Gene Details:

• Gene ID: AT5G15630
• Gene Symbol: AtCOBL4, COBL4, IRX6
• Gene Name: COBRA-LIKE4, IRREGULAR XYLEM 6
• Description: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G15630.1     AT5G15630.4     AT5G15630.3     AT5G15630.2     AT5G15630.5

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Function-related keywords:

• root

Literature:

• Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis.   DOI:  10.1104/pp.010884 ;  PMID:  12068095
• The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion.   DOI:  10.1104/pp.007468 ;  PMID:  12376623
• Characterization of the early response of Arabidopsis to Alternaria brassicicola infection using expression profiling.   DOI:  10.1104/pp.103.022186 ;  PMID:  12805591
• Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.   DOI:  10.1104/pp.103.021170 ;  PMID:  12805588
• Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics.   DOI:  10.1105/tpc.105.031542 ;  PMID:  15980264
• Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis.   DOI:  10.1111/j.1365-313X.2005.02560.x ;  PMID:  16262714
• Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis.   DOI:  10.1111/j.1365-313X.2005.02584.x ;  PMID:  16367961
• The Populus homeobox gene ARBORKNOX1 reveals overlapping mechanisms regulating the shoot apical meristem and the vascular cambium.   DOI:  10.1007/s11103-006-0059-y ;  PMID:  16927204
• ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2007.03109.x ;  PMID:  17565617
• GeneCAT–novel webtools that combine BLAST and co-expression analyses.   DOI:  10.1093/nar/gkn292 ;  PMID:  18480120
• CressExpress: a tool for large-scale mining of expression data from Arabidopsis.   DOI:  10.1104/pp.107.115535 ;  PMID:  18467456
• AtERF38 (At2g35700), an AP2/ERF family transcription factor gene from Arabidopsis thaliana, is expressed in specific cell types of roots, stems and seeds that undergo suberization.   DOI:  10.1016/j.plaphy.2008.07.003 ;  PMID:  18723362
• Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings.   DOI:  10.1093/jxb/ern344 ;  PMID:  19269997
• An integrative approach to the identification of Arabidopsis and rice genes involved in xylan and secondary wall development.   DOI:  10.1371/journal.pone.0015481 ;  PMID:  21124849
• Systematic identification of functional plant modules through the integration of complementary data sources.   DOI:  10.1104/pp.112.196725 ;  PMID:  22589469
• An Arabidopsis gene regulatory network for secondary cell wall synthesis.   DOI:  10.1038/nature14099 ;  PMID:  25533953
• Leaf biomechanical properties in Arabidopsis thaliana polysaccharide mutants affect drought survival.   DOI:  10.1016/j.jbiomech.2015.10.016 ;  PMID:  26520913
• Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.   DOI:  10.1104/pp.103.021170 ;  PMID:  12805588
• A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture.   DOI:  10.1074/mcp.M600250-MCP200 ;  PMID:  17151019

Sequences: