Gene Details:

• Gene ID: AT5G14660
• Gene Symbol: ATDEF2, DEF2, PDF1B
• Gene Name: peptide deformylase 1B
• Description: peptide deformylase 1B;(source:Araport11)
• TAIR Accession: locus:2222667
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G14660.1     AT5G14660.2     AT5G14660.3

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0005739  — is active in — mitochondrion
• GO:0048316  — acts upstream of or within — seed development
• GO:0006351  — acts upstream of or within — DNA-templated transcription
• GO:0009507  — located in — chloroplast
• GO:0051173  — acts upstream of or within — positive regulation of nitrogen compound metabolic process
• GO:0009536  — located in — plastid
• GO:0042586  — enables — peptide deformylase activity

Function-related keywords:

• root

Literature:

• Identification of eukaryotic peptide deformylases reveals universality of N-terminal protein processing mechanisms.   DOI:  10.1093/emboj/19.21.5916 ;  PMID:  11060042
• Distinctive features of the two classes of eukaryotic peptide deformylases.   DOI:  10.1006/jmbi.2001.5175 ;  PMID:  11733990
• Eukaryotic peptide deformylases. Nuclear-encoded and chloroplast-targeted enzymes in Arabidopsis.   DOI:  10.1104/pp.127.1.97 ;  PMID:  11553738
• Specificity of chloroplast-localized peptide deformylases as determined with peptide analogs of chloroplast-translated proteins.   DOI:  10.1016/s0003-9861(02)00426-5 ;  PMID:  12234499
• Control of protein life-span by N-terminal methionine excision.   DOI:  10.1093/emboj/cdg007 ;  PMID:  12505980
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Plant peptide deformylase: a novel selectable marker and herbicide target based on essential cotranslational chloroplast protein processing.   DOI:  10.1111/j.1467-7652.2007.00238.x ;  PMID:  17309682
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• Effect of salt stress on genes encoding translation-associated proteins in Arabidopsis thaliana.   DOI:  10.4161/psb.21218 ;  PMID:  22899071
• Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins.   DOI:  10.1371/journal.pone.0073291 ;  PMID:  24023856
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequences: