Information report for AT5G13990
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
- GO:0080092 — acts upstream of or within — regulation of pollen tube growth
- GO:0005546 — enables — phosphatidylinositol-4,5-bisphosphate binding
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0080092 — acts upstream of or within negative effect — regulation of pollen tube growth
- GO:0006887 — involved in — exocytosis
- GO:0000145 — part of — exocyst
- GO:0005737 — located in — cytoplasm
- GO:0005829 — located in — cytosol
- GO:0090406 — located in — pollen tube
- exo70C2-1 — Pollen tube growth is altered with respect to wild type. Mutant pollen tubes display a higher growth rate and insufficient cell wall deposition resulting in repetitive transient stops and bursts of the growing tip.
Functional Keywords
Literature and News
- Pollen development and fertilization in Arabidopsis is dependent on the MALE GAMETOGENESIS IMPAIRED ANTHERS gene encoding a type V P-type ATPase. DOI: 10.1101/gad.357305 ; PMID: 16291648
- AtEXO70A1, a member of a family of putative exocyst subunits specifically expanded in land plants, is important for polar growth and plant development. DOI: 10.1111/j.1365-313X.2006.02854.x ; PMID: 16942608
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Characterization of the Arabidopsis thaliana exocyst complex gene families by phylogenetic, expression profiling, and subcellular localization studies. DOI: 10.1111/j.1469-8137.2009.03070.x ; PMID: 19895414
- Expression and functional analyses of EXO70 genes in Arabidopsis implicate their roles in regulating cell type-specific exocytosis. DOI: 10.1104/pp.110.164178 ; PMID: 20943851
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Tethering Complexes in the Arabidopsis Endomembrane System. DOI: 10.3389/fcell.2016.00046 ; PMID: 27243010
- Regulation of Exocyst Function in Pollen Tube Growth by Phosphorylation of Exocyst Subunit EXO70C2. DOI: 10.3389/fpls.2020.609600 ; PMID: 33519861
Gene Resources
- UniProt: A0A178UPG0
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UPG0
- EnsemblPlants: AT5G13990.1
- Gramene: AT5G13990.1
- KEGG: ath:AT5G13990
- Orthologous matrix: FPQECAN
- ExpressionAtlas: AT5G13990
- InterPro: IPR004140, IPR016159, IPR046364
- PANTHER: PTHR12542, PTHR12542:SF93
- SUPFAM: SSF74788
- Gene3D: 1.20.1280.170
- OrthoDB: A0A178UPG0
- SWISS-MODEL: A0A178UPG0
Sequences
cDNA Sequence
- >AT5G13990.1
AATCGCCTCTCTAACCACAAATCCTAAAAGTCTAAACGAAAACAGAACACATGAATCTCTCCTTCCTCTGCATCTCAATTCCACTTCGCCATTTTTAAAGCTTTTTACGTAAATAATAAGAAACCATGGAGAAGAACGACAAGGACCCTGATCATGATGACAAATCCAAGGGAGATGAGAAAGGCGACGTCGTTTCGGATGCTCATCCCTCAGATGATGCGCATCATCAGGATGGTATCAGTAACGAAAATGTAGATGTTGTTGGTAATGCGGAGACAGATCATCAAGATCCAGGAGATAACAATGTCGACAAGGTTTCACAAGGAGAAGAAGCACCAGAGATTCGTCAAACCTTGGAGTCTTTGTCTGAAGAACTCGATCAGTTTCTCCCGACTCTTTCCCTTCACATGGAGGAGCACAAAGATAGCACCGAGGAGAAAGGAGAGGATGGTTACTTTCAGATCCCACAGTTTGTTGGGAAATTCTTGGATCTTTTTGAGGAAAAACTCTCCAAATATGACTCTGGTGAGCCTAAGACTGTGTGGTACCAAGATCCTGAAGAGGTGTCTTCGCTTTTGGAGGCAGTGGATCGTGTCTCAAAGCTTATGGGGCTATTGCTCAACACCAAGTCCTGTTTGGACCATCATGAGTCCTTGATCAACCATGCGGGATCTATTCAGCAGCGTGCAATGGCTTTCTTGGAAGACGAATTCCGCATCATTTTAGAAGAATCTGTGACCAAAGAGTCTGTGGTTGTCACCGATGACAGCAACAGCCAGAGGAGGAGCACTGCCGATCAGCAAGACCACCAGAACGATGTGGTGGTCTCACAAGACCACGACCAGATGCTCGTTCCGGAATGCGGTGATCAGGAGATTGAATACCCTGGTTACCCTGAGGATGTGGTTGTGGTGCTGAGGAAAATAGCGGAAAAGATGAAAGCAGGAGGGTATGGATGGGAATGTAGAGAGGTTTATTTGGTTGGGAGGAGGAACATCTTGATGCGCACTTTGAAACAAGATTGTGAGTTTGAGAAAGTTAGCATCGACGAGGTGCAGAAAATGAGCTGGGACACGCTCGAGAGAGAGATCCCTATTTGGAACAAGACTTTCAAGGACTGCTCTTCTCTCTTCTTCCCTGGTGAGCTAAAACTTGCAGAGAGGATATTCCCAGGGGACGAGGGGAACTTATTCTGTATTGTCACACACGGTCTGGCCATCCAGTTCTTAGGTTTCGCAGAGGCCGTAGCCATGACAAGGCGCTCCACTGAAAAGCTCTTCAAGATCCTCGACATCTATGAGACTCTGCGGGATAGTTTTCCGGCCATGGAGGAGCTGTTTCCGGAGGAACTCCGGAGCGAGCTGAGGAACGAGGTGACCAGTGCTCGCTCCCGACTTGGAGAGACTGCGATTCACATTTTCTGTGATCTGGAGCACTCCATCAAATCAGATTCAAGCAAGACCCCTGTGCCAGGAGGGGCAGTGCATCCATTGACGAGGTACACCATGAACTACCTCAAGTACTCGTGCGAATACAAGGACACATTGGAACAAGTGTTCAAGAGTCACTCGAAGATGGAGCGAGAGGAGGAGGAACCTGTGGAGAGCGGAAACTCGGCCTTCGCAAGCCAGCTGATGAGGATAATGGAGCTACTCGACGGAAACCTGGAGACAAAGTCAAAACAGTACAAAGACATACCATTGAGCTGCATCTTCATGATGAACAACGGGAGATACATAGTGCAGAAGATCAAAGGATCGGCGGAGATACACGAGGTGATGGGTGACACATGGTGCAGGAGGAGGTCGTCAGAGCTAAGGAACTATCACAAAAACTATCAGAGGGAGACGTGGGGGAAGCTACTGGGGTTCTTAGGGCACGAGGGGCTCATGCACAACGGCAAGATAGTCAAGCCCAATCTCAAGGAGAGGTTCAAGAGCTTCAACGCAACATTTGACGAGATACACAAGACACAGACCACATGGGTAGTCAACGACGAGCAGCTGCAGAGTGAGCTAAGGGTCTCCATAACTGCAGTCATGATACCTGCCTACAGGGCCTTCATGGCCAGGTTTGGACAGTACTTGGATCCTGGTCGCCAGACCGAGAAGTATGTCAAGTATCAGCCTGAAGATATCGAGGATCTCATCGACCAGCTCTTTGAAGGCAACACCTCCTCCTCTTCTACTGCCACCGCCAGGCGAAGAACATAGCTTCTTTCTTTTCTTCTTTTTTCTTTTGCAACAACACTTTTTCCTGATTTTCTCAAAATTTTTCATGTCTTCTTCAACTGTTTTTGTCTGAATGCCACAACTTGGATGACCC
CDS Sequence
Protein Sequence