Information report for AT5G14650
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009505 — located in — plant-type cell wall
- GO:0004650 — enables — polygalacturonase activity
- GO:0005975 — involved in — carbohydrate metabolic process
- GO:0009827 — acts upstream of or within — plant-type cell wall modification
- GO:0005576 — located in — extracellular region
Functional Keywords
Literature and News
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes. DOI: 10.1186/1471-2164-7-81 ; PMID: 16615871
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles. DOI: 10.1371/journal.pone.0046944 ; PMID: 23056537
- The exogenous application of AtPGLR, an endo-polygalacturonase, triggers pollen tube burst and repair. DOI: 10.1111/tpj.14753 ; PMID: 32215973
- Plant polygalacturonase structures specify enzyme dynamics and processivities to fine-tune cell wall pectins. DOI: 10.1093/plcell/koad134 ; PMID: 37202370
Gene Resources
- UniProt: Q9LYJ5
- EMBL: AL163792, CP002688
- EnsemblPlants: AT5G14650.1
- Gramene: AT5G14650.1
- Orthologous matrix: NMMLIKS
- ExpressionAtlas: AT5G14650
Sequences
cDNA Sequence
- >AT5G14650.1
GTTTTTTCTCCACTTATAAATATGACCCTCGCTTTACCATTTTATATCATCTCATAATTAAACAAATTCTACCCTAGAAACAAATCGTTTACAATATTAAAGATGTGTAGACTAACATTGAAATGTCTTTCCCTGAACTTTCTCCTCTTAATCTCCTTATTCTCTTCGAGATTCGGGACTTGTGACGCTAGGTACAGTGTATACTGGAAAGGAAACCGAAGGTCTATCGCCGAAGGGGGAAGTTCCGGAACAATCAATGTGCTTGACCATGGCGCAAAAGGTGACGGGACAAGTGATGACACAAAGGCTTTTGAAGATGCTTGGCAGGTAGCTTGTAAGGTGGCAGCGTCAACATTATTAGTTCCATCTGGTTCTACGTTCCTTGTTGGACCTGTTTCCTTCCTGGGAAAAGAATGTAAAGAGAAAATCGTCTTTCAGTTAGAAGGAAAGATCATAGCTCCAACGAGTGCTAGTGCATGGGGATCAGGTCTCTTGCAATGGATAGAATTCAAAGCACTTCAAGGAATCACTATAAAAGGAAAAGGGATCATCGATGGACGAGGATCAGTATGGTGGAACGACATGATGGGTACAAAAATGCCAAGGACCAAACCAACAGCTTTGAGGTTCTACGGGAGTAACGGTGTTACGGTCAGTGGAATAACCATACAGAACAGCCCTCAAACCCACCTCAAGTTTGATAACTGCATAAGCATCCAAGTTTCTGATTTCACAACTTCATCCCCTGGAGATTCCCCAAACACAGATGGAATCCACCTGCAAAACTCTCAAGATGCCGTTATATATCGCAGCACGCTGGCTTGTGGAGATGACTGTATATCAATTCAAACGGGATGCTCGAATATCAACATACACGATGTAGACTGTGGCCCTGGCCATGGAATTAGCATTGGAGGACTGGGAAAGGACAATACAAAGGCGTGTGTTTCAAACATCACTGTCCGTGATGTCACGATGCATGAAACTACGAATGGTGTTCGAATAAAGTCCTGGCAGGGAGGATCAGGGTCTGTAAAACAAGTTATGTTTTCAAATATTCAAGTCAGCAACGTAGCCAATCCAATAATAATAGATCAATATTACTGCGATGGTGGCGGATGCCACAATGAAACTTCAGCAGTCGCTGTATCAAACATAAACTACATAAACATAAAAGGTACCTACACCAAAGAACCTGTACGCTTTGCCTGCAGTGATAGCTTGCCATGCACAGGAATCTCACTGTCGACCATCGAGCTTAAGCCAGCCACAGGAAAAGCAAGTTCACTTGATCCTTTCTGCTGGAAAGCACACGGTGAACTGAAGACAAAAACTCTTCCACCAATACAATGTTTGAAAACAGAAAAGTCACCGGAAGCTGCAAGTCGGTCTAATAATGATGCTTGCTGATATTAGAGTAAGAAATTATGTAGAAATGTTAAGATAGGCCACACATTATACGAATAAAGAAGGGTTTGATTCCCTTCCTTTGTCTTATACTAGTTTTTATAAATCATTTGCAAACACAATGTAATATATGGCATGCAATGTATTGCATTCTGTTATAGACAATTGGAAGTTATTGAGTTAGTCCCAACCCATAGCCTAAGGAAGGATTTCATCTGTGAAGCAACAATCTAACAATTATGACTATTTGGACCAGTTATGATAGAACACATCACAAGTAATATACTTCTTCGAAGAAAAGTAATGTCATCTGAGGGATGCAAAGAAAGTATATAAAATGAGAGCTAAAC - >AT5G14650.2
GTTTTTTCTCCACTTATAAATATGACCCTCGCTTTACCATTTTATATCATCTCATAATTAAACAAATTCTACCCTAGAAACAAATCGTTTACAATATTAAAGATGTGTAGACTAACATTGAAATGTCTTTCCCTGAACTTTCTCCTCTTAATCTCCTTATTCTCTTCGAGATTCGGGACTTGTGACGCTAGGTACAGTGTATACTGGAAAGGAAACCGAAGGTCTATCGCCGAAGGGGGAAGTTCCGGAACAATCAATGTGCTTGACCATGGCGCAAAAGGTGACGGGACAAGTGATGACACAAAGGCTTTTGAAGATGCTTGGCAGGTAGCTTGTAAGGTGGCAGCGTCAACATTATTAGTTCCATCTGGTTCTACGTTCCTTGTTGGACCTGTTTCCTTCCTGGGAAAAGAATGTAAAGAGAAAATCGTCTTTCAGTTAGAAGGAAAGATCATAGCTCCAACGAGTGCTAGTGCATGGGGATCAGGTCTCTTGCAATGGATAGAATTCAAAGCACTTCAAGGAATCACTATAAAAGGAAAAGGGATCATCGATGGACGAGGATCAGTATGGTGGAACGACATGATGGGTACAAAAATGCCAAGGACCAAACCAACAGCTTTGAGGTTCTACGGGAGTAACGGTGTTACGGTCAGTGGAATAACCATACAGAACAGCCCTCAAACCCACCTCAAGTTTGATAACTGCATAAGCATCCAAGTTTCTGATTTCACAACTTCATCCCCTGGAGATTCCCCAAACACAGATGGAATCCACCTGCAAAACTCTCAAGATGCCGTTATATATCGCAGCACGCTGGCTTGTGGAGATGACTGTATATCAATTCAAACGGGATGCTCGAATATCAACATACACGATGTAGACTGTGGCCCTGGCCATGGAATTAGCATTGGAGGACTGGGAAAGGACAATACAAAGGCGTGTGTTTCAAACATCACTGTCCGTGATGTCACGATGCATGAAACTACGAATGGTGTTCGAATAAAGTCCTGGCAGGGAGGATCAGGGTCTGTAAAACAAGTTATGTTTTCAAATATTCAAGTCAGCAACGTAGCCAATCCAATAATAATAGATCAATATTACTGCGATGGTGGCGGATGCCACAATGAAACTTCAGCAGTCGCTGTATCAAACATAAACTACATAAACATAAAAGGTACCTACACCAAAGAACCTGTACGCTTTGCCTGCAGTGATAGCTTGCCATGCACAGGAATCTCACTGTCGACCATCGAGCTTAAGCCAGCCACAGGAAAAGCAAGTTCACTTGATCCTTTCTGCTGGAAAGCACACGGTGAACTGAAGACAAAAACTCTTCCACCAATACAATGTTTGAAAACAGAAAAGTCACCGGAAGCTGCAAGTCGGTCTAATAATGATGCTTGCTGATATTAGAGTAAGAAATTATGTAGAAATGTTAAGATAGGCCACACATTATACGAATAAAGAAGGGTTTGATTCCCTTCCTTTGTCTTATACTAGTTTTTATAAATCATTTGCAAACACAATGTAATATATGGCATGCAATGTATTGCATTCTGTTATAGACAATTGGAAGTTATTGAGTTAGTCCCAACCCATAGCCTAAGGAAGGATTTCATCTGTGAAGCAACAATCTAACAATTATGACTATTTGGACCAGTTATGATAGAACACATCACAAGTAATATACTTCTTCGAAGAAAAGTAATGTCATCTGAGGGATGCAAAGAAAGTATATAAAATGAGAGCTAAAC
CDS Sequence
Protein Sequence