundant function in seed and gametophyte development. DOI: 10.1093/jxb/erab181 ; PMID: 33909904
- Defects in meiotic chromosome segregation lead to unreduced male gametes in Arabidopsis SMC5/6 complex mutants. DOI: 10.1093/plcell/koab178 ; PMID: 34240187
- Natural variation identifies SNI1, the SMC5/6 component, as a modifier of meiotic crossover in Arabidopsis. DOI: 10.1073/pnas.2021970118 ; PMID: 34385313
- Structural Maintenance of Chromosomes 5/6 Complex Is Necessary for Tetraploid Genome Stability in Arabidopsis thaliana. DOI: 10.3389/fpls.2021.748252 ; PMID: 34675953
- A diRNA-protein scaffold module mediates SMC5/6 recruitment in plant DNA repair. DOI: 10.1093/plcell/koac191 ; PMID: 35775944
- SMC5/6 complex-mediated SUMOylation stimulates DNA-protein cross-link repair in Arabidopsis. DOI: 10.1093/plcell/koad020 ; PMID: 36705512
- The SMC5/6 complex recruits the PAF1 complex to facilitate DNA double-strand break repair in Arabidopsis. DOI: 10.15252/embj.2022112756 ; PMID: 36815434
Gene Resources
Sequences
cDNA Sequence
- >AT5G15920.1
GGTCGTCGTGCTTCTCTTTTCCCGGGTTTTCGCTTTTTCATGGTTTCACTTTCAGCTCTGCAAACAAACTGAAAAATCGCAATTCAGATAGAGTCTAGGGTTTATCCTCGTATGGTTCAATTCCGCGCTCCATATTTCAATTTCGGCTAAATTCACTTGTTCAGGTTAACTCAGTAAAAATCTCTGAACCGCTGAGAAACGACAAAGATGTCTGAACGTCGTGCTAAGCGTCCTAAAATCTCCAGAGGAGAAGATGACTTTTTGCCTGGGAATATAATCGAAATCGAGCTTCACAACTTCATGACATTCAATCACTTGGTATGCAAACCTGGATCACGTTTGAACCTTGTTATTGGACCTAACGGATCAGGTAAGAGTTCTCTTGTCTGTGCCATTGCACTCTGTCTTGGTGGTGAGCCTCAGCTTCTTGGGAGAGCTACTAGTGTTGGAGCATATGTTAAGCGTGGGGAAGATTCTGGCTATGTCAAGATCTCTTTGAGAGGTAACACCAGGGAAGAAAATCTTACGATTTTTCGTAAGATCGATACACGTAACAAGTCTGAGTGGATGTTTAATGGAAGCACAGTTAGTAAGAAAGATATTGTGGAGATAATACAGAAATTCAACATTCAAGTTAACAATCTCACGCAGTTCCTGCCACAAGATAGGGTTTGCGAGTTTGCCAAGTTAACTCCTGTGCAACTCCTGGAGGAGACGGAAAAAGCTGTTGGGGATCCTCAACTGCCAGTCCATCATCGCGCGCTAGTTGAGAAAAGCCGTGATCTGAAGCAGCTTGAGAGAGCTGTGGCGAAAAATGGAGAGACGCTGAATCAGCTTAAAGCTCTTGTTGATGAGCAAGAGAAGGACGTGGAGCGTGTTAGGCAGAGAGAGTTGTTTTTGACTAAGGTTGATTCCATGAAGAAGAAATTGCCATGGCTAAAGTATGATATGAAAAAAGCTGAGTACATGGATGCTAAGAAGAGAATGAAGGAAGCCGAGAAAAAATTGGATGAAGCTGCAAAGAATTTGAACAGCATGAAGGAACCTATAGAAAAGCAAAAGAAGGAGAAAGCAGAGACAGATTCAAAATGCAAAAAAGTTAAGAATCTCATGGATGCAAATGGAAGAAACCGTTGTCACTTGCTCGAGAAAGAAGATGAGGCAGACGCACGTGTAGTGGCAACGTACAAAGAACTGGAGGAATTGAAGAAACAAGAAGAGCATCGTCAAGAAAGGATTCTGAAAGCTACTGAGGATCTCGTTGCTGCGGAACGGGAACTCCAAAACCTGCCTGTATACGAACGTCCTGTAGCCAAACTTGAAGAATTGAGCTCTCAGGTTACAGAGCTGCATCATAGCATTAACGGAAAGAAGAATCAGAAGGAGGACAACGAGAAGCTTTTGTCTCAGAAGAGATACACCCTGAGGCAATGCGTAGATAAGTTAAAGGACATGGAGAATGCAAATAACAAACTCTTGAAAGCGTTAGCTAACTCTGGAGCTGATAGGATATTTGACGCATATCAATGGGTGCAACAGAATCGTCATGAGTTTAAAAGGGAAGTATATGGTCCTGTTTTGGTGGAGGTTAACGTTCCAAATCGAGAGAACGCTTGCTTTTTGGAGGGTCATGTTTCTTTTTATATCTGGAAGTCTTTTATCACTCAGGATCCGGAGGACCGTGATTTGCTGGTTAAAAATTTAAAACGATTTGATGTTCCTGTTCTAAACTATGTGGGCAATAGCGGCAATCAAAAGGCTCCCTTTCATATTTCTGATCAGATGCGTTCTCTTGGGATCCATGCTCGGCTTGATCAAATATTTGATGCTCCTGATGCCGTCAAGGAGGTTTTAAATTCCCAGTTTGGTCTGGAGGACTCGTACATTGGATCAAAGATTACCGATCAGAGGGCTGAAGAAGTCTATAAGTTGGGTATTAAAGATTTTTGGACCCCAGACAATCACTACCGGTGGTCTTCCTCAAGATATGGTGGTCATTCCTCTGCAAGTGTAGATTCTGTATATCAATCACGTCTTCTATTATGTGGGGTGGACGTTGGAGAGCTTGAGAAACTGAGATCAAGAAAGGAGGAATTAGAAGACTCTATTTTATTCATGGAGGAAACTCACAAGAGTCTTCAAACAGAGCAAAGACGTTTGGAAGAAGAAGCAGCTAAACTTCATAAAGAGAGGGAGGAGATTGTAAATGTTTCGTATCTGGAGAAGAAAAAACGCCGTGAGTTGGAATCCCGTTACCAGCAAAGGAAGACAAAGCTGGAATCTTTAGAGCAAGAGGAGGACATGGATGCTTCAGTTGCTAAGCTGATTGATCAGGCTTCCAGAGCTAACGCTGACCGCTATACATATGCAATCAATCTCAAGAAATTACTTGTGGAGGCTGTTGCTCATAAGTGGAGTTACGCCGAGAAGCATATGGCTTCTATAGAATTGGAAAGAAAGATCAGAGAGTCGGAAATCAATATCAAACAATATGAGAAAACGGCACAACAGCTATCTCTCGCCGTTGAGTATTGTAAGAAAGAGGTAGAAGGAAAGCAGCAGCGGCTAGCAACTGCCAAGAGGGATGCAGAATCTGTTGCAACCATCACACCTGAACTTAAAAAGGAGTTTATGGAGATGCCTACCACAGTCGAAGAATTGGAAGCGGCTATACAAGACAATCTGTCTCAAGCCAATTCGATCCTTTTCATAAACGAGAACATTCTCCAAGAGTATGAACATCGCCAAAGTCAGATATATACCATTTCTACGAAGCTCGAAACTGATAAAAGAGATCTGAGCATATGCATGAAAGAAATCGATTCGCTAAAGGAGAAATGGCTTCCAACGTTGAGACAGCTTGTTGGTCAGATAAATGAAACATTCAGCCACAACTTCCAAGAAATGGCTGTTGCAGGAGAAGTTTCATTGGATGAACGTGACACTGACTTTGATCAATACGGAATACATATCAAAGTGAAATTCAGAGAATCTGGGCAACTTCAGGTTCTAAGCTCTCACCACCAATCTGGAGGAGAGCGTTCTGTCTCAACTATCCTTTACCTCGTCTCTCTTCAAGATCTGACAAACTGTCCTTTCAGGGTTGTTGATGAGATTAATCAAGGTATGGATCCCATAAATGAAAGGAAGATGTTTCAACAATTGGTTAGAGCTGCTAGTCAACCAAACACACCACAGTGCTTCTTACTGACCCCAAAACTCTTACCGGAGCTAGAATACAGTGAAGCCTGTAGCATTCTGAACATCATGAACGGTCCTTATATCGCGGAGCCTTCAAAAGTTTGGAGCTTAGGTGATAGTTGGGGCAGTCTCAATAGACGGAGAACCGAAGCTAGTCAATGTTCCTAACTTGATCATCTTTTCTGTTTTGGGTTTTCGAAGAACAATGTATTTTATGCTATTAAACCGACCGGTCAGAGCAGATTGAACCTGAACCGATTTCGTTTTTATGGTTTGCAAATGTAAAAAGTTCAATGGATAAAGTTT
CDS Sequence
Protein Sequence