Information report for AT5G13800
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0015996 — acts upstream of or within — chlorophyll catabolic process
- GO:0080124 — enables — pheophytinase activity
- GO:0005634 — located in — nucleus
- GO:0009507 — located in — chloroplast
- GO:0005515 — enables — protein binding
- GO:0015996 — involved in — chlorophyll catabolic process
- GO:0009507 — is active in — chloroplast
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response. DOI: 10.1093/jxb/eri179 ; PMID: 15911562
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- 7-Hydroxymethyl chlorophyll a reductase functions in metabolic channeling of chlorophyll breakdown intermediates during leaf senescence. DOI: 10.1016/j.bbrc.2012.11.050 ; PMID: 23200839
- Mutation of the Arabidopsis NAC016 transcription factor delays leaf senescence. DOI: 10.1093/pcp/pct113 ; PMID: 23926065
- Chlorophyll degradation: the tocopherol biosynthesis-related phytol hydrolase in Arabidopsis seeds is still missing. DOI: 10.1104/pp.114.243709 ; PMID: 25059706
- A NAP-AAO3 regulatory module promotes chlorophyll degradation via ABA biosynthesis in Arabidopsis leaves. DOI: 10.1105/tpc.114.133769 ; PMID: 25516602
- Suppressor of Overexpression of CO 1 Negatively Regulates Dark-Induced Leaf Degreening and Senescence by Directly Repressing Pheophytinase and Other Senescence-Associated Genes in Arabidopsis. DOI: 10.1104/pp.16.01457 ; PMID: 28096189
- Multiple intramolecular trafficking signals in RESISTANCE TO POWDERY MILDEW 8.2 are engaged in activation of cell death and defense. DOI: 10.1111/tpj.14199 ; PMID: 30552775
- Fibrillin2 in chloroplast plastoglobules participates in photoprotection and jasmonate-induced senescence. DOI: 10.1093/plphys/kiac166 ; PMID: 35404409
- Shade represses photosynthetic genes by disrupting the DNA binding of GOLDEN2-LIKE1. DOI: 10.1093/plphys/kiad029 ; PMID: 36702576
Gene Resources
- UniProt: A0A1P8BAD5
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BAD5
- EnsemblPlants: AT5G13800.4
- Gramene: AT5G13800.4
- Orthologous matrix: WREQVEY
- ExpressionAtlas: AT5G13800
- InterPro: IPR000073, IPR029058, IPR044211
- PANTHER: PTHR47280, PTHR47280:SF1
- SUPFAM: SSF53474
- Gene3D: 3.40.50.1820
- SWISS-MODEL: A0A1P8BAD5
Sequences
cDNA Sequence
- >AT5G13800.4
CTTTAAGAAAAAATAAAAACTCGATAAAAACGTTGCTGTCGGTTTGCACCGAACGATTGAAGTTAACCAAGCCAGCAAGCAACCCAATTCTTCTATTTCTTCTTCACCTTTAGATTTTTCCTCGCTTAATTTCTCAATAACGCTCTCAGAGAGACCATTTGATGAAGCTTCTCGCTTCTGGAATTTGAAAAGGATTTGATAAGACGAGTTCATAGAAGATTACCGCAAGTTCATCAACTTTTTGAACTTGTTATGGAGATAATCTCACTGAACGTTGTGCCCCAGTGCTCTGTGGTTACTTGGAGTAGTAAATTAGCAACGAAAAGATTGGTCCCAAATCGGTCAAGTTTGTTATTCTCAGGGGTCAAAAAATCCAGACTTGTGATTCGAAGTGGAAATTCCGATGGTTATGTTGTTGGTGAGAATGATGACTTGGGTCGTATAGCCAGAAGAGGAGAATCAACGTCAAAGGTTTTGATTCCTGGTTTGCCTGATGAATCAAATGGTGAAATTGCTGCTCGAATCAGTCATTCTCACTGCGAGTGGAAGCCCAAGCTTAGAGTACATTATGAGAAAGCCGGTTGTGACAATCTCGATGCTCCTGCGGTGTTGTTTCTTCCTGGCTTTGGCGTTGGTTCATTTCACTATGAGAAGCAGCTTACCGATTTGGGAAGGGATTATCGAGTATGGGCTATTGATTTTCTTGGACAGGGTTTATCTCTCCCTACTGAAGATCCTACTACCATGACTGAAGAAACCAGTTCCTCGGAAGATAAGGAACCATTTTGGGGATTTGGTGACAAAACTGAACCGTGGGCTGATCAACTTGTATTCTCTCTGGATCTCTGGAGGGATCAAGTTCAGTATTTTGTAGAAGAGGTTATCGGTGAGCCTGTGTACATTGCAGGGAACTCACTTGGAGGGTATGTAGCTCTCTACTTTGCAGCAACCCATCCTCACCTGGTTAAGGGTGTTACCTTGCTTAATGCAACACCTTTCTGGGGTTTCTTCCCTAATCCAGTAAGATCCCCAAAGCTAGCACGTCTCTTTCCATGGCCCGGAGCATTCCCTCTGCCGGAAAGAGTGAAAAAAATCACAGAATTGGTGTGGCAAAAGATAAGTGATCCTGAAAGCATAGCTGAGATACTTAAACAGGTCTACACAGACCATTCTATCAATGTGGATAAAGTATTCTCACGTATTGTGGAGGTCACACAGCATCCGGCTGCTGCAGCATCGTTTGCTTCAATCATGCTTGCTCCTGGTGGAGAGCTATCTTTCTCCGAAGCTTTATCTAGGTGTAAGGAAAACAATGTTCAGATATGTCTCATGTATGGAAGAGAAGATCCATGGGTGAGACCGTTATGGGGAAAGAAGATAAAGAAGGAAATCCCCAACGCTCCATACTACGAGATCAGCCCAGCGGGTCACTGCCCACACGATGAAGTCCCTGAGGTATAATGAACTAGTCAATAAATTCTTCAAACTCTGCAATTAGGTATAATGAACCCACCATTTGGGATATGAAAACGAGCAGGTGGTGAACTATCTGATGCGCGGGTGGATCAAGCACCTGGAGTCTGGTGGTTTTGAAGCGCTCCCGCTTTTGGAGGACACTGAAGAAGATTGGGAGGAGTCCAGGATTGGTAGAGAAATTGAGTTCCCGAGAGATGGTTGGAAAAAAGCAGTGAATCTGTGGTTATATGGGTCAAACTATACGTACTGGAGAGGAGTTAGAGAATCTTTCAGATCCAGTTTTATAAGGGTGTTTGGAGGGAAGTCTGCATAGAAGAAGCATGGAACAGTCGTCTAGTGTAAATTAATTGTAATCTATGTTGCATCCGATGCTAGCTATATAATGTTGTCTGTAGAATCAAGTTTCTAAAATGTTCAAAAGGAAAAGTTAGAAAAATATCTACTTGATAGTTAGTCACCTAAATCGAAGGAACTCCTTTCTTGCATTGTTGTATATAATCCACAGGTTCAGATTAATATAGGAAGGCGACATTGCAGGC - >AT5G13800.3
CTTTAAGAAAAAATAAAAACTCGATAAAAACGTTGCTGTCGGTTTGCACCGAACGATTGAAGTTAACCAAGCCAGCAAGCAACCCAATTCTTCTATTTCTTCTTCACCTTTAGATTTTTCCTCGCTTAATTTCTCAATAACGCTCTCAGAGAGACCATTTGATGAAGCTTCTCGCTTCTGGAATTTGAAAAGGATTTGATAAGACGAGTTCATAGAAGATTACCGCAAGTTCATCAACTTTTTGAACTTGTTATGGAGATAATCTCACTGAACGTTGTGCCCCAGTGCTCTGTGGTTACTTGGAGTAGTAAATTAGCAACGAAAAGATTGGTCCCAAATCGGTCAAGTTTGTTATTCTCAGGGGTCAAAAAATCCAGACTTGTGATTCGAAGTGGAAATTCCGATGGTTATGTTGTTGGTGAGAATGATGACTTGGGTCGTATAGCCAGAAGAGGAGAATCAACGTCAAAGGTTTTGATTCCTGGTTTGCCTGATGAATCAAATGGTGAAATTGCTGCTCGAATCAGTCATTCTCACTGCGAGTGGAAGCCCAAGCTTAGAGTACATTATGAGAAAGCCGGTTGTGACAATCTCGATGCTCCTGCGGTGTTGTTTCTTCCTGGCTTTGGCGTTGGTTCATTTCACTATGAGAAGCAGCTTACCGATTTGGGAAGGGATTATCGAGTATGGGCTATTGATTTTCTTGGACAGGGTTTATCTCTCCCTACTGAAGATCCTACTACCATGACTGAAGAAACCAGTTCCTCGGAAGATAAGGAACCATTTTGGGGATTTGGTGACAAAACTGAACCGTGGGCTGATCAACTTGTATTCTCTCTGGATCTCTGGAGGGATCAAGTTCAGTATTTTGTAGAAGAGGTTATCGGTGAGCCTGTGTACATTGCAGGGAACTCACTTGGAGGGTATGTAGCTCTCTACTTTGCAGCAACCCATCCTCACCTGGTTAAGGGTGTTACCTTGCTTAATGCAACACCTTTCTGGGGTTTCTTCCCTAATCCAGTAAGATCCCCAAAGCTAGCACGTCTCTTTCCATGGCCCGGAGCATTCCCTCTGCCGGAAAGAGTGAAAAAAATCACAGAATTGGTGTGGCAAAAGATAAGTGATCCTGAAAGCATAGCTGAGATACTTAAACAGGTCTACACAGACCATTCTATCAATGTGGATAAAGTATTCTCACGTATTGTGGAGGTCACACAGCATCCGGCTGCTGCAGCATCGTTTGCTTCAATCATGCTTGCTCCTGGTGGAGAGCTATCTTTCTCCGAAGCTTTATCTAGGTGTAAGGAAAACAATGTTCAGATATGTCTCATGTATGGAAGAGAAGATCCATGGGTGAGACCGTTATGGGGAAAGAAGATAAAGAAGGAAATCCCCAACGCTCCATACTACGAGATCAGCCCAGCGGGTCACTGCCCACACGATGAAGTCCCTGAGGTATAATGAACTAGTCAATAAATTCTTCAAACTCTGCAATTAGGTATAATGAACCCACCATTTGGGATATGAAAACGAGCAGGTGGTGAACTATCTGATGCGCGGGTGGATCAAGCACCTGGAGTCTGGTGGTTTTGAAGCGCTCCCGCTTTTGGAGGACACTGAAGAAGATTGGGAGGAGTCCAGGATTGGTAGAGAAATTGAGTTCCCGAGAGATGGTTGGAAAAAAGCAGTGAATCTGTGGTTATATGGGTCAAACTATACGTACTGGAGAGGAGTTAGAGAATCTTTCAGATCCAGTTTTATAAGGGTGTTTGGAGGGAAGTCTGCATAGAAGAAGCATGGAACAGTCGTCTAGTGTAAATTAATTGTAATCTATGTTGCATCCGATGCTAGCTATATAATGTTGTCTGTAGAATCAAGTTTCTAAAATGTTCAAAAGGAAAAGTTAGAAAAATATCTACTTGATAGTTAGTCACCTAAATCGAAGGAACTCCTTTCTTGCATTGTTGTATATAATCCACAGGTTCAGATTAATATAGGAAGGCGACATTGCAGGC - >AT5G13800.1
CTTTAAGAAAAAATAAAAACTCGATAAAAACGTTGCTGTCGGTTTGCACCGAACGATTGAAGTTAACCAAGCCAGCAAGCAACCCAATTCTTCTATTTCTTCTTCACCTTTAGATTTTTCCTCGCTTAATTTCTCAATAACGCTCTCAGAGAGACCATTTGATGAAGCTTCTCGCTTCTGGAATTTGAAAAGGATTTGATAAGACGAGTTCATAGAAGATTACCGCAAGTTCATCAACTTTTTGAACTTGTTATGGAGATAATCTCACTGAACGTTGTGCCCCAGTGCTCTGTGGTTACTTGGAGTAGTAAATTAGCAACGAAAAGATTGGTCCCAAATCGGTCAAGTTTGTTATTCTCAGGGGTCAAAAAATCCAGACTTGTGATTCGAAGTGGAAATTCCGATGGTTATGTTGTTGGTGAGAATGATGACTTGGGTCGTATAGCCAGAAGAGGAGAATCAACGTCAAAGGTTTTGATTCCTGGTTTGCCTGATGAATCAAATGGTGAAATTGCTGCTCGAATCAGTCATTCTCACTGCGAGTGGAAGCCCAAGCTTAGAGTACATTATGAGAAAGCCGGTTGTGACAATCTCGATGCTCCTGCGGTGTTGTTTCTTCCTGGCTTTGGCGTTGGTTCATTTCACTATGAGAAGCAGCTTACCGATTTGGGAAGGGATTATCGAGTATGGGCTATTGATTTTCTTGGACAGGGTTTATCTCTCCCTACTGAAGATCCTACTACCATGACTGAAGAAACCAGTTCCTCGGAAGATAAGGAACCATTTTGGGGATTTGGTGACAAAACTGAACCGTGGGCTGATCAACTTGTATTCTCTCTGGATCTCTGGAGGGATCAAGTTCAGTATTTTGTAGAAGAGGTTATCGGTGAGCCTGTGTACATTGCAGGGAACTCACTTGGAGGGTATGTAGCTCTCTACTTTGCAGCAACCCATCCTCACCTGGTTAAGGGTGTTACCTTGCTTAATGCAACACCTTTCTGGGGTTTCTTCCCTAATCCAGTAAGATCCCCAAAGCTAGCACGTCTCTTTCCATGGCCCGGAGCATTCCCTCTGCCGGAAAGAGTGAAAAAAATCACAGAATTGGTGTGGCAAAAGATAAGTGATCCTGAAAGCATAGCTGAGATACTTAAACAGGTCTACACAGACCATTCTATCAATGTGGATAAAGTATTCTCACGTATTGTGGAGGTCACACAGCATCCGGCTGCTGCAGCATCGTTTGCTTCAATCATGCTTGCTCCTGGTGGAGAGCTATCTTTCTCCGAAGCTTTATCTAGGTGTAAGGAAAACAATGTTCAGATATGTCTCATGTATGGAAGAGAAGATCCATGGGTGAGACCGTTATGGGGAAAGAAGATAAAGAAGGAAATCCCCAACGCTCCATACTACGAGATCAGCCCAGCGGGTCACTGCCCACACGATGAAGTCCCTGAGGTATAATGAACTAGTCAATAAATTCTTCAAACTCTGCAATTAGGTATAATGAACCCACCATTTGGGATATGAAAACGAGCAGGTGGTGAACTATCTGATGCGCGGGTGGATCAAGCACCTGGAGTCTGGTGGTTTTGAAGCGCTCCCGCTTTTGGAGGACACTGAAGAAGATTGGGAGGAGTCCAGGATTGGTAGAGAAATTGAGTTCCCGAGAGATGGTTGGAAAAAAGCAGTGAATCTGTGGTTATATGGGTCAAACTATACGTACTGGAGAGGAGTTAGAGAATCTTTCAGATCCAGTTTTATAAGGGTGTTTGGAGGGAAGTCTGCATAGAAGAAGCATGGAACAGTCGTCTAGTGTAAATTAATTGTAATCTATGTTGCATCCGATGCTAGCTATATAATGTTGTCTGTAGAATCAAGTTTCTAAAATGTTCAAAAGGAAAAGTTAGAAAAATATCTACTTGATAGTTAGTCACCTAAATCGAAGGAACTCCTTTCTTGCATTGTTGTATATAATCCACAGGTTCAGATTAATATAGGAAGGCGACATTGCAGGC - >AT5G13800.2
CTTTAAGAAAAAATAAAAACTCGATAAAAACGTTGCTGTCGGTTTGCACCGAACGATTGAAGTTAACCAAGCCAGCAAGCAACCCAATTCTTCTATTTCTTCTTCACCTTTAGATTTTTCCTCGCTTAATTTCTCAATAACGCTCTCAGAGAGACCATTTGATGAAGCTTCTCGCTTCTGGAATTTGAAAAGGATTTGATAAGACGAGTTCATAGAAGATTACCGCAAGTTCATCAACTTTTTGAACTTGTTATGGAGATAATCTCACTGAACGTTGTGCCCCAGTGCTCTGTGGTTACTTGGAGTAGTAAATTAGCAACGAAAAGATTGGTCCCAAATCGGTCAAGTTTGTTATTCTCAGGGGTCAAAAAATCCAGACTTGTGATTCGAAGTGGAAATTCCGATGGTTATGTTGTTGGTGAGAATGATGACTTGGGTCGTATAGCCAGAAGAGGAGAATCAACGTCAAAGGTTTTGATTCCTGGTTTGCCTGATGAATCAAATGGTGAAATTGCTGCTCGAATCAGTCATTCTCACTGCGAGTGGAAGCCCAAGCTTAGAGTACATTATGAGAAAGCCGGTTGTGACAATCTCGATGCTCCTGCGGTGTTGTTTCTTCCTGGCTTTGGCGTTGGTTCATTTCACTATGAGAAGCAGCTTACCGATTTGGGAAGGGATTATCGAGTATGGGCTATTGATTTTCTTGGACAGGGTTTATCTCTCCCTACTGAAGATCCTACTACCATGACTGAAGAAACCAGTTCCTCGGAAGATAAGGAACCATTTTGGGGATTTGGTGACAAAACTGAACCGTGGGCTGATCAACTTGTATTCTCTCTGGATCTCTGGAGGGATCAAGTTCAGTATTTTGTAGAAGAGGTTATCGGTGAGCCTGTGTACATTGCAGGGAACTCACTTGGAGGGTATGTAGCTCTCTACTTTGCAGCAACCCATCCTCACCTGGTTAAGGGTGTTACCTTGCTTAATGCAACACCTTTCTGGGGTTTCTTCCCTAATCCAGTAAGATCCCCAAAGCTAGCACGTCTCTTTCCATGGCCCGGAGCATTCCCTCTGCCGGAAAGAGTGAAAAAAATCACAGAATTGGTGTGGCAAAAGATAAGTGATCCTGAAAGCATAGCTGAGATACTTAAACAGGTCTACACAGACCATTCTATCAATGTGGATAAAGTATTCTCACGTATTGTGGAGGTCACACAGCATCCGGCTGCTGCAGCATCGTTTGCTTCAATCATGCTTGCTCCTGGTGGAGAGCTATCTTTCTCCGAAGCTTTATCTAGGTGTAAGGAAAACAATGTTCAGATATGTCTCATGTATGGAAGAGAAGATCCATGGGTGAGACCGTTATGGGGAAAGAAGATAAAGAAGGAAATCCCCAACGCTCCATACTACGAGATCAGCCCAGCGGGTCACTGCCCACACGATGAAGTCCCTGAGGTATAATGAACTAGTCAATAAATTCTTCAAACTCTGCAATTAGGTATAATGAACCCACCATTTGGGATATGAAAACGAGCAGGTGGTGAACTATCTGATGCGCGGGTGGATCAAGCACCTGGAGTCTGGTGGTTTTGAAGCGCTCCCGCTTTTGGAGGACACTGAAGAAGATTGGGAGGAGTCCAGGATTGGTAGAGAAATTGAGTTCCCGAGAGATGGTTGGAAAAAAGCAGTGAATCTGTGGTTATATGGGTCAAACTATACGTACTGGAGAGGAGTTAGAGAATCTTTCAGATCCAGTTTTATAAGGGTGTTTGGAGGGAAGTCTGCATAGAAGAAGCATGGAACAGTCGTCTAGTGTAAATTAATTGTAATCTATGTTGCATCCGATGCTAGCTATATAATGTTGTCTGTAGAATCAAGTTTCTAAAATGTTCAAAAGGAAAAGTTAGAAAAATATCTACTTGATAGTTAGTCACCTAAATCGAAGGAACTCCTTTCTTGCATTGTTGTATATAATCCACAGGTTCAGATTAATATAGGAAGGCGACATTGCAGGC
CDS Sequence
Protein Sequence