Gene Details:

• Gene ID: AT5G15450
• Gene Symbol: APG6, AtCLPB3, CLPB-P, CLPB3
• Gene Name: ALBINO AND PALE GREEN 6, CASEIN LYTIC PROTEINASE B-P, casein lytic proteinase B3
• Description: casein lytic proteinase B3;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G15450.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000025  — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020148  — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Germplasm Phenotype:

• SALK_111575  — Leaf chlorosis, defect in chloroplast development.
• clpB-p1  — Leaf chlorosis, defect in chloroplast development.

Function-related keywords:

• root ,  root tip ,  sepal ,  petiole ,  shoot apical meristem ,  plant sperm cell ,  guard cell

Literature:

• The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts.   DOI:  10.1007/s00294-002-0309-8 ;  PMID:  12185496
• Acquired thermotolerance and expression of the HSP100/ClpB genes of lima bean.   DOI:  10.1104/pp.123.3.1121 ;  PMID:  10889261
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications.   DOI:  10.1074/jbc.M309212200 ;  PMID:  14593120
• When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress.   DOI:  10.1104/pp.103.033431 ;  PMID:  15047901
• Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana.   DOI:  10.1074/jbc.M406358200 ;  PMID:  15561727
• Tobamovirus infection is independent of HSP101 mRNA induction and protein expression.   DOI:  10.1016/j.virusres.2006.03.013 ;  PMID:  16644052
• An Arabidopsis chloroplast-targeted Hsp101 homologue, APG6, has an essential role in chloroplast development as well as heat-stress response.   DOI:  10.1111/j.1365-313X.2006.02873.x ;  PMID:  16995899
• Protease gene families in Populus and Arabidopsis.   DOI:  10.1186/1471-2229-6-30 ;  PMID:  17181860
• The Arabidopsis ClpB/Hsp100 family of proteins: chaperones for stress and chloroplast development.   DOI:  10.1111/j.1365-313X.2006.02940.x ;  PMID:  17144892
• Core genome responses involved in acclimation to high temperature.   DOI:  10.1104/pp.107.112060 ;  PMID:  18055584
• Heat-shock response in Arabidopsis thaliana explored by multiplexed quantitative proteomics using differential metabolic labeling.   DOI:  10.1021/pr0705340 ;  PMID:  18189342
• Enrichment of phosphoproteins and phosphopeptide derivatization identify universal stress proteins in elicitor-treated Arabidopsis.   DOI:  10.1094/MPMI-21-10-1275 ;  PMID:  18785823
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis.   DOI:  10.1186/1471-2229-8-104 ;  PMID:  18854047
• Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism.   DOI:  10.1074/mcp.M900104-MCP200 ;  PMID:  19423572
• Plant Hsp100/ClpB-like proteins: poorly-analyzed cousins of yeast ClpB machine.   DOI:  10.1007/s11103-010-9682-8 ;  PMID:  20811767
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• Interference with plastome gene expression and Clp protease activity in Arabidopsis triggers a chloroplast unfolded protein response to restore protein homeostasis.   DOI:  10.1371/journal.pgen.1007022 ;  PMID:  28937985
• Acquired thermotolerance and expression of the HSP100/ClpB genes of lima bean.   DOI:  10.1104/pp.123.3.1121 ;  PMID:  10889261
• Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications.   DOI:  10.1074/jbc.M309212200 ;  PMID:  14593120
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: