Information report for AT5G14250
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:0005515 — enables — protein binding
- GO:0010971 — acts upstream of or within — positive regulation of G2/M transition of mitotic cell cycle
- GO:0000338 — acts upstream of or within — protein deneddylation
- GO:0008180 — part of — COP9 signalosome
- GO:0009640 — acts upstream of or within — photomorphogenesis
- GO:0008180 — located in — COP9 signalosome
- CS5224 — In the homozygous progeny, anthocyanin accumulation (purple coloration) in the cotelydons of developing embryos.
- CS5224 — In the homozygous progeny, dark purple seeds.
- CS5224 — Mutation is lethal in the homozygous state.
- SALK_000593 — constitutive photomorphogenesis
- fus11-U203 — In the homozygous mutant progeny, CSN3, CSN1 and CSN5 were all absent from the COP9 signalosome , although CSN5 could be found exclusively in the monomeric form.
- fus11-U203 — In the homozygous progeny, anthocyanin accumulation (purple coloration) in the cotelydons of developing embryos.
- fus11-U203 — Mutation is lethal in the homozygous state.
Functional Keywords
Literature and News
- The COP9 complex is conserved between plants and mammals and is related to the 26S proteasome regulatory complex. DOI: 10.1016/s0960-9822(07)00372-7 ; PMID: 9707402
- The COP9 signalosome: from light signaling to general developmental regulation and back. DOI: 10.1016/s1369-5266(00)00101-1 ; PMID: 11019806
- A role of Arabidopsis COP9 signalosome in multifaceted developmental processes revealed by the characterization of its subunit 3. DOI: 10.1242/dev.128.21.4277 ; PMID: 11684663
- Subunit interaction maps for the regulatory particle of the 26S proteasome and the COP9 signalosome. DOI: 10.1093/emboj/20.24.7096 ; PMID: 11742986
- Arabidopsis CULLIN4 Forms an E3 Ubiquitin Ligase with RBX1 and the CDD Complex in Mediating Light Control of Development. DOI: 10.1105/tpc.106.043224 ; PMID: 16844902
- Role of the MPN subunits in COP9 signalosome assembly and activity, and their regulatory interaction with Arabidopsis Cullin3-based E3 ligases. DOI: 10.1105/tpc.106.047571 ; PMID: 17307927
- The Arabidopsis COP9 signalosome is essential for G2 phase progression and genomic stability. DOI: 10.1242/dev.020743 ; PMID: 18434413
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- SMALL ACIDIC PROTEIN1 acts with RUB modification components, the COP9 signalosome, and AXR1 to regulate growth and development of Arabidopsis. DOI: 10.1104/pp.111.188409 ; PMID: 22576848
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- The eta7/csn3-3 auxin response mutant of Arabidopsis defines a novel function for the CSN3 subunit of the COP9 signalosome. DOI: 10.1371/journal.pone.0066578 ; PMID: 23762492
- The COP9 signalosome: from light signaling to general developmental regulation and back. DOI: 10.1016/s1369-5266(00)00101-1 ; PMID: 11019806
Gene Resources
- UniProt: F4K5I3
- EMBL: CP002688
- AlphaFoldDB: F4K5I3
- EnsemblPlants: AT5G14250.2
- Gramene: AT5G14250.2
- ExpressionAtlas: AT5G14250
Sequences
cDNA Sequence
- >AT5G14250.2
AAACAAACAGTTTAGCAAAAGATTTTGAGAGGGAGAAAAAGGGCGATCGATTAGGGTTTTTGTGTTTTCGTCTTAGTATCGAAGATGATCGGAGCTGTGAACTCGGTGGAGGCTGTGATAACGTCAATCCAAGGTTTATCGGGGAGTCCAGAGGATTTATCTGCACTTCACGATCTTTTGAGAGGAGCTCAAGACTCGCTCCGAGCCGAACCAGGTGTTAATTTCTCTACTCTTGACCAGCTCGACGCCTCGAAGCACTCTCTCGGTTACCTGTATTTCCTTGAGGTTCTTACCTGTGGTCCAGTGTCGAAGGAGAAAGCTGCTTATGAGATACCGATAATTGCACGGTTCATCAATTCTTGTGATGCTGGGCAGATTCGTTTGGCGAGCTATAAATTTGTATCTCTTTGTAAGATATTGAAAGACCATGTTATAGCACTGGGAGATCCGTTGCGAGGAGTAGGGCCACTGTTAAACGCTGTTCAGAAGCTTCAGGTCTCCTCCAAGCGTTTGACTGCATTGCATCCAGATGTTCTTCAACTCTGTTTGCAGGCGAAATCGTACAAATCTGGTTTCTCCATTCTTAGTGATGATATCGTGGAGATTGACCAGCCAAGAGACTTTTTTCTCTATAGCTATTATGGGGGAATGATTTGTATTGGACTGAAGAGATTTCAGAAAGCATTAGAGCTTCTTTACAATGTTGTGACTGCTCCTATGCATCAAGTCAATGCCATAGCTCTTGAGGCGTACAAAAAGTACATATTGGTGTCTCTCATTCACAATGGGCAGTTTACTAACACTCTCCCCAAGTGTGCTTCTACAGCAGCACAGAGGAGCTTCAAGAACTATACCGGACCTTACATTGAACTGGGTAATTGTTACAACGACGGGAAGATTGGTGAACTAGAGGCATTGGTTGTGGCCAGGAATGCAGAATTTGAAGAGGATAAGAACCTTGGATTAGTTAAGCAAGCAGTGTCATCCCTTTACAAGCGTAACATTCTGAGATTGACACAGAAGTACTTGACCCTGTCGCTTCAAGATATAGCCAACATGGTCCAACTTGGTAATGCTAAGGAGGCGGAAATGCATGTGCTTCAGATGGTATTGTGTCCCACACTTGATTTTTGGAAGCTAGCTTTATTAGTTTAACTGGTATGTTGGACAATATCATTTTTTTCTTTACAAACCTGCAGATCCAGGATGGTCAGATACATGCCCTTATCAACCAGAAAGACGGGATGGTCAGATTCTTGGAGGACCCTGAGCAGTACAAATCTAGTGAGATGATTGAGATCATGGATTCTGTTATACAAAGGACTATTGGTCTGTCGAAGAATCTCTTAGCCATGGATGAGAGCTTATCATGTGACCCTTTATACTTGGGAAAGGTAGGAAGGGAAAGACAAAGGTACGACTTTGGAGACGATTTCGATACTGTTCCTCAGAAGTTCTCCATGTAAACAGCGAAAGTCGAGAAGCACCAACAAAACTTGGCTCAAAGACAACCGTAGTGTGAATCTTGAGAATGTTACTTTTGATTTCTTTGTTCATTTTTGTTGGTTTAAAAAGTTTCATATTTTTGTCACAATTGCCAACAAGTAGAGAAGACCATTATGGACCCTCAAATCTTTTATTTCCCTTTTACTTAAAAAATTTTC - >AT5G14250.1
AAACAAACAGTTTAGCAAAAGATTTTGAGAGGGAGAAAAAGGGCGATCGATTAGGGTTTTTGTGTTTTCGTCTTAGTATCGAAGATGATCGGAGCTGTGAACTCGGTGGAGGCTGTGATAACGTCAATCCAAGGTTTATCGGGGAGTCCAGAGGATTTATCTGCACTTCACGATCTTTTGAGAGGAGCTCAAGACTCGCTCCGAGCCGAACCAGGTGTTAATTTCTCTACTCTTGACCAGCTCGACGCCTCGAAGCACTCTCTCGGTTACCTGTATTTCCTTGAGGTTCTTACCTGTGGTCCAGTGTCGAAGGAGAAAGCTGCTTATGAGATACCGATAATTGCACGGTTCATCAATTCTTGTGATGCTGGGCAGATTCGTTTGGCGAGCTATAAATTTGTATCTCTTTGTAAGATATTGAAAGACCATGTTATAGCACTGGGAGATCCGTTGCGAGGAGTAGGGCCACTGTTAAACGCTGTTCAGAAGCTTCAGGTCTCCTCCAAGCGTTTGACTGCATTGCATCCAGATGTTCTTCAACTCTGTTTGCAGGCGAAATCGTACAAATCTGGTTTCTCCATTCTTAGTGATGATATCGTGGAGATTGACCAGCCAAGAGACTTTTTTCTCTATAGCTATTATGGGGGAATGATTTGTATTGGACTGAAGAGATTTCAGAAAGCATTAGAGCTTCTTTACAATGTTGTGACTGCTCCTATGCATCAAGTCAATGCCATAGCTCTTGAGGCGTACAAAAAGTACATATTGGTGTCTCTCATTCACAATGGGCAGTTTACTAACACTCTCCCCAAGTGTGCTTCTACAGCAGCACAGAGGAGCTTCAAGAACTATACCGGACCTTACATTGAACTGGGTAATTGTTACAACGACGGGAAGATTGGTGAACTAGAGGCATTGGTTGTGGCCAGGAATGCAGAATTTGAAGAGGATAAGAACCTTGGATTAGTTAAGCAAGCAGTGTCATCCCTTTACAAGCGTAACATTCTGAGATTGACACAGAAGTACTTGACCCTGTCGCTTCAAGATATAGCCAACATGGTCCAACTTGGTAATGCTAAGGAGGCGGAAATGCATGTGCTTCAGATGGTATTGTGTCCCACACTTGATTTTTGGAAGCTAGCTTTATTAGTTTAACTGGTATGTTGGACAATATCATTTTTTTCTTTACAAACCTGCAGATCCAGGATGGTCAGATACATGCCCTTATCAACCAGAAAGACGGGATGGTCAGATTCTTGGAGGACCCTGAGCAGTACAAATCTAGTGAGATGATTGAGATCATGGATTCTGTTATACAAAGGACTATTGGTCTGTCGAAGAATCTCTTAGCCATGGATGAGAGCTTATCATGTGACCCTTTATACTTGGGAAAGGTAGGAAGGGAAAGACAAAGGTACGACTTTGGAGACGATTTCGATACTGTTCCTCAGAAGTTCTCCATGTAAACAGCGAAAGTCGAGAAGCACCAACAAAACTTGGCTCAAAGACAACCGTAGTGTGAATCTTGAGAATGTTACTTTTGATTTCTTTGTTCATTTTTGTTGGTTTAAAAAGTTTCATATTTTTGTCACAATTGCCAACAAGTAGAGAAGACCATTATGGACCCTCAAATCTTTTATTTCCCTTTTACTTAAAAAATTTTC
CDS Sequence
Protein Sequence