Gene Details:
- Gene ID: AT5G14460
- Gene Symbol: TRUB2
- Gene Name:
- Description:
- TAIR Accession: locus:2145708
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0006400 — involved in — tRNA modification
- GO:0009982 — enables — pseudouridine synthase activity
- GO:0003729 — enables — mRNA binding
- GO:0005634 — located in — nucleus
- GO:0005739 — is active in — mitochondrion
- GO:1990481 — involved in — mRNA pseudouridine synthesis
Function-related keywords:
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Mutations in SUPPRESSOR OF VARIEGATION1, a factor required for normal chloroplast translation, suppress var2-mediated leaf variegation in Arabidopsis. DOI: 10.1105/tpc.107.054965 ; PMID: 18599582
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Genome-Wide Identification and Expression Analysis of Pseudouridine Synthase Family in Arabidopsis and Maize. DOI: 10.3390/ijms23052680 ; PMID: 35269820
- Mutations in SUPPRESSOR OF VARIEGATION1, a factor required for normal chloroplast translation, suppress var2-mediated leaf variegation in Arabidopsis. DOI: 10.1105/tpc.107.054965 ; PMID: 18599582
Sequences:
cDNA Sequence
- >AT5G14460.1
GAGAAAACATCGTGTCGTTTTAATTTATCGTTTAACATCATCACCTTCTCTTCTCCGTTGGAGAACCACTGCAATAATCACCGGAGGTGGATTTCATCTTTCCCCCGCCTCCAGTGTTCTCAATAATGGCGAAATCTCTACACTTCACAAGACTAATGTCTTCTTCAGCAAGAATGTCAATGACTTCTCCTCTCTTCTTCTCCTCAGTCAAACCATGGAGAAACATCCATAAACCCTACTTGGCTTCTCTCTTCCTCTCCACAACATCTACTCGATACCCACTTCAATACGACATGATCATCAATCGTCCCACACAATCATCTCTCTCTCAAAACCGTCGTCGTCCCCCTAAAGCCATCGAATCCGGTGCACCTGACTCAGCAGAGCCGGAATTCGATTCATGGGTCGACAATAAACTGGCTATGGAGCGTGAACAGGGTCGACCCGGTTCTGGAGATCCGGAAATGGATAAAGCCAAGAGGAAATACTACAGTAAGAGAAGGAAGAGACTATACGGGTCTGATTCTGAAGATGAGAACAGTAGCAGAAAATCAGATGAAGGATTCGTTGAATTGAAACCTGAAGTTGTTGAATTTGATAGGTTACATCAGAGAGAAGAGGAATTGTATTTTTATGATACTTTTGCTTATCCATGGGAGAAAGATAAGCATTATAAGATGGTGTATCAGTTAGAGAAGAAGTATTATCCTGACCAGTGTTTAGATAAGGCGTTTCTGCAACCTGGAGAAGTTTTGAAGAAGAGTGATGATTCTGGGAAAGTTAGAGGGAAGAAGAAAGTAGTAGCAGCACTTGGTGGGAAGAGAAGTGAGGTTAAACGAATTGGTATGGAGAATTGTGATGAGGATGATGATAAGTTGGTGTTTTTTGATGAAGTGAAGGAGAAGGAGGAGAAGAAGAAGTCAGAGGATGATGTTGTTGTTGTTACTGAGAAGAAAGTGGAACAGTTCTTTAAGGGTTTAACGAAATCTCCCAATGAGAAAGGTATGGCTAGTGGTGGTGGTGATGGAGAACCTTTTCTTGTTACGAGAAACGGTGAACTTCCTCCTAGATGGGATGGTCCTAACGGTACAGTGCTTTTGGTGAACAAACCTAAAGGATGGACTTCTTTCACTGTCTGTGGTAAGCTACGACGATTAGTCAAAGTGAAAAAGGTGGGTCATGCTGGAACACTTGATCCCATGGCTACTGGTCTATTAATCGTCTGCGTCGGTAAAGCCACTAAGGTTGTTGACAGATACCAAGGTATGATCAAAGGTTATAGCGGAGTTTTTCGTCTTGGTGAAGCCACTTCAACTCTAGACGCTGACTCTCCTGTGATTCAGCGAGAGTCTTGGGAGCATATAAAAGATGATGACATTAAGAAAGCTTTGACATCATTTCTTGGAGAAATATGGCAAGTTCCACCGATGTTCTCTGCGATAAAAGTTGGAGGTGAGAAGATGTACGAGAAGGCAAGAAGAGGAGAAACCGTAGAGCTTTCTCCAAGAAGAATTTCAATTTTCCAGTTTGACATTGAACGCAGTTTAGATGACAGACAAAATCTGATATTCCGGGTTATATGCTCTAAGGGTACATACATAAGATCTCTCTGTGCAGATCTTGCGAAAGCTCTTGGAAGTTGTGCTCACCTCACTGCTCTCCGGCGAGATTCAATTGGTGAATATTCTGCTAATGATGCTTGGGAATTCAATGAGTTAGAAGCAGCAATCACTAAAAACTACTTCTAGAAGGAAACAACTTCTGGTTTGCTAGACGCCTCCATAGATGATAGTAGAAGATCCACCAACTGTGAATTCTTTGCGACAAACAACTCAAAAAGGTTACACAGGATTGCATAGATCATTGATTGTTCCTTAAAACACTTACATTATTGCCCTAAGAGTCTAAGGATCAAATCTTTATTTCGG
CDS Sequence
Protein Sequence