AT5G13960

Gene Details

Gene ID: AT5G13960
Gene Symbol: KYP, SDG33, SUVH4
Gene Name: KRYPTONITE, SET DOMAIN PROTEIN 33, SU(VAR)3-9 homolog 4
Description: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein;(source:Araport11)
TAIR Accession: locus:2159133
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

GO:0044027 — acts upstream of or within — negative regulation of gene expression via CpG island methylation
GO:0018022 — acts upstream of or within — peptidyl-lysine methylation
GO:0003690 — enables — double-stranded DNA binding
GO:0010428 — enables — methyl-CpNpG binding
GO:0034968 — involved in — histone lysine methylation
GO:0046974 — enables — histone H3K9 methyltransferase activity
GO:0005515 — enables — protein binding
GO:0008270 — enables — zinc ion binding
GO:0010429 — enables — methyl-CpNpN binding
GO:0016571 — involved in — histone methylation
GO:0042054 — enables — histone methyltransferase activity
GO:0008327 — enables — methyl-CpG binding
GO:0010385 — enables — double-stranded methylated DNA binding
GO:0005634 — located in — nucleus

CS16385 — No visible phenotype.
CS16388 — Reduced plant size; curled leaves.
CS6367 — The kyp-2 mutant has defects in callus formation under laboratory conditions. Many fewer seeds form calluses compared to wild type seeds, and the calluses that do form are delayed and smaller in size. kyp-2 mutants are defective in the process known as alternative lengthening of telomeres, a telomerase-independent process. These mutants also show a loss of association between K9-dimethylated H3 histones and telomeric and centromeric DNA via ChIP assays.
CS6367 — Wild type morphology; lacks the cytosine methylation at sites of CpNpG trinucleotides (where N is A, C, G or T); low level of expression of two retrotransposon-related sequences (Athila and Ta3 sequences); suppresses the clark kent allele clk-3; lacks trichomes on stems and leaves.
SALK_105816C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:increased,oxidative stress:no change,osmotic stress:decreased,salt stress:no change,ABA:no change,hypoxia:no change.
kyp-1 — Loss of cytosine methylation, reactivation of endogenous transposons
kyp-3 — Phenotype not described.
kyp-5 — Decreasein amounts of H3K9me2 in chromocenters
suvh4E341K — No visible phenotype.
suvh4R260H — No visible phenotype.
suvh4R302* — No visible phenotype.
suvh4S200F — No visible phenotype.
suvh4W563* — No visible phenotype.

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT5G13960.2
GAAAAGTTGAAATCGCCGGGAAAGAAAGAGGACAAACATTTATTTCGTGTCTACTTTCCTCCTTGAAATAAAAAAAGAATTAATTATACCAAAAAAAAGAGGAGAAAAAAAAAACTCTCATCTTCGTCGTCTTCACAGTTTCAATCTCGCGCTGCTTAGTCTCCTTCCGTCTCTTCTTCTCCGCTAGCTTTTCCAGGGGAAAAAGAGTGATCGATGGCTGGAAAAAGGAAACGAGCTAATGCTCCTGACCAAACAGAGCGAAGATCGAGTGTTCGGGTTCAGAAAGTGAGACAGAAAGCGTTAGATGAGAAGGCGCGTTTAGTACAGGAGAGGGTTAAGCTCCTCAGTGACAGAAAGAGTGAAATTTGTGTCGATGACACTGAGTTACATGAGAAAGAAGAGGAAAATGTCGATGGGAGCCCTAAACGAAGAAGCCCTCCAAAGCTAACCGCAATGCAGAAAGGAAAGCAGAAATTGAGTGTTTCTCTGAATGGTAAGGACGTGAACTTGGAACCTCATCTCAAAGTGACAAAGTGTCTGAGGTTATTTAACAAGCAATATCTCCTCTGTGTCCAGGCTAAGTTGAGCAGGCCTGATTTGAAGGGTGTAACTGAGGCAAGTCATGATTTTTCTTACCTCTGGCCTTAGTTGCCTCATGCAACATTGTTTTGTCTATCAAGAAATGGAAGATGTCACAATGTTTTGTTAAGCAACATGTATCATTATACTTTGTGTTCTTGTAAATATGATGGTTTGTCTATTCTGTAATCTTCAATGCAAGTTGACTTAAGCCTTTAAGAAAATTTCCAGATGATAAAAGCTAAGGCGATATTGTACCCAAGAAAAATAATCGGTGACCTTCCAGGTATAGACGTTGGACACCGTTTTTTTTCAAGAGCTGAAATGTGTGCTGTAGGATTCCATAACCATTGGCTAAATGGCATTGATTATATGTCAATGGAATACGAAAAAGAGTATAGTAACTACAAATTACCGCTTGCTGTTTCTATTGTTATGTCGGGCCAGTACGAGGATGATCTAGACAATGCAGATACAGTGACTTACACTGGACAGGGAGGGCATAACTTAACTGGTAATAAACGTCAGATAAAGGATCAACTTTTAGAACGAGGGAATTTGGCGCTAAAGCACTGCTGCGAATATAATGTGCCTGTCAGAGTAACTCGTGGTCACAATTGCAAAAGTAGCTATACCAAACGAGTATACACTTATGATGGACTGTACAAGGTTGAAAAGTTCTGGGCACAAAAGGGCGTTTCAGGATTTACAGTGTATAAGTACCGACTGAAACGATTGGAGGGGCAACCAGAACTAACTACTGATCAGGTCAACTTTGTTGCTGGACGCATACCAACGAGTACTTCAGAAATTGAGGGTTTGGTATGTGAGGACATCTCCGGAGGGCTAGAATTTAAGGGTATCCCCGCCACTAATCGTGTTGATGATTCACCAGTTTCACCAACATCTGGTTTCACATACATCAAATCTTTGATTATTGAGCCTAATGTCATAATTCCAAAGAGTTCAACTGGGTGTAACTGCCGAGGCAGCTGCACTGACTCAAAGAAATGTGCATGTGCTAAGCTTAATGGGGGTAACTTTCCATATGTTGACCTTAATGATGGCAGATTAATTGAGTCTCGAGATGTTGTATTTGAATGTGGTCCTCACTGTGGGTGTGGGCCAAAATGTGTCAACCGAACTTCTCAGAAGCGTCTAAGATTCAATCTTGAGGTTTTCCGCTCTGCAAAGAAGGGTTGGGCAGTTAGATCATGGGAGTACATACCAGCTGGTTCACCAGTATGTGAGTACATAGGAGTTGTCAGGAGAACTGCTGATGTGGATACTATCTCTGACAATGAATACATATTTGAGATTGACTGCCAACAGACAATGCAAGGTCTTGGTGGAAGACAGAGAAGACTAAGAGATGTTGCTGTACCAATGAATAATGGAGTCAGTCAGAGCAGTGAAGATGAGAATGCGCCAGAGTTCTGCATTGATGCTGGTTCAACAGGAAACTTTGCTAGGTTTATAAATCACAGTTGTGAACCAAACCTATTTGTTCAGTGCGTCCTGAGTTCTCACCAGGATATAAGGCTTGCCCGTGTGGTTCTTTTCGCAGCTGACAACATTTCCCCAATGCAGGAGCTCACTTACGACTATGGATATGCGCTTGATAGCGTTCATGGACCGGATGGGAAGGTGAAGCAGCTCGCTTGCTACTGTGGAGCGCTAAATTGTAGGAAACGCCTTTACTAACAAAGGCTATTGGTGAACTTATTTTTTGGTCACTCTATTTTGGGGAGTACATAGATAGCAACTATCTCCCAAGTGGAAGAACCCTTCACATTTTATTTAAGGGACTTTAGCTTCTTCTGCAGCGTACGTGCTGCCTTTTTCGGCATTGTTGTTTCCTGAATTCTATTGTTGCCATTGGCATCTTATCTATCGGGTCAACAATATTAATCATCTCTTTTTCTTATTTGC
>AT5G13960.1
GAAAAGTTGAAATCGCCGGGAAAGAAAGAGGACAAACATTTATTTCGTGTCTACTTTCCTCCTTGAAATAAAAAAAGAATTAATTATACCAAAAAAAAGAGGAGAAAAAAAAAACTCTCATCTTCGTCGTCTTCACAGTTTCAATCTCGCGCTGCTTAGTCTCCTTCCGTCTCTTCTTCTCCGCTAGCTTTTCCAGGGGAAAAAGAGTGATCGATGGCTGGAAAAAGGAAACGAGCTAATGCTCCTGACCAAACAGAGCGAAGATCGAGTGTTCGGGTTCAGAAAGTGAGACAGAAAGCGTTAGATGAGAAGGCGCGTTTAGTACAGGAGAGGGTTAAGCTCCTCAGTGACAGAAAGAGTGAAATTTGTGTCGATGACACTGAGTTACATGAGAAAGAAGAGGAAAATGTCGATGGGAGCCCTAAACGAAGAAGCCCTCCAAAGCTAACCGCAATGCAGAAAGGAAAGCAGAAATTGAGTGTTTCTCTGAATGGTAAGGACGTGAACTTGGAACCTCATCTCAAAGTGACAAAGTGTCTGAGGTTATTTAACAAGCAATATCTCCTCTGTGTCCAGGCTAAGTTGAGCAGGCCTGATTTGAAGGGTGTAACTGAGGCAAGTCATGATTTTTCTTACCTCTGGCCTTAGTTGCCTCATGCAACATTGTTTTGTCTATCAAGAAATGGAAGATGTCACAATGTTTTGTTAAGCAACATGTATCATTATACTTTGTGTTCTTGTAAATATGATGGTTTGTCTATTCTGTAATCTTCAATGCAAGTTGACTTAAGCCTTTAAGAAAATTTCCAGATGATAAAAGCTAAGGCGATATTGTACCCAAGAAAAATAATCGGTGACCTTCCAGGTATAGACGTTGGACACCGTTTTTTTTCAAGAGCTGAAATGTGTGCTGTAGGATTCCATAACCATTGGCTAAATGGCATTGATTATATGTCAATGGAATACGAAAAAGAGTATAGTAACTACAAATTACCGCTTGCTGTTTCTATTGTTATGTCGGGCCAGTACGAGGATGATCTAGACAATGCAGATACAGTGACTTACACTGGACAGGGAGGGCATAACTTAACTGGTAATAAACGTCAGATAAAGGATCAACTTTTAGAACGAGGGAATTTGGCGCTAAAGCACTGCTGCGAATATAATGTGCCTGTCAGAGTAACTCGTGGTCACAATTGCAAAAGTAGCTATACCAAACGAGTATACACTTATGATGGACTGTACAAGGTTGAAAAGTTCTGGGCACAAAAGGGCGTTTCAGGATTTACAGTGTATAAGTACCGACTGAAACGATTGGAGGGGCAACCAGAACTAACTACTGATCAGGTCAACTTTGTTGCTGGACGCATACCAACGAGTACTTCAGAAATTGAGGGTTTGGTATGTGAGGACATCTCCGGAGGGCTAGAATTTAAGGGTATCCCCGCCACTAATCGTGTTGATGATTCACCAGTTTCACCAACATCTGGTTTCACATACATCAAATCTTTGATTATTGAGCCTAATGTCATAATTCCAAAGAGTTCAACTGGGTGTAACTGCCGAGGCAGCTGCACTGACTCAAAGAAATGTGCATGTGCTAAGCTTAATGGGGGTAACTTTCCATATGTTGACCTTAATGATGGCAGATTAATTGAGTCTCGAGATGTTGTATTTGAATGTGGTCCTCACTGTGGGTGTGGGCCAAAATGTGTCAACCGAACTTCTCAGAAGCGTCTAAGATTCAATCTTGAGGTTTTCCGCTCTGCAAAGAAGGGTTGGGCAGTTAGATCATGGGAGTACATACCAGCTGGTTCACCAGTATGTGAGTACATAGGAGTTGTCAGGAGAACTGCTGATGTGGATACTATCTCTGACAATGAATACATATTTGAGATTGACTGCCAACAGACAATGCAAGGTCTTGGTGGAAGACAGAGAAGACTAAGAGATGTTGCTGTACCAATGAATAATGGAGTCAGTCAGAGCAGTGAAGATGAGAATGCGCCAGAGTTCTGCATTGATGCTGGTTCAACAGGAAACTTTGCTAGGTTTATAAATCACAGTTGTGAACCAAACCTATTTGTTCAGTGCGTCCTGAGTTCTCACCAGGATATAAGGCTTGCCCGTGTGGTTCTTTTCGCAGCTGACAACATTTCCCCAATGCAGGAGCTCACTTACGACTATGGATATGCGCTTGATAGCGTTCATGGACCGGATGGGAAGGTGAAGCAGCTCGCTTGCTACTGTGGAGCGCTAAATTGTAGGAAACGCCTTTACTAACAAAGGCTATTGGTGAACTTATTTTTTGGTCACTCTATTTTGGGGAGTACATAGATAGCAACTATCTCCCAAGTGGAAGAACCCTTCACATTTTATTTAAGGGACTTTAGCTTCTTCTGCAGCGTACGTGCTGCCTTTTTCGGCATTGTTGTTTCCTGAATTCTATTGTTGCCATTGGCATCTTATCTATCGGGTCAACAATATTAATCATCTCTTTTTCTTATTTGC

CDS Sequence

Protein Sequence