Information report for AT5G15450
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020148 — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- SALK_111575 — Leaf chlorosis, defect in chloroplast development.
- clpB-p1 — Leaf chlorosis, defect in chloroplast development.
Functional Keywords
- root , root tip , sepal , petiole , shoot apical meristem , plant sperm cell , guard cell
Literature and News
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Acquired thermotolerance and expression of the HSP100/ClpB genes of lima bean. DOI: 10.1104/pp.123.3.1121 ; PMID: 10889261
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications. DOI: 10.1074/jbc.M309212200 ; PMID: 14593120
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Tobamovirus infection is independent of HSP101 mRNA induction and protein expression. DOI: 10.1016/j.virusres.2006.03.013 ; PMID: 16644052
- An Arabidopsis chloroplast-targeted Hsp101 homologue, APG6, has an essential role in chloroplast development as well as heat-stress response. DOI: 10.1111/j.1365-313X.2006.02873.x ; PMID: 16995899
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- The Arabidopsis ClpB/Hsp100 family of proteins: chaperones for stress and chloroplast development. DOI: 10.1111/j.1365-313X.2006.02940.x ; PMID: 17144892
- Core genome responses involved in acclimation to high temperature. DOI: 10.1104/pp.107.112060 ; PMID: 18055584
- Heat-shock response in Arabidopsis thaliana explored by multiplexed quantitative proteomics using differential metabolic labeling. DOI: 10.1021/pr0705340 ; PMID: 18189342
- Enrichment of phosphoproteins and phosphopeptide derivatization identify universal stress proteins in elicitor-treated Arabidopsis. DOI: 10.1094/MPMI-21-10-1275 ; PMID: 18785823
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism. DOI: 10.1074/mcp.M900104-MCP200 ; PMID: 19423572
- Plant Hsp100/ClpB-like proteins: poorly-analyzed cousins of yeast ClpB machine. DOI: 10.1007/s11103-010-9682-8 ; PMID: 20811767
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Interference with plastome gene expression and Clp protease activity in Arabidopsis triggers a chloroplast unfolded protein response to restore protein homeostasis. DOI: 10.1371/journal.pgen.1007022 ; PMID: 28937985
- Acquired thermotolerance and expression of the HSP100/ClpB genes of lima bean. DOI: 10.1104/pp.123.3.1121 ; PMID: 10889261
- Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications. DOI: 10.1074/jbc.M309212200 ; PMID: 14593120
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A654G1P4
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G1P4
- EnsemblPlants: AT5G15450.1
- Gramene: AT5G15450.1
- KEGG: ath:AT5G15450
- Orthologous matrix: VSKMMQG
- ExpressionAtlas: AT5G15450
- InterPro: IPR001270, IPR003593, IPR003959
- PANTHER: PTHR11638, PTHR11638:SF18
- SUPFAM: SSF52540, SSF81923
- PROSITE: PS00870, PS00871, PS51903
- Gene3D: 1.10.1780.10, 1.10.8.60, 3.40.50.300
- SWISS-MODEL: A0A654G1P4
- Conserved Domain Database: cd00009, cd19499
Sequences
cDNA Sequence
- >AT5G15450.1
ACATCTCGCCGTTTTGGTGGATTTGTGCTAAACTACCTGTTGTATTTGATCTTCCTTTTTCAATTGCTTGCTGTTCTTAAATTTCCGAGCTAATGGCGACGGCTACGACGACTGCTACGGCGGCGTTTAGTGGTGTAGTCAGTGTAGGAACGGAGACTCGAAGGATTTATTCGTTTTCTCATCTTCAACCTTCTGCGGCTTTTCCGGCGAAGCCTAGTTCCTTCAAATCTCTCAAATTAAAGCAGAGCGCGAGGCTCACACGGCGGCTTGATCATCGGCCGTTCGTTGTCCGATGTGAAGCTTCTTCTTCTAATGGAAGGCTTACACAGCAAGAATTCACAGAAATGGCGTGGCAATCGATAGTTTCGTCACCAGATGTTGCAAAAGAGAATAAGCAACAGATTGTGGAGACAGAGCATCTAATGAAAGCTCTTTTGGAGCAGAAGAATGGTTTAGCTCGTAGGATTTTCTCTAAGATCGGTGTGGATAACACAAAGGTTCTAGAAGCAACAGAGAAGTTCATTCAACGCCAACCAAAGGTGTATGGAGATGCTGCTGGTTCGATGTTGGGGCGTGATTTGGAAGCTCTGTTCCAGAGAGCAAGACAGTTTAAGAAAGATTTAAAGGACTCTTATGTGTCAGTGGAGCATTTGGTTCTTGCTTTTGCTGATGATAAGCGGTTTGGGAAACAGTTGTTTAAGGATTTTCAGATATCAGAGAGGAGCTTGAAATCTGCAATTGAATCCATTAGAGGGAAACAATCAGTCATTGACCAAGATCCGGAAGGCAAGTATGAGGCGTTGGAGAAGTATGGAAAAGACTTGACAGCAATGGCAAGAGAGGGAAAACTAGATCCTGTGATAGGTAGAGATGACGAGATCCGAAGATGCATTCAGATTCTCTCAAGGAGAACAAAGAACAACCCTGTGTTGATCGGTGAACCAGGTGTTGGTAAAACTGCAATTTCAGAAGGACTTGCTCAGAGGATTGTGCAAGGAGATGTACCTCAAGCATTGATGAACAGAAAGTTGATATCTCTTGATATGGGTGCTCTCATTGCTGGAGCAAAGTATCGGGGAGAATTCGAAGACAGACTAAAAGCTGTGCTTAAGGAAGTCACAGACTCAGAAGGCCAAATCATTTTGTTCATCGATGAGATCCATACAGTTGTTGGTGCAGGTGCGACTAATGGGGCCATGGATGCTGGTAATCTGCTGAAACCGATGCTGGGCCGAGGCGAGTTACGTTGTATCGGTGCAACCACGCTTGATGAATATAGGAAATACATAGAGAAAGATCCAGCCTTGGAGCGTAGGTTTCAACAGGTTTATGTTGATCAACCTACGGTTGAAGACACGATTTCTATTCTCCGTGGTTTGCGGGAAAGGTATGAACTACATCATGGAGTTCGCATCTCAGATAGTGCTCTAGTGGAAGCTGCTATCCTCTCAGACCGTTACATCAGTGGCCGGTTTCTACCCGATAAAGCAATTGACTTGGTCGATGAAGCGGCAGCCAAATTGAAAATGGAAATCACTTCGAAACCTACAGCTCTTGACGAGCTTGACCGTTCGGTAATAAAGCTTGAAATGGAGAGGCTTTCACTTACCAATGATACAGACAAAGCTTCTAGAGAGAGATTGAATCGAATTGAAACTGAGTTAGTGCTATTAAAGGAGAAACAAGCTGAGTTAACTGAACAGTGGGAGCACGAGAGGTCTGTTATGTCCCGTCTTCAGTCGATTAAAGAGGAGATTGATCGAGTAAACCTCGAGATCCAGCAGGCGGAACGTGAATACGATCTCAACCGTGCAGCTGAGCTCAAATACGGAAGCTTAAACTCATTGCAGCGACAGCTTAATGAAGCAGAGAAAGAGCTGAACGAGTACTTAAGCTCTGGGAAATCTATGTTCAGAGAAGAGGTTTTGGGTAGCGATATCGCCGAGATTGTGAGTAAATGGACTGGAATCCCGGTATCAAAACTTCAACAGTCTGAACGAGATAAGCTTCTACATTTGGAAGAAGAATTGCATAAAAGAGTAGTCGGTCAAAACCCAGCAGTGACTGCGGTAGCTGAAGCAATCCAACGATCAAGAGCTGGTCTTTCGGATCCAGGCCGTCCTATAGCTAGTTTCATGTTTATGGGACCAACTGGTGTTGGTAAAACAGAGCTAGCCAAAGCACTTGCTTCTTATATGTTCAACACTGAAGAAGCTTTAGTGAGAATTGACATGAGTGAATACATGGAGAAGCATGCGGTGTCTAGGCTCATTGGAGCTCCACCTGGATATGTTGGTTACGAAGAAGGAGGACAGTTAACAGAAACGGTTAGAAGAAGGCCTTATTCGGTCATTCTATTTGATGAGATTGAGAAAGCTCATGGAGATGTCTTCAATGTGTTTCTCCAAATCTTGGACGATGGGCGAGTCACAGATTCTCAAGGACGTACAGTGAGTTTCACCAATACCGTCATTATTATGACCTCAAATGTTGGTTCGCAGTTTATTCTGAACAACACAGATGATGATGCTAATGAGCTCTCTTATGAAACGATTAAAGAGAGAGTGATGAATGCTGCAAGGTCAATCTTTCGTCCTGAATTCATGAATAGGGTTGATGAGTATATAGTTTTCAAACCTCTTGACCGCGAGCAGATCAACCGCATTGTCCGGTTACAGCTGGCACGTGTGCAGAAGCGAATTGCAGACAGGAAAATGAAGATAAACATCACGGATGCAGCAGTCGATCTTCTTGGAAGCCTAGGGTATGATCCAAACTATGGAGCTAGACCTGTTAAGCGTGTGATACAGCAAAACATTGAGAATGAGCTTGCTAAGGGTATCTTGAGAGGAGATTTCAAGGAGGAAGATGGCATTTTGATCGATACCGAGGTCACAGCGTTCTCCAATGGCCAGTTACCTCAGCAAAAGCTCACATTCAAGAAGATTGAGTCAGAAACAGCAGATGCTGAACAAGAAGAAGCAGCTTTCTCAAAATAGAGTAGTTGAAAATGCAACCTTTTGGAGCCCAAGAAGATTCAGACTTTTCAGTACAGAACTTCTAGTGAGTTACTTGTCACAAAAGACTGATAATATTTATCTCAATGTGAGAGTTTATATAAATCATAAGCTTATGAGTCATTGTACTGATGTCTCAAAGGTCCAGAGGTTATGAAAATTGTTGATC
CDS Sequence
Protein Sequence