Information report for AT5G15400
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Interdependency of brassinosteroid and auxin signaling in Arabidopsis. DOI: 10.1371/journal.pbio.0020258 ; PMID: 15328536
- Regulation of flowering time in Arabidopsis by K homology domain proteins. DOI: 10.1073/pnas.0404552101 ; PMID: 15310842
- Combinations of WOX activities regulate tissue proliferation during Arabidopsis embryonic development. DOI: 10.1016/j.ydbio.2007.07.019 ; PMID: 17706632
- Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes. DOI: 10.1094/MPMI-21-2-0244 ; PMID: 18184068
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- AtCDC48A is involved in the turnover of an NLR immune receptor. DOI: 10.1111/tpj.13251 ; PMID: 27340941
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
Gene Resources
- UniProt: A0A654G1E5
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G1E5
- EnsemblPlants: AT5G15400.1
- Gramene: AT5G15400.1
- KEGG: ath:AT5G15400
- Orthologous matrix: WLTEIAM
- ExpressionAtlas: AT5G15400
- InterPro: IPR003613, IPR013083, IPR019474
- PANTHER: PTHR13931, PTHR13931:SF2
- SUPFAM: SSF57850
- PROSITE: PS51698
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A654G1E5
- Conserved Domain Database: cd16657
Sequences
cDNA Sequence
- >AT5G15400.1
AAAAGTAATTGTCTTAATAAGTATAAACGACGTCGTTAGTAAGTACGACGTTTGCATATATCCTATATAGACTTTTTGTCCAAGCTCAGGACTTGCTAAAGCTCGTTCAGAGACTCCAAAAGAGTTCATAAACAAAAACCTACTCCCAGAAAGTTCTTCCAAATCTCTCGCCATGGTTTCTCTCTTCTTTCGTGAATTTTAGTTTTTCTAAATTTAATTATACTTTAAATTGCTAAGTCCAAACTCTTTCGCTTTTGATTCATCGGTAATACAAGTTTAAGAAAAAAAATTCTTATATTTATCTCTCAAATCGAGTTTCGAGTGTTTGATTTGATTCGTAAAATCAATGGCGACGAGCAAACCTCAAAGATCGCCGGCTGAAATTGAGGATATAATCCTCCGGAAGATATTTTATGTAACCCTAACGGAATCAACTGATTCCGATCCTCGTATTGTTTACTTGGAGATGACGGCCGCTGAGATTCTCAGCGAAGGTAAAGAGCTTTTGCTTTCTCGTGATTTGATGGAGAGAGTTCTCATAGATCGTCTCTCCGGCGACTTTTCCGACGCCGAACCGCCTTTCCCGTATTTAATCGGTTGCCACCGTCGTGCTTACGACGAATCGAAGAAAATCCAGTCGATGAAGGATAAGAATCTGAGATCGGAGATGGAGATTGTCACTAAACAAGCGAAGAAGCTTGCTGTTTCTTACTGTAGGATTCACTTGGGGAATCCTGACATGTTTGGGAACTCGGATAAACCTAGTGGTGGATTGGATAATAGGTTGAAGAAGAGGAATGTCTCTCCGGTTCTTCCGTTGATCTTTGCTGAGGTTGGTTCTGGTTCGTTGGATATGTTTGGAGCTAGTAGCAGTGGGGTTCAAGCTCCTCCTGGGTTTTTGGATGAGTTTTTCAAAGACTCGGATTTTGATAGCTTGGACTCGATTCTAAAGGAGCTGTATGAGGATTTGAGGTCTACGGTTATAAATGTATCAGTGCTTGGAGATTTCCAGCCACCACTGAGGGCACTCAAGTATCTTGTTAGCTTACCAGTAGGAGCTAAATCTCTGGTTAGTCATGAGTGGTGGGTTCCACGGGGTGCCTATATGAACGGCCGAGCAATGGAGTTGACTAGCATTCTTGGGCCTTTCTTCCATATTAGTGCGCTGCCAGATAATACACTATTCAAGAGTCAACCTGATGTTGGGCAGCAGTGTTTCTCTGAAGCATCGGAACGTCGTCCCGCAGATTTATTATCATCCTTCTCCACGATTAAAAATTTCATGAACATTTTGTACAGCGGGCTGCATGATGTATTGATGATTTTACTTAAAAGTACTGATACCCGTGAGCGTGTTCTACAGTTTCTTGCAGAGGTGATCAATGCAAATGCGTCTAGAGCCCATATACAGGTTGATCCAGTCTCTTGTGCTAGCTCAGGCATGTTTGTTAACCTTAGTGCAGTAATGCTCCGGCTCTGTGAACCATTTTTAGACCCACATTTAACGAAAAGGGATAAGATTGATCCAAAATACGCATTCTGTGGCCATCGCTTAAAATTAAGCGACTTGACCGCTCTCCATGCATCATCCGAAGAAGTTACTGAGTGGATTGGCAAAGATGCTATGGCAAACGCAAATGATGCTGGGCGAGAAAATGGGAACGAAAGTCGCTTGTTACAATCCAAAGAAGCCACAAGTTCTAGTAGTAATGCTTCTGGGCAAAATGCAAAGTCAGCAACTAAATACACTTTCATTTGTGAATGCTTCTTTATGACTGCTAGGGTCCTCAATTTGGGTCTCCTAAAAGCACTCTCTGACTTTAAACATCTTGCTCAGGACATCTCGAGAGGTGAAGATAATCTTGCAACGCTAAAAGCCATGAGAGATCAAGCACCTTCTCCACAGTTGGAACTTGATATATCCCGAATGGAAAAAGAACTAGAGCTGTCTTCGCAGGAAAAGCTTTGCCATGAGGCCCAAATATTGAGGGATGGAGATTTTATTCAGCGAGCTCTGTCTTTCTATCGCCTAATGGTTGTTTGGTTAGTTGGACTAGTCGGTGGCTTTAAGATGCCTCTACCGTCAACTTGCCCTATGGAATTCTCCTGTATGCCTGAGCATTTTGTTGAAGATGCAATGGAGTTGCTGATATTCGCTTCAAGAATTCCCAAAGCTTTGGACGGGGTGCCGCTGGACGACTTTATGAACTTCATAATTATGTTCATGGCAAGTCCTGAATATGTTAGAAACCCGTATCTCAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATGCCTCGTTCAAGTAGTTCTTCTTCTGCTACATCTACTCTCTTTGAGGGACATCAGTTATCGCTCGAGTATCTTGTCAGGAATTTACTGAAACTATATGTTGACATTGAGTTCACGGGTTCACACACTCAGTTCTATGACAAGTTCAATATTCGCCACAACATTGCCGAGCTTTTAGAGTATCTCTGGCAGGTGCCTAGTCACCGAAATGCATGGAGACGGATTGCAAAAGACGAAGAGAAGGGCGTGTACTTGAACTTCTTAAACTTCTTAGTCAATGATAGCATCTATCTTCTGGATGAAAGTCTAAACAAAATTCTCGAGATTAAACAAATCGAGGCAGACATGTCAAATACTGCAGAGTGGGAGCAGAGACCAACTCAAGAGAGACAGGAGAGAACAAGACTCTTCCATTCGCAGGAGAATATTGTTAGAATCGACATGAAGCTGGCAAATGAAGATGTGACTATGCTTGCATTTACATCCGAGGAGATCACTGCCCCTTTCCTACTCCCTGAGATGGTTGAGAGGGTTGCCAACATGCTTAACTACTTCTTGCTACAACTCGTGGGTCCACAGCGTAAATCTTTAAGCCTGAAAGATCCTGAGAAATATGAATTCCGTCCAAAACAGTTACTTAAACAGATCGTTCGCATATATGTTAATCTCGCAAGAGGAGACACAGTAAACATATTCCCTGGTGCCATCTCCAGTGATGGCCGATCATATAATGAACAGCTATTCAATGCAGGAGCAGATGTGCTTAGGAGAATAGGTGAAGAGGGAAGAATCATTCAAGAGTTTATGGAGTTAGGCACAAAAGCCAAAGCTGCTGCTTCTGAAGCTCTGGATGCTGAAGCTGCACTTGGGGAAATACCAGACGAGTTCCTTGACCCAATTCAGTACACGCTAATGAGAGATCCAGTAATACTTCCAAGCTCAAGAATCACAGTTGATCGTCCCATCATTCAACGTCATCTTCTCAGCGACAATCATGATCCATTTAACCGAGCACATTTGACATCGGATATGTTGATACCGGACATCGAGTTGAAGGCGAAAATCGATGAGTTTGTGAAGTCGCATCAGTCTAAGAAACGGACAAGTGGAGAAGATAGCAGCAACAAGGAAAGGATACAGACTACAAACAGTGATATGTTAATTGATTAATTATGTGTTCCAAAAGTAACAAAATAATAACAATTATTCAGGACTTTTTTTTTTTACTTTTGCTAGGCTTTCTTTTCTATTAGGATTTATCTATCTATTTTAGGGCTTGCTTTCCACTTATTTGATGCCACGGGAAAAAAACTTATAAATATCATGTCTAGAACTGTTTCTATCATAAGTTCGATGTGTTCACGAGTTTCTATGCATTTCGACGTTTGTTCATGGATTACTAGTTGGCATAAGAGTTATGAGTGACCAATTCTTGAAAGGCGAAA
CDS Sequence
Protein Sequence