Information report for AT5G13870
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- PO:0009067 — filament — filamento (Spanish, exact), 花糸 (Japanese, exact), Poaceae filament (narrow), Zea filament (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- GO:0010411 — involved in — xyloglucan metabolic process
- GO:0004553 — enables — hydrolase activity, hydrolyzing O-glycosyl compounds
- GO:0030247 — enables — polysaccharide binding
- GO:0005576 — located in — extracellular region
- GO:0042546 — involved in — cell wall biogenesis
- GO:0016762 — enables — xyloglucan:xyloglucosyl transferase activity
- CS860812 — No visible phenotype.
Literature and News
- Expression of endoxyloglucan transferase genes in acaulis mutants of Arabidopsis. DOI: 10.1104/pp.121.3.715 ; PMID: 10557219
- A comprehensive expression analysis of all members of a gene family encoding cell-wall enzymes allowed us to predict cis-regulatory regions involved in cell-wall construction in specific organs of Arabidopsis. DOI: 10.1093/pcp/pce154 ; PMID: 11673616
- A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and development. DOI: 10.1073/pnas.152337599 ; PMID: 12119417
- The XTH family of enzymes involved in xyloglucan endotransglucosylation and endohydrolysis: current perspectives and a new unifying nomenclature. DOI: 10.1093/pcp/pcf171 ; PMID: 12514239
- BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. DOI: 10.1016/s0092-8674(02)00721-3 ; PMID: 12007405
- Gibberellin biosynthesis and response during Arabidopsis seed germination. DOI: 10.1105/tpc.011650 ; PMID: 12837949
- Isolation and characterization of flower-specific transcripts in Acacia mangium. DOI: 10.1093/treephys/25.2.167 ; PMID: 15574398
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Gene expression profiles of Arabidopsis Cvi seeds during dormancy cycling indicate a common underlying dormancy control mechanism. DOI: 10.1111/j.1365-313X.2006.02738.x ; PMID: 16709196
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- Seed germination of GA-insensitive sleepy1 mutants does not require RGL2 protein disappearance in Arabidopsis. DOI: 10.1105/tpc.106.048009 ; PMID: 17384169
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Light quality-mediated petiole elongation in Arabidopsis during shade avoidance involves cell wall modification by xyloglucan endotransglucosylase/hydrolases. DOI: 10.1104/pp.110.162057 ; PMID: 20688978
Gene Resources
- UniProt: Q67Z90
- EMBL: AK176228
- AlphaFoldDB: Q67Z90
- EnsemblPlants: AT5G13870.1, AT5G13870.2, AT5G13870.3
- Gramene: AT5G13870.1, AT5G13870.2, AT5G13870.3
- KEGG: ath:AT5G13870
- Orthologous matrix: RQRFTIY
- ExpressionAtlas: AT5G13870
Sequences
cDNA Sequence
- >AT5G13870.3
CAGGGGCCGTTCTTTTGTTCCGTTTAACGACATCGTTTCGTCTTTCCCCTCCTTCTCCCGTTCTCCGGTCCTCATGCCTGCCGGAATCAGCTGTATTGCTCTCTGTGTTTCTGTCCATGGTGAATCGCACATGCTTCTTCAAGTCATGTGATGATGTCTCTGTTGTAGCCATCCTCTTGAAACTTGAACCTTTTTGGTTTGTTTTTTGCCAAATCTATCTTTACTGAGTTATTATTCCAATTATCAGGTCGGTTTGGACTCTCAATGGAGAGTGTGGAAGCTTCCAAGCAAATATGGTGGTATCTGGTGTCAAATAGTGTTTCTTTATTATCTTCTGCCCATAGATCTTAAACGTAAAAGCATCCAAAGATGCATTAATTAACGATAACATGGGGATGAGGTCCATGTGCCTCTGCAACACCTCTTATGCAATCACATTCTCTTGCTTCCCTAAGTTACTGCTGCCAACATTGAAAGAAACACAAAGTGCAGTGATTTTAATAATCAAATATTATGTTAAGACGTAAGAGCAAGCTGATTGATGGCTATAAATAGAAATGTCCGCATAGTGTTTGTTTGGTGTGATCAGAGTGAGAATGGGTCGTCTTTCATCAACTCTCTGCCTCACGTTTCTGATTTTGGCCACAGTTGCATTTGGTGTACCTCCTAAAAAGTCCATTAATGTTCCATTTGGGAGGAACTACTTCCCCACTTGGGCTTTTGATCACATTAAGTATCTCAATGGTGGTTCTGAAGTGCATCTTGTCCTCGACAAGTACACTGGCACTGGCTTTCAGTCCAAAGGTTCCTACTTGTTTGGCCACTTCAGTATGCACATAAAGATGGTTGCTGGTGACTCTGCTGGAACTGTGACCGCCTTCTATTTGTCGTCCCAGAACTCAGAACATGATGAGATAGACTTTGAGTTTCTAGGGAACAGAACTGGCCAGCCTTACATTTTGCAGACTAACGTGTTTACAGGAGGCGCCGGAAACCGTGAGCAACGAATCAACCTCTGGTTTGATCCTTCCAAGGACTATCATTCCTATTCAGTTCTCTGGAACATGTATCAGATTGTGTTCTTTGTGGATGATGTGCCGATACGAGTGTTCAAGAATAGCAAAGACGTTGGGGTGAAGTTTCCATTCAACCAACCAATGAAGATATATTCGAGTCTGTGGAATGCAGACGACTGGGCCACAAGGGGAGGGTTGGAGAAGACCAACTGGGAAAAAGCTCCTTTTGTCGCGTCCTACAGAGGCTTCCACGTCGATGGATGTGAAGCTTCAGTAAATGCTAAGTTCTGCGAGACGCAGGGAAAACGTTGGTGGGATCAGAAAGAGTTCCAGGACTTGGACGCTAACCAGTACAAGCGTCTCAAATGGGTTCGTAAGAGATACACCATCTACAACTATTGCACTGACCGCGTCCGATTTCCCGTACCTCCTCCAGAGTGCCGCAGAGACCGCGACATATAGTGATTTTTCAGATTTTATCTAGATTGTTTTCCCACTGTATGACAATATTTCCTACTTTTGTAATGTTTATTCTTCTTATTACAATTTAATCTAGAAAAGTTTGGATTGTTTACAAACTAAAAGTAACTTAAAGTGAAACCGAGAATATGAATTCATAAGTTTCCCTG - >AT5G13870.1
CAGGGGCCGTTCTTTTGTTCCGTTTAACGACATCGTTTCGTCTTTCCCCTCCTTCTCCCGTTCTCCGGTCCTCATGCCTGCCGGAATCAGCTGTATTGCTCTCTGTGTTTCTGTCCATGGTGAATCGCACATGCTTCTTCAAGTCATGTGATGATGTCTCTGTTGTAGCCATCCTCTTGAAACTTGAACCTTTTTGGTTTGTTTTTTGCCAAATCTATCTTTACTGAGTTATTATTCCAATTATCAGGTCGGTTTGGACTCTCAATGGAGAGTGTGGAAGCTTCCAAGCAAATATGGTGGTATCTGGTGTCAAATAGTGTTTCTTTATTATCTTCTGCCCATAGATCTTAAACGTAAAAGCATCCAAAGATGCATTAATTAACGATAACATGGGGATGAGGTCCATGTGCCTCTGCAACACCTCTTATGCAATCACATTCTCTTGCTTCCCTAAGTTACTGCTGCCAACATTGAAAGAAACACAAAGTGCAGTGATTTTAATAATCAAATATTATGTTAAGACGTAAGAGCAAGCTGATTGATGGCTATAAATAGAAATGTCCGCATAGTGTTTGTTTGGTGTGATCAGAGTGAGAATGGGTCGTCTTTCATCAACTCTCTGCCTCACGTTTCTGATTTTGGCCACAGTTGCATTTGGTGTACCTCCTAAAAAGTCCATTAATGTTCCATTTGGGAGGAACTACTTCCCCACTTGGGCTTTTGATCACATTAAGTATCTCAATGGTGGTTCTGAAGTGCATCTTGTCCTCGACAAGTACACTGGCACTGGCTTTCAGTCCAAAGGTTCCTACTTGTTTGGCCACTTCAGTATGCACATAAAGATGGTTGCTGGTGACTCTGCTGGAACTGTGACCGCCTTCTATTTGTCGTCCCAGAACTCAGAACATGATGAGATAGACTTTGAGTTTCTAGGGAACAGAACTGGCCAGCCTTACATTTTGCAGACTAACGTGTTTACAGGAGGCGCCGGAAACCGTGAGCAACGAATCAACCTCTGGTTTGATCCTTCCAAGGACTATCATTCCTATTCAGTTCTCTGGAACATGTATCAGATTGTGTTCTTTGTGGATGATGTGCCGATACGAGTGTTCAAGAATAGCAAAGACGTTGGGGTGAAGTTTCCATTCAACCAACCAATGAAGATATATTCGAGTCTGTGGAATGCAGACGACTGGGCCACAAGGGGAGGGTTGGAGAAGACCAACTGGGAAAAAGCTCCTTTTGTCGCGTCCTACAGAGGCTTCCACGTCGATGGATGTGAAGCTTCAGTAAATGCTAAGTTCTGCGAGACGCAGGGAAAACGTTGGTGGGATCAGAAAGAGTTCCAGGACTTGGACGCTAACCAGTACAAGCGTCTCAAATGGGTTCGTAAGAGATACACCATCTACAACTATTGCACTGACCGCGTCCGATTTCCCGTACCTCCTCCAGAGTGCCGCAGAGACCGCGACATATAGTGATTTTTCAGATTTTATCTAGATTGTTTTCCCACTGTATGACAATATTTCCTACTTTTGTAATGTTTATTCTTCTTATTACAATTTAATCTAGAAAAGTTTGGATTGTTTACAAACTAAAAGTAACTTAAAGTGAAACCGAGAATATGAATTCATAAGTTTCCCTG - >AT5G13870.2
CAGGGGCCGTTCTTTTGTTCCGTTTAACGACATCGTTTCGTCTTTCCCCTCCTTCTCCCGTTCTCCGGTCCTCATGCCTGCCGGAATCAGCTGTATTGCTCTCTGTGTTTCTGTCCATGGTGAATCGCACATGCTTCTTCAAGTCATGTGATGATGTCTCTGTTGTAGCCATCCTCTTGAAACTTGAACCTTTTTGGTTTGTTTTTTGCCAAATCTATCTTTACTGAGTTATTATTCCAATTATCAGGTCGGTTTGGACTCTCAATGGAGAGTGTGGAAGCTTCCAAGCAAATATGGTGGTATCTGGTGTCAAATAGTGTTTCTTTATTATCTTCTGCCCATAGATCTTAAACGTAAAAGCATCCAAAGATGCATTAATTAACGATAACATGGGGATGAGGTCCATGTGCCTCTGCAACACCTCTTATGCAATCACATTCTCTTGCTTCCCTAAGTTACTGCTGCCAACATTGAAAGAAACACAAAGTGCAGTGATTTTAATAATCAAATATTATGTTAAGACGTAAGAGCAAGCTGATTGATGGCTATAAATAGAAATGTCCGCATAGTGTTTGTTTGGTGTGATCAGAGTGAGAATGGGTCGTCTTTCATCAACTCTCTGCCTCACGTTTCTGATTTTGGCCACAGTTGCATTTGGTGTACCTCCTAAAAAGTCCATTAATGTTCCATTTGGGAGGAACTACTTCCCCACTTGGGCTTTTGATCACATTAAGTATCTCAATGGTGGTTCTGAAGTGCATCTTGTCCTCGACAAGTACACTGGCACTGGCTTTCAGTCCAAAGGTTCCTACTTGTTTGGCCACTTCAGTATGCACATAAAGATGGTTGCTGGTGACTCTGCTGGAACTGTGACCGCCTTCTATTTGTCGTCCCAGAACTCAGAACATGATGAGATAGACTTTGAGTTTCTAGGGAACAGAACTGGCCAGCCTTACATTTTGCAGACTAACGTGTTTACAGGAGGCGCCGGAAACCGTGAGCAACGAATCAACCTCTGGTTTGATCCTTCCAAGGACTATCATTCCTATTCAGTTCTCTGGAACATGTATCAGATTGTGTTCTTTGTGGATGATGTGCCGATACGAGTGTTCAAGAATAGCAAAGACGTTGGGGTGAAGTTTCCATTCAACCAACCAATGAAGATATATTCGAGTCTGTGGAATGCAGACGACTGGGCCACAAGGGGAGGGTTGGAGAAGACCAACTGGGAAAAAGCTCCTTTTGTCGCGTCCTACAGAGGCTTCCACGTCGATGGATGTGAAGCTTCAGTAAATGCTAAGTTCTGCGAGACGCAGGGAAAACGTTGGTGGGATCAGAAAGAGTTCCAGGACTTGGACGCTAACCAGTACAAGCGTCTCAAATGGGTTCGTAAGAGATACACCATCTACAACTATTGCACTGACCGCGTCCGATTTCCCGTACCTCCTCCAGAGTGCCGCAGAGACCGCGACATATAGTGATTTTTCAGATTTTATCTAGATTGTTTTCCCACTGTATGACAATATTTCCTACTTTTGTAATGTTTATTCTTCTTATTACAATTTAATCTAGAAAAGTTTGGATTGTTTACAAACTAAAAGTAACTTAAAGTGAAACCGAGAATATGAATTCATAAGTTTCCCTG
CDS Sequence
Protein Sequence