Information report for AT5G14660
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005739 — is active in — mitochondrion
- GO:0048316 — acts upstream of or within — seed development
- GO:0006351 — acts upstream of or within — DNA-templated transcription
- GO:0009507 — located in — chloroplast
- GO:0051173 — acts upstream of or within — positive regulation of nitrogen compound metabolic process
- GO:0009536 — located in — plastid
- GO:0042586 — enables — peptide deformylase activity
Functional Keywords
Literature and News
- Identification of eukaryotic peptide deformylases reveals universality of N-terminal protein processing mechanisms. DOI: 10.1093/emboj/19.21.5916 ; PMID: 11060042
- Distinctive features of the two classes of eukaryotic peptide deformylases. DOI: 10.1006/jmbi.2001.5175 ; PMID: 11733990
- Eukaryotic peptide deformylases. Nuclear-encoded and chloroplast-targeted enzymes in Arabidopsis. DOI: 10.1104/pp.127.1.97 ; PMID: 11553738
- Specificity of chloroplast-localized peptide deformylases as determined with peptide analogs of chloroplast-translated proteins. DOI: 10.1016/s0003-9861(02)00426-5 ; PMID: 12234499
- Control of protein life-span by N-terminal methionine excision. DOI: 10.1093/emboj/cdg007 ; PMID: 12505980
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Plant peptide deformylase: a novel selectable marker and herbicide target based on essential cotranslational chloroplast protein processing. DOI: 10.1111/j.1467-7652.2007.00238.x ; PMID: 17309682
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Effect of salt stress on genes encoding translation-associated proteins in Arabidopsis thaliana. DOI: 10.4161/psb.21218 ; PMID: 22899071
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654G1P3
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G1P3
- EnsemblPlants: AT5G14660.1, AT5G14660.2, AT5G14660.3
- Gramene: AT5G14660.1, AT5G14660.2, AT5G14660.3
- KEGG: ath:AT5G14660
- Orthologous matrix: CAAWLQP
- ExpressionAtlas: AT5G14660
- InterPro: IPR023635, IPR036821
- PANTHER: PTHR10458, PTHR10458:SF22
- SUPFAM: SSF56420
- Gene3D: 3.90.45.10
- SWISS-MODEL: A0A654G1P3
- Conserved Domain Database: cd00487
Sequences
cDNA Sequence
- >AT5G14660.2
ACTCAATCTTTTACTTACTCTCCACACAAAATTCAGTTTTTCCGCTTCGTCTGAAATTACTCTTCCTCTCTAGCCATGGCCGTCTGTAACTGCTTCCTCCAAGCTCCACCACTCTCTCGCATACTCCTACCGGTTTTATCTCGCCGAGCTACTACTCTCTCTGCCGGTTATGGTCGGCTCAAATCCACGGTCACGTTCTGCTCTACTGTGAACCGGACCAGTCCTCTGACATCTTCGGTCCGCGCAGAAGTAAAGCGCGTCTCGCGTAAAGACGATAAAGTAGCTTCAGCTACTGATGTTCAATTTGAGACGCCTTTGAAGATTGTTGAGTATCCGGATCCTATACTACGGGCTAAGAACAAGAGGATTGATATTTTTGACGAGAATTTAAAGAACTTGGTTGATGCTATGTTTGATGTTATGTACAAAACGGATGGCATTGGGCTCTCAGCACCACAAGTAGGTCTCAATGTTCAACTCATGGTGTTTAATCCAGCTGGAGAGCCTGGAGAAGGAAAAGAAATTGTCCTTGTAAATCCGAAAATCAAGAAATATTCCGATAAATTAGTACCGTTTGATGAAGGATGCCTCTCCTTCCCGGGGATCTATGCTGAAGTTGTTCGACCACAATCTGTCAAGATTGATGCAAGGGATATTACTGGTGAAAGATTTTCAATCAGTCTATCACGTTTACCTGCACGAATCTTTCAGCACGAATACGACCATCTGGAGGGAGTTCTCTTCTTTGACAGAATGACGGATCAAGTTCTTGATAGCATTCGTGAAGAGCTAGAGGCCCTAGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAGAGTAGAAGCACGACAAAAAAGGAAAGCAGGAGTTGGTTTTGGCAAACGTTGATGAGACATTCTCGCTCAAATTCCTTTCATCTACGAATTTACTATGGTATAGGAAGCAGACAATGACAAGAGACACGTTTGCTTTTTAAATTTAGAGGAGCACATCACATTATGTGATGCAAATCTCCCAAATAGGATGTACGGTTGAGACACAGATCATATATTTCAGAATCTTATTTTGGTCTGAGTAATATATTTCTTCAGTTTGTCTGTCTTGTGCTGTTAGCTTGAGCTTTGGAACTGCGTTAAGAATGTTCTTGCCGACTAAGTTGAACCATGTCGTGGTTTATCCGTTGTT - >AT5G14660.3
ACTCAATCTTTTACTTACTCTCCACACAAAATTCAGTTTTTCCGCTTCGTCTGAAATTACTCTTCCTCTCTAGCCATGGCCGTCTGTAACTGCTTCCTCCAAGCTCCACCACTCTCTCGCATACTCCTACCGGTTTTATCTCGCCGAGCTACTACTCTCTCTGCCGGTTATGGTCGGCTCAAATCCACGGTCACGTTCTGCTCTACTGTGAACCGGACCAGTCCTCTGACATCTTCGGTCCGCGCAGAAGTAAAGCGCGTCTCGCGTAAAGACGATAAAGTAGCTTCAGCTACTGATGTTCAATTTGAGACGCCTTTGAAGATTGTTGAGTATCCGGATCCTATACTACGGGCTAAGAACAAGAGGATTGATATTTTTGACGAGAATTTAAAGAACTTGGTTGATGCTATGTTTGATGTTATGTACAAAACGGATGGCATTGGGCTCTCAGCACCACAAGTAGGTCTCAATGTTCAACTCATGGTGTTTAATCCAGCTGGAGAGCCTGGAGAAGGAAAAGAAATTGTCCTTGTAAATCCGAAAATCAAGAAATATTCCGATAAATTAGTACCGTTTGATGAAGGATGCCTCTCCTTCCCGGGGATCTATGCTGAAGTTGTTCGACCACAATCTGTCAAGATTGATGCAAGGGATATTACTGGTGAAAGATTTTCAATCAGTCTATCACGTTTACCTGCACGAATCTTTCAGCACGAATACGACCATCTGGAGGGAGTTCTCTTCTTTGACAGAATGACGGATCAAGTTCTTGATAGCATTCGTGAAGAGCTAGAGGCCCTAGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAGAGTAGAAGCACGACAAAAAAGGAAAGCAGGAGTTGGTTTTGGCAAACGTTGATGAGACATTCTCGCTCAAATTCCTTTCATCTACGAATTTACTATGGTATAGGAAGCAGACAATGACAAGAGACACGTTTGCTTTTTAAATTTAGAGGAGCACATCACATTATGTGATGCAAATCTCCCAAATAGGATGTACGGTTGAGACACAGATCATATATTTCAGAATCTTATTTTGGTCTGAGTAATATATTTCTTCAGTTTGTCTGTCTTGTGCTGTTAGCTTGAGCTTTGGAACTGCGTTAAGAATGTTCTTGCCGACTAAGTTGAACCATGTCGTGGTTTATCCGTTGTT - >AT5G14660.1
ACTCAATCTTTTACTTACTCTCCACACAAAATTCAGTTTTTCCGCTTCGTCTGAAATTACTCTTCCTCTCTAGCCATGGCCGTCTGTAACTGCTTCCTCCAAGCTCCACCACTCTCTCGCATACTCCTACCGGTTTTATCTCGCCGAGCTACTACTCTCTCTGCCGGTTATGGTCGGCTCAAATCCACGGTCACGTTCTGCTCTACTGTGAACCGGACCAGTCCTCTGACATCTTCGGTCCGCGCAGAAGTAAAGCGCGTCTCGCGTAAAGACGATAAAGTAGCTTCAGCTACTGATGTTCAATTTGAGACGCCTTTGAAGATTGTTGAGTATCCGGATCCTATACTACGGGCTAAGAACAAGAGGATTGATATTTTTGACGAGAATTTAAAGAACTTGGTTGATGCTATGTTTGATGTTATGTACAAAACGGATGGCATTGGGCTCTCAGCACCACAAGTAGGTCTCAATGTTCAACTCATGGTGTTTAATCCAGCTGGAGAGCCTGGAGAAGGAAAAGAAATTGTCCTTGTAAATCCGAAAATCAAGAAATATTCCGATAAATTAGTACCGTTTGATGAAGGATGCCTCTCCTTCCCGGGGATCTATGCTGAAGTTGTTCGACCACAATCTGTCAAGATTGATGCAAGGGATATTACTGGTGAAAGATTTTCAATCAGTCTATCACGTTTACCTGCACGAATCTTTCAGCACGAATACGACCATCTGGAGGGAGTTCTCTTCTTTGACAGAATGACGGATCAAGTTCTTGATAGCATTCGTGAAGAGCTAGAGGCCCTAGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAGAGTAGAAGCACGACAAAAAAGGAAAGCAGGAGTTGGTTTTGGCAAACGTTGATGAGACATTCTCGCTCAAATTCCTTTCATCTACGAATTTACTATGGTATAGGAAGCAGACAATGACAAGAGACACGTTTGCTTTTTAAATTTAGAGGAGCACATCACATTATGTGATGCAAATCTCCCAAATAGGATGTACGGTTGAGACACAGATCATATATTTCAGAATCTTATTTTGGTCTGAGTAATATATTTCTTCAGTTTGTCTGTCTTGTGCTGTTAGCTTGAGCTTTGGAACTGCGTTAAGAATGTTCTTGCCGACTAAGTTGAACCATGTCGTGGTTTATCCGTTGTT
CDS Sequence
Protein Sequence